Array 1 602628-604354 **** Predicted by CRISPRDetect 2.4 *** >NZ_JDTS01000001.1 Bifidobacterium bombi DSM 19703 contig1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================ ================== 602628 37 100.0 28 ..................................... AACCTATCGTATTGCATCAAACTATTAT 602693 37 100.0 28 ..................................... ATACGCAACAAGCTGTGAGTGGTTGTTA 602758 37 100.0 28 ..................................... CCGGCCGACGCCCACGTGCCCGGCATGA 602823 37 100.0 28 ..................................... TTGTTTACTGCATCAGCTGGCGCACGCG 602888 37 100.0 28 ..................................... AGACCTCGGAAACGGTTGGACCGTTCGC 602953 37 100.0 28 ..................................... CGAGCCCTTTGAGTTTGGCTTGTGCGTT 603018 37 100.0 28 ..................................... AGTTCGAAGATGGAATTTCCGGAGTCTT 603083 37 100.0 28 ..................................... CCAGGCAGAAGCATGGTTCCCTCAGGAA 603148 37 100.0 28 ..................................... CCTGGGCACTTCAGGCGGCGGCAAGTCG 603213 37 100.0 28 ..................................... CAGGAAAATCCAGTGTGACCGGCATCTC 603278 37 100.0 28 ..................................... CAAGCTCCGCGTAGTAGTCGATGTCCTC 603343 37 100.0 28 ..................................... CAGCGCACCCTGACGACCAATGCGGCCA 603408 37 100.0 28 ..................................... CCCTGCGGCTGCGCGATCCGATAGCGCG 603473 37 100.0 28 ..................................... CGCGAGTTCGGTTATCTTGGACACAAGT 603538 37 100.0 28 ..................................... CATCGGAATTTGATGGTGCCGCCGATGG 603603 37 100.0 28 ..................................... TGACACGTGGGATGAGCTCACCACAGGA 603668 37 100.0 28 ..................................... CCCACGACCAGGCTCTTGTAACTCCGGT 603733 37 100.0 28 ..................................... ATCATCAGCGCGCGCCCGCGAGGGATGC 603798 37 100.0 28 ..................................... CACAGTATCCGCTCCTGCAACAGGCCAT 603863 37 100.0 28 ..................................... GTTGAAAGACGAGCATGACCAGGGCGAA 603928 37 100.0 28 ..................................... ACCTCACGGTGTAGCCACACGTTGCCGT 603993 37 100.0 28 ..................................... CGTAGGGTGGCCTGATTGGCGGTGCGGT 604058 37 100.0 28 ..................................... TAACGGTCTGTTGCATGTGAGGCTCGCA 604123 37 100.0 28 ..................................... GCGAAAAACTGAAGGTGTTCGCGGTGAG 604188 37 100.0 28 ..................................... CCGTCCGGGTTGAGCAGCCACCGGCCCG 604253 37 100.0 28 ..................................... GCGAAAAACTGAAGGTGTTCGCGGTGAG 604318 37 97.3 0 .........................G........... | ========== ====== ====== ====== ===================================== ============================ ================== 27 37 99.9 28 CCAGTATATCAGAGGGGCTTTAGATTGAATTTGAAAC # Left flank : TCTTTGATGAGGAGGGTGAGACAATACCGACCGTGATGAACCGATTTGCGCAACAAATAGGAAGATACTGCGAAGGAGACATCGATAGGCTCAATGTTCCAAAATGGAAGGCTTTGGACGATGAGATTTGACGAGGAGGATCAAGTGTGGTGTGTAGTCATGTTCGATTTACCTACCAACACCAAGGATCAACGCCGCGCCGCAAGCCTGTTCCGCAATAAGCTGCTTGATGCAGGATATTCCATGATTCAATTTTCCGTCTATGCGAAGTACTCCCCTACCCTGGCCAACAACAGGCAGACCGTTCAGTTCGTAAAAAAGGAGCTTCCAGACTATGGCGAGGTCAGAATCCTACACATCACCGATAGGCAGTGGTCAATGATGCAACGATTTTACGGACGAACCCCGAAAAAGACTGAGCAAAAGCCAGAAGAGCTCGCGCTTTTTTGAACGCAATTGCGCCCTTTATCGTTGAAATAAAGCCCCTTTGATGCTGTACT # Right flank : CAGTTCATCGCCGACATGATCGCCACCTCGACCCGGCTTACGACGCAGCGCAACGTCCGCATCGAACCGACAAGGCCACGCTGGGTGAGAGTGCCACGCGGGTCGAAGACCTGCGCGTTCTGCGTGATGCTGGCGTCCCGTGGCTTCGCCTACCTGTCCGAGGATTTGGCCGGCAGACAGATGCAGTATCATCCGGACTGCGACTGCAATATCCTGCCCAGCTGGGGCAGTCAGATTCTTAAAGACTACGACCCCGATAAATTCGCCGAGATGCACCAGACAGCCAAAGACGCCGCTTCATCCGGCGACTACCGGCAAGTGCTATGGCAGATGCGCCAAATGTATCCAGATCAGGTCAAGGATGGCACCTAGCCTCTTTCCGCCCTTTGGCACACGGAAGTTAATCCGCCCACAAGGACATGGTTAGGATCACGTGTTCGACGGACATGGACCTGGCACCAGGGCACCCAATAAAACGCATTTCCCTGACGATTGGAGTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAGTATATCAGAGGGGCTTTAGATTGAATTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //