Array 1 10588-10260 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAACML010000066.1 Vibrio cholerae strain 2012EL-1760 48382_529_Vc_PivertFAT1Mar_, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
     10587	    28	 100.0	    32	............................	ATCAGGATAACCAGATTCATAAAATCCAGTAC	
     10527	    28	 100.0	    32	............................	TGATGGCTCAACGCCTGAAAAACCGACTTTAA	
     10467	    28	 100.0	    32	............................	TAAAGTCCATCGCTCTCGGTGTGGAAATGTTC	
     10407	    28	 100.0	    32	............................	TTGAACGCACGCCATTTGCGTGCCGAATGATG	
     10347	    28	 100.0	    32	............................	TGAACATCAGTTGTGGACTTTCCAACCGGTGA	
     10287	    28	 100.0	     0	............................	|                               	
==========	======	======	======	============================	================================	==================
         6	    28	 100.0	    32	GTTCACTGCCGCACAGGCAGCTTAGAAA	                                	       

# Left flank :   CTTTGGATATCTCCTTCGATTGGCGGCTACGATGTTTCTGTCAGTGGTAAATCATTAGAAAATGAGTTAGTACCGACTCTAACATCATATTTTGGTCGTGGTCCTGATGGTTATAAGCAAAAAAATGCAAACAAAGGCTTTAAGCATCAACCGTTTTGGAGAACAAAGGACTTCCAAGATGTTCAAGCTGTATGTGAAATGTATGTAAAGACAGCTAAGTAAAAAATCACATAACAAACGCCTCAAGAGGGACTGTCAACGCGTGGCGTTTCCAGTCCCATTTAGCCGCGGTGGTTGCAGTTGTTGTGTTTGAGTTTGGTGTTATGCGTTGCCAGCCCCTTAGGCGGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAGTTTTAAGTTATTGATTTATATTGATAATAAATCTAGTAAAAAATAAAAGGTTATTTTGGGAAATTTGATGTAATTACTATTATTAACAATAGGTTACTGCTAAATTTTTATA
# Right flank :  TATTTATAACTTTGGCATTTGGGATCGGCCAGTTAACAAACGCCTCAAAGGGACTGTCAACGCGTAGCGTTTTCAGTCCCAATGAACCGCGGTGGTTATGGTTGTTGTATTTGAGTTTAGTGTTAATGCGTTGCCAGCCCCTTAGGCGGGCGTTAGCTTCTTAAAGGCTAAAATCATCAAAATCCCAACTTCTTGTCCTTAAAAATCAGCTTTTAGTGTTCAAATTGCACAATTTGGCATTTGAATTTTGCTAGATGCTGATTTGGTAGAAAGTGCTGGAAGTTCCGCAATTTCAAAGCCGCTGAAAGCCAACAAGTCTCGATGCTTCAAAGTCGTTGGATGTTCAATTCGGTCAACTTGGTTTCACAAAAAGCAGCATCGTCGCTGAAATCGTGCTTCTTTGTCGGAAATGCGGTAAGTGGCCAACTTAACCTTGAACGCTGCAAGTTTTGGCAGCTCACTTCACAGCTTTTGGCGTTGGACGTGTGTTTGAGTGATGC

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGCACAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [6,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [56.7-80.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.41,5.51   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
//