Array 1 678014-679963 **** Predicted by CRISPRDetect 2.4 *** >NZ_UHEY01000001.1 Streptococcus agalactiae strain NCTC11242, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 678014 36 100.0 30 .................................... AAAATCATGTACCCATTTTCTTTAAGCGAT 678080 36 100.0 30 .................................... AATGAAAATAAAAAATGAAAGGACACCCCC 678146 36 100.0 30 .................................... TGACAGATGAAACAAAAAAAGTCTACCTAA 678212 36 100.0 30 .................................... ATGATATCATCGGCTTCATAATGTTCCAAT 678278 36 100.0 30 .................................... CTGCTACTAACTCATCTGGTGTAACTTGTT 678344 36 100.0 30 .................................... TTGACCTGTTTCATTCTCTGGAACTTGTTG 678410 36 100.0 30 .................................... AATTTGATTTTTTAGCATAGTATAGCTTGT 678476 36 100.0 30 .................................... TTGGAAAAAACACGAAAGTGATATTACTTT 678542 36 100.0 30 .................................... TAAGAATTTTAGATACTCTACTTGAATGCT 678608 36 100.0 30 .................................... AAGACTTAAAATCGATTAGAATTGATTTTA 678674 36 100.0 30 .................................... AAGACTTAAAATCGATTAGAATTGATTTTA 678740 36 100.0 30 .................................... AAGACTTAAAATCGATTAGAATTGATTTTA 678806 36 100.0 30 .................................... AGACAAAGAAGATGGCAAGTCTATCAACAA 678872 36 100.0 30 .................................... AGTAGAAACATAACGATAATTCCATGAATA 678938 36 100.0 30 .................................... ATGTTGTAGAATCATATCGACCATATAACC 679004 36 100.0 30 .................................... GCTTGGTCTCGAAGAATTACAGAAGAACAT 679070 36 100.0 30 .................................... CAATTGATTGCCGTTAAAACCGATAGAGGA 679136 36 100.0 30 .................................... AAATTGCTCTATCAGTCAATAAAGCAAGAT 679202 36 100.0 30 .................................... TGAATTCCACGCCACCAAGTAAACCTGTGA 679268 36 100.0 30 .................................... ACAAGAAACAAACAGCCTTGATGACTTAAT 679334 36 100.0 30 .................................... GGGTCCAAATCAGCAATCTATGCTAAAAAT 679400 36 100.0 30 .................................... CAACCCTATGTTTGATAATATTTTAGACGT 679466 36 100.0 30 .................................... AAGTGAAGTTGAATTTTATTTGAGATACTA 679532 36 100.0 30 .................................... AAGTGCCACAGTTTGTGGCTGATTGGATTG 679598 36 100.0 30 .................................... CATTCAAGGACTACCCTCAACAGTAACTCT 679664 36 100.0 30 .................................... TTCTATCTTCTGAAGATATTTCACAAGTGA 679730 36 100.0 30 .................................... TCAGCGAGATGCTCTAAGTAAGCATGTTGA 679796 36 100.0 30 .................................... TCAGCGAGATGCTCTAAGTAAGCATGTTGA 679862 36 100.0 30 .................................... TCTTCTTTTTAATTCTTCTAACACTCCATC 679928 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 30 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CATCTTCTTTTGACCTAACAAAAGGATATGTGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //