Array 1 58145-59300 **** Predicted by CRISPRDetect 2.4 *** >NZ_PZIM01000004.1 Staphylococcus haemolyticus strain SNUC 1408 contig004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 58145 36 100.0 30 .................................... ACGTAGAAAGTGGGAAGTGTCAGAAACCGA 58211 36 100.0 29 .................................... ATAACTCGTAATATAACAAGTCATGCGTT 58276 36 100.0 30 .................................... ACGTAAAACAACAGTTAGGTGTAATTAATT 58342 36 100.0 30 .................................... ATTATGAGTAATACAACTTTAATTAAAATG 58408 36 100.0 30 .................................... AGTATATTTAGATTTAATACCATACGGAAC 58474 36 100.0 30 .................................... GTGTCGGGTGATTAACATTATCTTTTTCTA 58540 36 100.0 30 .................................... ATCTTTTTCTGCTAACTGACCTTTCACAAG 58606 36 100.0 30 .................................... TACTGTACAAAATGAACAGTGCAGTCATGA 58672 36 100.0 30 .................................... TTCACGCGTTACACCTAAAAGCATTACCTA 58738 36 100.0 30 .................................... AAAGTGGTTATCCTGAATGGATTATCCCTA 58804 36 100.0 30 .................................... TTGTTTATCATCTTGGATATCTTGGTGGCC 58870 36 100.0 30 .................................... AATTTTGTTTAGTCAAGAGCCATTTACCTC 58936 36 100.0 30 .................................... TTTGTACATGTCGTCTTACCACATCCATAT 59002 36 100.0 30 .................................... CGCAGTAGGTACATCGAATTGCATAGGCGT 59068 36 100.0 30 .................................... AAGATGGTCGTTCAAGTAGCTATGAATCAC 59134 36 100.0 30 .................................... AAGTCAAACAACAACCTTATTTTGAAGTAT 59200 36 100.0 29 .................................... CAACTTTGTTTGATCAATCATAGTTTATC 59265 36 77.8 0 .................C........C..A.ATTTA | ========== ====== ====== ====== ==================================== ============================== ================== 18 36 98.8 30 GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAGAC # Left flank : CGATACAAACATAATTGTATTAACAGGATCAAAACATTTCCTATCTGAAGAGTGGAAATACAATAACTATATTAGAGATGGGAAACAAAAAAACACATCTGAATTTCTAGAAGAATTAGAGTGGAACGCGCCACTTGATTTTGATAAGAAGGATTTAGAAGAAAGTTTGAACCGATTCATTTTAACTTATCAAGATAAATTAGAATTATATCCCATAATATCAAACTATCAAATAGCACAAATTATGTTATTTAATGCCATAGATATATATGTTGGGATTTCATATATGCAACATTGTAATCATAAATTTAAATTAAAAATCAAAAGTGAATTGCTGCCTAAAAGCATCAATAAATATTTAAATCAACAATTGCTGAATTAATTACTTTACTATAATTAACTTAATAAATTATTATTATCTTAGTGAATGAGTTTAGCTAACTTGTTCACTAAGATACCTTTTTTTGAACTAATTCTTTTAGCGATTAATATTGCTAGAG # Right flank : AAATTAATGATTACTAAGTGCTGTTACTTGCTACTTTTATTATCATGATCAATCAATTGATCAAAAGTATAGAAATATTTAAATTTAATAAAAATATTAGTTGACTAAGCATCCATGATAGCAATATAATTAATTTATAGAACAAGTTTAGCTAACTTGTACTTATACCTAAAATTACAGAATCTACTAAAACAAGACTTTATGTCGTGTTTATCCCATTAATTTATTAATGGGATTTTTTCTTTTTAATTAGACAAATCGCCAACGATGATGACTATCGTTGGCGATTATTTTTGTTTAATGTCACTTAATTACACATTATCATCAGTAATTTGACCAATCCAATAACTCGCTGCAAATCCAATGATTAAAGTGATGATTGAAAGTGTCCACTCAATACCAGTTTGAGGAAGACCAGGGAATACAGCATATATGGAGCCAATAACGAATCCAGTTATTAATGCGAATGTGGTATAGAAGTGATGATGTAGGAAGTATTT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.60,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //