Array 1 46905-45783 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCKM010000021.1 Bacteroides uniformis strain DFI.6.25 BBNFDFIL_21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 46904 47 100.0 30 ............................................... AGTTCGGTAAGATGGATAAGGGCGCGGATA 46827 47 100.0 30 ............................................... TTTGCACGTGTTACAGCAAAACAAATTATA 46750 47 100.0 30 ............................................... TCGTGCTCTATAGCCTTGACCCCCCATCTG 46673 47 100.0 30 ............................................... GTAGAGGACGGTGTGTTGGTTATCACCATT 46596 47 100.0 30 ............................................... GTTAGATTTTCAACTATAACAATATCTCCG 46519 47 100.0 29 ............................................... AAGGTATAACACTTTATTTTGGCCGTTAT 46443 47 100.0 30 ............................................... GTGGCTTCGTGAAACCAAGAACCTGCATAT 46366 47 100.0 30 ............................................... GCACATTCAAGGTCTTCCACGGGTATTCCG 46289 47 100.0 29 ............................................... GTTCTGTATCAGTCATTTCACTGACATCA 46213 47 100.0 30 ............................................... GTTCCGGCCTGTGGAAAATGTCGTATTCGC 46136 47 100.0 30 ............................................... CATTTATTCTGTTGCTCCATGAGTCTGTTA 46059 47 100.0 29 ............................................... CACAATGTTTGCGCAACGTTGCGTTCGCT 45983 47 100.0 30 ............................................... TAGAATTTCCAGTATATGATACTTTGAGTT 45906 47 100.0 30 ............................................... AGCTGCGGCATGGACTTTAAGGAGCTTAGT 45829 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 15 47 100.0 30 GTTGTGATTTGCTCTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Left flank : GGGCCTGCTTTCCATATTTCGTCCAGAAACACGACATCGGCTGTGGGCAGATAGCCGTCGATGGCACGTTCTTACTTGTCGGATTCTTTCAGTCGGCTAATGCTGACAGGGCCGAATATCTCGTCGGGCGTAGAGAAGCGGGACATCAGGTATTCAAAGGCACGGGCATCTGTAAAAGCCGACTTTAGCCGCCTGGCTACCATTGACTTGGCTACTCCCGGAGGTCCCAGGAGCAGAATGCTCTCGCCTGCCAGAGCTGCCAGCAGGGAGAGGTTTATTTCAGTTTCTTTTTCGTATACTCCCCGGTTCATTTCGGAAAGGAGGAGACGAATGCGTTGGGTTATTTCCACAATATGATTTATTTATAGTCAGTACTCATGTATAAAGAAAAGTGTGTAAAGATACAAAATAGTAGGGAAATCAGAGAGAGTCTTATTAAGATTTAGTATCTTTGAACCATTGGAAACAGCGTCTTCTGTTTGGGCGATAGGTTCGTACCA # Right flank : TCTATTCCAAAGACAACCTGCCCGAAATACCACGAAAGCTGAGTATCGCAAGAAGGCTGATAGACTGGTGGATGGAGAACAATTAAAAATTAAAGAATTAAAAAGAGGGGGGAAGAAATTTAAAAAAGCAAATTGCGGAAAACACACACTCACAAACGAACAACTACGAATGAAACGACTCTCATTCACATCAACCAATCGGTGTGTAACCGCAATCTGCATATACTAAACTTCCCTGCAAACGTTTTGTTCATCAACCATCGGGTTTAAGTCTTTATTTAAGTTTTCTTTCAACACAGAAGCAAAAAGAAAAGGCGCAGCCCTCACGGGTTACGCCTCTCCAAACACTATATACACATTTTTTCCTCTTTCCTATCAAATGCCGAGTGACTTGCGCACTGCCTCCACTTTCTTTTCAGCTTCGGCATCAGCGCCGGCATAGCATTTCGGACAACCCATCTCGCCCTTCACCTCGATATAGAACTTAATCTTCGGTTCCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTCTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.83%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.70,-0.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //