Array 1 2244-3665 **** Predicted by CRISPRDetect 2.4 *** >NZ_WMBF01000187.1 Streptomyces sp. BG9H NODE_187_length_12034_cov_9.36726, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================= ================== 2244 29 100.0 32 ............................. TGTCCCACCCGCTGCCAGCTGTGAGTGGTGAG 2305 29 100.0 32 ............................. ACAGGGATCACCGCGTGCATGGCTGTGCCCAG 2366 29 96.6 32 ............................T TTCGTCTAGTCAGGAGGCCTCTCTGGGTCCCG 2427 29 100.0 32 ............................. AGGGTCGAGGGCGGGTGCTTGGAGTAGTTCAG 2488 29 100.0 32 ............................. CTGCCCGGGGTCGGCGACGAGGTCCAGGTCCA 2549 29 100.0 32 ............................. TACAACCAGATCGCCAAGGTGCTGAACTCGGA 2610 29 100.0 32 ............................. GCTGATCCCCAGAGCAATGGCCCGTGCCTGAA 2671 29 100.0 32 ............................. GCCCACTTACCACTACAGGAGTTACACCTCCG 2732 29 100.0 33 ............................. GTCACCATGACGTCCCCCTCCCTGTTCCGGTCG 2794 29 100.0 32 ............................. ACGGCCGCCACGGCCCGGATCACATGACCTCG 2855 29 100.0 32 ............................. GGCGCGGGGCGGACCGCGGTCTCGATCTGACG 2916 29 100.0 32 ............................. TTCTGCTGTCCGGGCCGGGGGGACACGATGTC 2977 29 100.0 32 ............................. GCTGGGGTCGGCGACGGCCTTGAAGGCAGGTG 3038 29 96.6 32 .........................C... ACATTGTACTCAGCTTCCGCAAGGAGATCCCG 3099 29 100.0 32 ............................. GAAGCTCTCAAGGCGACGGGCTTCTGCAAGGT 3160 29 100.0 32 ............................. GTGCAGACGGTGAACAACATGCAGCGGCTCCT 3221 29 100.0 41 ............................. CTGTGGCCTCCCGGCACGACCGACTGCGTACTGGCGACCTG 3291 29 100.0 32 ............................. TTCGCGATCAGCTGCGGAAGCTGGAGCACCTG 3352 29 96.6 32 ............................T CGAGAGTCCGACCGGGACAGCACTTGGTCTGG 3413 29 100.0 32 ............................. TTCTCGTCTTCCCAGGACCCCCCGCGCCCGCC 3474 29 100.0 32 ............................. CTCCGTGGTACATCGCGCACACGCAGCGGCAG 3535 29 89.7 8 ........................A.G.T GCGGGCTG TCCC [3557] Deletion [3572] 3576 28 86.2 32 ..C.A.T...-.................. CGAACCAAGACCAGCTCGCCGACCTGGACCGT 3636 29 79.3 0 .C........TCTG.......A....... | A [3661] ========== ====== ====== ====== ============================= ========================================= ================== 24 29 97.7 31 GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Left flank : GGCACAGAGGAATCGATCTGGTGACGGTCATCGTGCTCGCCAACTGCCCCGCCGGACTCAGAGGGTTCCTCACTCGCTGGCTCCTGGAGATCTCCCCCGGCGTCTTCCTGGGCGCTCCCACAGCTCGCGTACGAGACATCCTGTGGGCAGAAGTACGCCAGTACTCCGGCCAGGGCCGCGCTCTCCTGGCCTACCAAACCGACACCGAGCAGGGCTTCGCCTTCAAGACCCACGACCACGCCTGGAACCCGGTGGACCACGAAGGCCTGACCCTGATCCACCGCCCGTCCCCCACCGCTCCTCACCCAGATGCCAGTCAGCCGTCACCACCTCGCTCGGGATGGAGCAAGGCGTCGAAGCGACGACGGTTCGGCGGCTGACAACTACGGCACACCTGGGCTTCCCACACAGACACGAAGCCCCATTTACGCCCTATGTCGAAATCTTGGATAGTAAGCAAAAGCGGGCACCCCTGCCCATAGACATGCAGGTCACTCACC # Right flank : CGAATGCGTCCGCCGGCAGTCAGGCGCGTACGTCCCGCTGCTGCACTTCCTTGAGGACCGCCGCCACCGTGGCGAAGTCGTTGTCCACGTGGAGCACCGTGTGGCCATGGTGGGTCGCTGTCGCACACATCAAGAGATCGATGGCGCCGGCGGCGCGGTGCTGCCCCTGCTGGGTGAGCTTGTACTGCGCGGTCTCGACCCAACGCCACGCGTTCTTGGGAACCGGCGAGAACTGGCAGAGAGCATCCAGCTCTTCGGCCAACTCGTCGCGGTGGGCCGGGCTGGTGGCCGAGTAGAGGAACTCCGCCCGCGTGGGTTCGCAGATATGGAACACGCCCGCGGCGATATGCCCTTCCCAGGGCAGCAACGCCCCCGGCGTACGGAAGAGGTGCCAGAGGGCGGAAGTGTCGAGGAGGTACGTGATCACTCGAAGGCTGCCCGCCGGGCGCGCTTCGCGGCCGCATGCGCCGCAGCCGCCGCCTCGAACTCGCCCCGCTCGC # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCATGCGGGGGTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1715-38 **** Predicted by CRISPRDetect 2.4 *** >NZ_WMBF01000690.1 Streptomyces sp. BG9H NODE_723_length_2559_cov_10.0637, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1714 29 100.0 32 ............................. CAGCGCTCCCACAGCTCCAGGTCCCAGTACAG 1653 29 100.0 32 ............................. TCATGGTCCGAGGTGATGATCTTGGCCGCCTC 1592 29 100.0 32 ............................. GGTTCCGTGGTCTGGCCAAGTCCGTGCCGACT 1531 29 100.0 32 ............................. GTCGGGGTCGGCTCCCAGGTCGTACAGGTCGA 1470 29 100.0 33 ............................. CACGACACATGAGTGTGACGCAGGTCGTGGATC 1408 29 100.0 32 ............................. GCGGCGAGCTGCTTCATCTCCCGGGTGCCGGT 1347 29 100.0 32 ............................. CGTGTGGGAGGAGCCGTTCTTCGCCTCAAGGT 1286 29 100.0 32 ............................. GAGGTCAACTGGTGGGACGAGCAGGACGAGGG 1225 29 100.0 32 ............................. AGAACGGCAGCGTTCTTGAGTTCCGGGAATTT 1164 29 100.0 32 ............................. GCGATACGGAAGCCGACCGCGAGAAGCCGCGC 1103 29 100.0 32 ............................. TGGGCGTCGACGAGGACGACTTCGACGACGAG 1042 29 100.0 32 ............................. GGACGGCCGCGGACGAGCGCGAGCGCGGCCTC 981 29 100.0 32 ............................. GACTTGAGTGAAGCGTTCACGAACGAGCTCCT 920 29 100.0 32 ............................. TCCCATTTCCGCGCAGTGCCCACGTTCCGGTA 859 29 100.0 32 ............................. GAGATGTGCGCTGAGCTGGGCGCCAGCAAACC 798 29 100.0 32 ............................. TCCCAGCGTTCTTCCTCGTCCTCGCTGAGCGG 737 29 100.0 32 ............................. TGGGCGATCCCCCGGGCACCGACAGGCGACCT 676 29 100.0 32 ............................. CCCGGGCTGTACTTCCGCGCATCAGTCTGGAC 615 29 100.0 32 ............................. TACCCGGGGACCAGCGGATCGGGGCGGCACCG 554 29 100.0 32 ............................. CCCCGGCCGCCCACGTGAATGTGCACTACAGC 493 29 100.0 32 ............................. GGCCCGGCCGCCCGAGCCCGCTCCTTCCTGAG 432 29 100.0 32 ............................. CAGCCCTGGACGACGCCGCCCTGCGGCATCTC 371 29 100.0 32 ............................. TTGGGCATGGTCAGATCTCCTTTTTCGTGTTC 310 29 100.0 32 ............................. CTTCGCCAGGGCATCAACGACCTGCAGCATGC 249 29 100.0 32 ............................. CGCTTCAACCTCCTGTTGGGGCAGGCACGTGC 188 29 100.0 32 ............................. GCGCCGCGCTTCGGATACGACAGCTCCATCAA 127 29 100.0 32 ............................. CAGCCCTGGACGACGCCGCCCTGCGGCATCTC 66 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 28 29 100.0 32 GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Left flank : CAGGTGCAGCGCAGACGCCACCAGCACCATCAGACCTGCCGCACAGACGGCAGTCTGCTTGAGGCACTAGGCGAGCTCCACAGGCGTGACGCAGACTCGGCGTGCGGGCCTCTCGGCGGACGACTAGGGGCGTGAACGTGTCAGCGCCTGCGAATCCACCTCAAGCCCCGCAGAAGCGGGGAACACGCAAATACCAGAGACCCCCAGGGATCACCCCCGCAGACGCGGGGACCGCACCACGCACGCCAATGCATCAGCGAGCGGCCTGAAGACTCTTCGGACAACTATGGCGGAGCAGCTCCCTTCAGAGTGAGAGGGTGTCCGCTCCCTGTCGGCTTCGCAAGTCCCCAAGGTCGTTCCTAAGCTGCACTCTGGACACCGCAGTAACAAGAGTTCCTCTCATAGGCAGTAAAGCTTGAAGGCAGGTGCCCTAAATGTCGGTTCACGCACTAGTGAGCAAAGTTGACTCCCCCAGCCCGTGAACGTGCAGGTCGCTCCCT # Right flank : CTTGGGCATGGTCAGATCTCCTTTTTCGTGTTCGTGGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCATGCGGGGGTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [31.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //