Array 1 40068-38117 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACWNJ010000011.1 Ralstonia pseudosolanacearum strain NCPPB 216 NCPPB216-PB17_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 40067 36 100.0 30 .................................... AGCCGGGCAAGGCATCGCCGTTTGGCAATC 40001 36 100.0 30 .................................... TGATCGCGTCGGCCTTGGGCTTTTCTGGGA 39935 36 100.0 30 .................................... ACCATCGGCCAACTACTCGACCTATTGCGC 39869 36 100.0 30 .................................... CATGACCGCCTGCAGGTTGTACAGCGGCGG 39803 36 100.0 31 .................................... CGAACGCCCCGACCGATGCGTGGGCGCTGGC 39736 36 100.0 30 .................................... ATAATTAGGCCCTCAGATATCGGCGGCCCG 39670 36 100.0 30 .................................... AACCGGCAGGTTGCAATCGCTATTGGCAAG 39604 36 100.0 30 .................................... GAAGTTGCAGTCGGGGGCGTTTCTTGTAGG 39538 36 100.0 30 .................................... GGCCGAGGAGTCCGGCGGCATGCTGCACCC 39472 36 100.0 30 .................................... GGTCTGCTCGGCGTACTCGTTGCGCTGGCC 39406 36 100.0 30 .................................... GGAATCGCTTGCCTTGCGCCCGCGCTTGCT 39340 36 100.0 30 .................................... GTGGAGGCCGTGGAAGTAGCGGCCGAAGTG 39274 36 100.0 30 .................................... AGGATATTGATGCTGTTGACCGTCACTGTG 39208 36 100.0 30 .................................... GCCGCAGCCCAGTGATGCGATCGATGGTCT 39142 36 100.0 30 .................................... ATAATCCTATTGCGCTTTCATGTAGTATTC 39076 36 100.0 30 .................................... AAACACGTCTCACTCCTGTGCGGCGCCTAC 39010 36 100.0 30 .................................... TGACGGTTCTATTGACGGTTCTTTACGGTT 38944 36 100.0 30 .................................... ATGGTTGGGAACACCTGGCAGCCGATCAGA 38878 36 100.0 30 .................................... AAGAATGAGCCTGCATCGATGCTGCCAGGT 38812 36 100.0 30 .................................... CCAACAATGTAGACCTTCGAAACGCCAACA 38746 36 100.0 30 .................................... GGGGCACCAATCGCGCCTAGGGCGCCGCTG 38680 36 100.0 30 .................................... AGTCTTCGTTAGCATCCATCTGCATTACTC 38614 36 100.0 30 .................................... TCGGCCCGCGTGTTGAGCGATTGCACCGCC 38548 36 100.0 30 .................................... AGATGGGCGGCGCCCCATGGCTGAACCCAG 38482 36 100.0 30 .................................... TCCTGCTGCGTGGGGGCGGCGGCGATCATG 38416 36 100.0 30 .................................... AGAGGAACAAGAGGCCATCTGCGTGGCACT 38350 36 100.0 30 .................................... TGGTTGCGTGTTGTCGAGATCCGCGCGGCC 38284 36 100.0 30 .................................... ACGCCCCATGTTTGCTGTAGCAGGCGCGAC 38218 36 100.0 30 .................................... CGAAGACGCGGCGTGCCAAAACCGATGCCC 38152 36 97.2 0 ...........G........................ | ========== ====== ====== ====== ==================================== =============================== ================== 30 36 99.9 30 AGGTTAGCAGATCGGGAATTGCGCTCTGGCTACAAC # Left flank : GGTGTGCAACGCAGGCAGGACGACTTGCAGGTCCTGTGCTCGACGGCTCAGCGTCGTGTAGTTGGGAACCGGCAACTCAGGATAGGCAAGCCTGCGCAGGCTCATGGCAAAGCCTTGCAGTGCGCGCAACGGCAGGTGGAAGACTTGCTTCAGACCGAGCAGGCCCTGAATCAAAGCGTCCGAGTAGACCAGCGGGTGGCCGCGCTTGCGGGCCTGCGCAGCAGATGCCTTGCACATACCCTCGTCGATCCACATCGTGACATCTCCTCTGGCGATCAGCCCTGCGTTGTAATGCGCCCAGTTCTTGACGCGATACGTGGCCTTGGGCTCGGCTTGCTTGTGGGTGTCCCTGCGCATGTTCCCGGCAAAAATCGAGAATCTACGCAGGAACCCGGTTTGTTTACAGCGTTACCGCCATGTTGTTGCGCGTAAACGTCAGCACGGCCTCACCACGACCCTGATTTATGCAACAACGCCGTGGCGCATCCACACTGAGCCCG # Right flank : GGCCGTTCGCGTTCGGTTGCGGGCAGGGCGGGATTCCACTTTCATCCGAAGATCAGTTGATCGCGAAACGGCGCACTCCAAGCAGCGCGATTGCGCTTGCTGTTGACGCTCTCCTTGGTCTGCTGATGCTGCCTGATCACGCTGAGCGCGATGCGGTTGATCAGGGCGACATGCTTGGCGCCCTCCGGGTCAGTGATCGCGGTGGCATCCTCCTTGAAGGCCACATCGAGCACCCAATGCAAGCCATTCTCGATCTGCCAGTGATCGCGGATGGCTTGCGCCACACGCTGCGCGTCGATCTCCAGCGAACTGACGTACCACCGTGAATCGAAGTAGGTCTGGCCTTTTTCAGTGCGCTCGCTGCTCACCTCGATCAGACTGCGAATGGAGGGCCAGCGTGTTTTCAACTCCGGTGGCAAGTGCGTGGGGATTTGCATCACGACGCGCCTCTCCTCCCGGCCATGGCCGCGATTAACTTGCTCGTGGGTCGCCGTGCCACT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGGTTAGCAGATCGGGAATTGCGCTCTGGCTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.20,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 2 42726-41238 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACWNJ010000011.1 Ralstonia pseudosolanacearum strain NCPPB 216 NCPPB216-PB17_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 42725 36 100.0 30 .................................... GGCAAGCTGCGCAATATGCATGGCTCGCCG 42659 36 100.0 30 .................................... ACGCAGTGCGAGCCGATGCTGGCGAACGCG 42593 36 100.0 30 .................................... GTGCAATGACATCTGTGCAGGCTGATCATT 42527 36 100.0 30 .................................... GCCACGGGCTACCGGTACGCTGTCGTGAAG 42461 36 100.0 30 .................................... GACATGGTCGAGGCCGACGCCGACGCCGAC 42395 36 100.0 30 .................................... CGCGGCATCGGCTGACCGACGTACGACTCG 42329 36 100.0 30 .................................... GCATTCCGCTTTCCAGCAAGGCGCTGAACT 42263 36 100.0 30 .................................... CCAGAGATCTCCACGCCGAGGCCTAGGCGA 42197 36 100.0 30 .................................... GACGAAGGCCCACTGCGCGTCATTCACGCC 42131 36 100.0 30 .................................... GCGGTGCTGACGCTGAGGTGCGACATCTAC 42065 36 100.0 30 .................................... AACATCTGATTGAGCGTGGCGAGGCCGTCT 41999 36 100.0 30 .................................... TCACCATGCGATTGATGTACTCAGGAAGGC 41933 36 100.0 30 .................................... CGTATAGCGGATGGCGCGCGCCACGTTGTC 41867 36 100.0 30 .................................... ACAGCCGCTGGCGGCGCTATTGGCGCTCAC 41801 36 100.0 30 .................................... GCAAGTGCGATGTCCTCCATATCGACGTAC 41735 36 100.0 30 .................................... AGCGCCGGTATCTGCCACAATGCTATTCGC 41669 36 100.0 30 .................................... AGTTTCAGCTTCGTACGCACGGATGTTCGT 41603 36 100.0 30 .................................... GGGCCGCGTGATGATCAACAAGGTCAATCC 41537 36 100.0 30 .................................... TGAAAAGCCGTCATCAAGAAGAAAGAAGGA 41471 36 100.0 30 .................................... TAGCAGCTCCTCGGCCAGCGCGTTGCATGC 41405 36 100.0 30 .................................... AGCAGCGCCCTTTGGGGGGACTATGTTTGG 41339 36 100.0 30 .................................... CAGAAGATCAGCGAGCAATACGAGTCGGGC 41273 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 100.0 30 AGGTTAGCAGATCGGGAATTGCGCTCTGGCTACAAC # Left flank : GTGCGAATGGAAGGAGGCTAGCGGCTACCACCGGCGCTCGCTGGTGGAGAACCTGATGTACCGGCTCAAGACGCTCACCGGTCCGTGCCTGTGGGCGCGCAAAGTTGACTCCCAGGCAACCGAGGTTTCGATTCGTGCGGGCGTGCTCAACCGCATGGCGGCTCTCGCTCGCCCGCACTCCGTCCGTATCGCCTGAATTCAAGATCATAGGTGGACCTGTGTCTTCAAATTCGATTTATGCAACAACGCCGTTCTGTACAGGAAGGGAACAGGTGGATACGCTGTGCAAGCGTATCCACGAAGCACTGCCAGGCGGTGGCAAGGTCGATATCTTATGCATCACCGATAAGCAGTATGAAAACATCGTCAGCTTTGCTGGCAAGGTCAAGCAGGCACGGAAAAATCCGGACCAGTACACACTGTTTTGACACCATGCGCGTAGTTTTTCTCGTTTGCCTGAATGAAATTCTCCTTTTGATTCAATGGGTTGTGTGTGTGCC # Right flank : CGAACATGTGGCGCATGGCGTTGTTGCATAAATCGAATTTGAAGACACAGGTCCACCTATGATCTTGAATTCAGGCGATACGGACGGAGTGCGGGCGAGCGAGAGCCGCCATGCGGTTGAGCACGCCCGCACGAATCGAAACCTCGGTTGCCTGGGAGTCAACTTTGCGCGCCCACAGGCACGGACCGGTGAGCGTCTTGAGCCGGTACATCAGGTTCTCCACCAGCGAGCGCCGGTGGTAGCCGCTAGCCTCCTTCCATTCGCACCTGCTGGTCTTGGCAATGGCGTCGATGGCAGCGTTGCGCCATGCCGCGCCGGGCGTGACTTCAGGCCACGAACTTGCACCTTCGCGCGGTGGAATCGAGGGCCGCGCACCGCGCTTGGCAATCGCCGCATGGCACTGCTTGCTGTCGTACGCGCCGTCCCCGCCGACGATGTCCACGGATATGTCGGGCGGCAATTGGTCGAGCAAGTCGGGCAGCACGTCAGCGTCGCCCACA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGGTTAGCAGATCGGGAATTGCGCTCTGGCTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.20,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA //