Array 1 46105-44487 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANQW01000023.1 Streptococcus agalactiae GB00919 ctg7180000001609, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 46104 36 100.0 28 .................................... GTCTTCAGGTGTTATTCTTGGGTCTTCT 46040 36 100.0 30 .................................... AATTTAAAATCTTCATCTTCTATACGTTTG 45974 36 100.0 30 .................................... TTGGAAAAAACACGAAAGTGATATTACTTT 45908 36 100.0 30 .................................... TAAGAATTTTAGATACTCTACTTGAATGCT 45842 36 100.0 30 .................................... AAGACTTAAAATCGATTAGAATTGATTTTA 45776 36 100.0 30 .................................... CCAGTTTAGAAACAGAACAAAACTAACGAA 45710 36 100.0 30 .................................... AGACAAAGAAGATGGCAAGTCTATCAACAA 45644 36 100.0 30 .................................... AGTAGAAACATAACGATAATTCCATGAATA 45578 36 100.0 30 .................................... ATGTTGTAGAATCATATCGACCATATAACC 45512 36 100.0 30 .................................... GCTTGGTCTCGAAGAATTACAGAAGAACAT 45446 36 100.0 30 .................................... CAATTGATTGCCGTTAAAACCGATAGAGGA 45380 36 100.0 30 .................................... AAATTGCTCTATCAGTCAATAAAGCAAGAT 45314 36 100.0 30 .................................... TCATATTGAGTGGTTGTTTAATTAAATTGA 45248 36 100.0 30 .................................... TGAATTCCACGCCACCAAGTAAACCTGTGA 45182 36 100.0 30 .................................... ACAAGAAACAAACAGCCTTGATGACTTAAT 45116 36 100.0 30 .................................... AAAAAGCAATGGAAGCTAACGAGATTGCTA 45050 36 100.0 30 .................................... CAACCCTATGTTTGATAATATTTTAGACGT 44984 36 100.0 30 .................................... AAGTGAAGTTGAATTTTATTTGAGATACTA 44918 36 100.0 30 .................................... TAATACTTTTACAATATGTGTTTTCACTAC 44852 36 100.0 30 .................................... AAGTGCCACAGTTTGTGGCTGATTGGATTG 44786 36 100.0 30 .................................... CATTCAAGGACTACCCTCAACAGTAACTCT 44720 36 100.0 30 .................................... TTCTATCTTCTGAAGATATTTCACAAGTGA 44654 36 100.0 30 .................................... TCAGCGAGATGCTCTAAGTAAGCATGTTGA 44588 36 100.0 30 .................................... TCTTCTTTTTAATTCTTCTAACACTCCATC 44522 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 25 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : ATCTTCTTTTGACCTAACAAAAGGATATGTGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGCTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //