Array 1 233-22 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMDI01000314.1 Streptomyces sp. DconLS, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 232 29 96.6 32 ............................T CGTCGTGGAAGACATCGGCAACTACACCAGCA 171 29 100.0 32 ............................. CTGAATATCGCGCTTACCGGTGTGGCCGTGGC 110 28 93.1 32 .................-..........A CCCCAGCTGATCAGCTGGATCTGACGCGTGCT 50 29 75.9 0 .....................TGCT.GAT | ========== ====== ====== ====== ============================= ================================ ================== 4 29 91.4 32 GTCGTCCCCGCGCCCGCGGGGGTAGCTCC # Left flank : CTGTCGGACGAAGACCTCGGCGCCCTCTGGGACGACGGCGACACCGTCGTCAGCAGCGGCCGGAACTGGAGCGCCACACACCACCTCGACGTCATCCCCGAACTCCCAGACCCCGGTACCACGGAGACGACCTCATGAGCGCCGGAACAACCGTCATTGTGCTCATCGCAGCACCACCCGGCCTCCGAGGACACCTCACCCGCTGGTTCGTCGAAGTAGCCGCAGGCGTCTACGTCGGCAACCCCAATCCACGGATTCGCGACCGCCTTTGGAACGTTCTCGCTGAACGCATCCACGACGGCCAAGCTGTCATGATCGAACCAACGGCCACAGAACAAGGCTGGTCCGCACGCACTGCAGGCCGTGACCGATGGACCCCCATCGACTACGACGGCCTCACCCTCATGGCTCGTCCGCGCCAGAACGGACAGCCCTGACGGCCCGCGAACGAAGTAAAGCAAAATAGCTTGATCACCTGACAACACCGCAGGTCACGAAGG # Right flank : TCTTCAATGGGCGATGCCGACG # Questionable array : NO Score: 3.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.57, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCCGCGGGGGTAGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [2,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCGCCCGCGGGGGTTGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [20.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 11195-10858 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMDI01000314.1 Streptomyces sp. DconLS, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 11194 29 100.0 33 ............................. TGGCCGCTCCCGGCCCAGGGAGTGAGTAAGGTA 11132 29 96.6 32 ........T.................... CTGCCTTTGCCCTTGGCCCAGCTGAGACCGTA 11071 29 93.1 32 ..............T.............A CGGCGGTGCCGGGCGGCGCGGAGCTGGTAGCG 11010 29 79.3 33 ......................GTAGCT. AGCGACGCGATCCTGATCGGTGCCAACACCATG 10948 28 69.0 33 ...........A.GA...A....TT-CT. ATGGAGATCCACCGTGTCTGGGTCCGCTACCGG 10887 29 79.3 0 ...........A.GAA.........T..T | T [10863] ========== ====== ====== ====== ============================= ================================= ================== 6 29 86.2 33 GTCGTCCCCGCGCCCGCGGGGGTAGCTCC # Left flank : ATGACCACCCCACACACAAGG # Right flank : TCGGTGAGTTCATAGAGCCCGGTCAGCTCGAGGTCGCCCCCATGCCGCGGGTAGAGACAGAGTTCCTCAAATCCCCTCCACTGGTCGCCTTGGCAGGGCCTCGCCATCAGGCTGATGTACGCAACTCCTTTCTCATCGCTGACCTCAGGCGACTTCAGCCGGCCGGCGGCACCGTCGTCGGTCGCTCTCTCAACGGCTGTCGCCGAGGGGCTGACGGACGGAGTGCAGGCATGGGTGTCAGTGCCAGCGCCTATGGTGCCGGGACGGCCGAACTGAGGGGTGTGTCCGTGGATCATGACGCTTCGATCATCGAGTTGATGAAGGCGATGGGGTTATCGCCCGAGGTCGTCGAGCGAGTGGCGCGGTTGTGGGGGAAGTCTGCTGCGCGTAATGGCGGCCAGACGCACCTGCTCCTCGGGCATCTGCTGGATACGGCTGCTGTGGCGGGGGTGATGTGGGACCGATACCTGTCCGCTGCGTTTCGGGGGCGGTTGGACGAG # Questionable array : NO Score: 5.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.61, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCCGCGGGGGTAGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [2,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCGCCCGCGGGGGTTGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.70,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [35.0-15.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 2443-2971 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMDI01000326.1 Streptomyces sp. DconLS, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================================================================================================================================================= ================== 2443 29 86.2 32 ...........A.G..........AG... CGGATGCGTCCGGGCTGGAGGTAGCCGGTCGC 2504 28 86.2 169 A................-.A........G GAGTGGAACAGACTCTGGCCGGCAACCACCATGCCCCTGGCTTCGGGAAGTAGTTCCGGCCGACCCGACTGGCACATCAGCCTCACCTCGTCGCCCGCGAACGCCCGAGCCGACGAACGAAGTGAAGGAAAATCGTCTGGTCGCGCGGCATCACTGCAGGTCACCAAGT 2701 28 93.1 32 .................-..........G CGCTGTGCGACGACCCCGACATCTACGCCATG 2761 29 100.0 32 ............................. TCACCCTCGGGGCGGTGCGGGGCGGGGCGGCT 2822 29 100.0 32 ............................. AGATGGGTCGCGATCTCCCTCGCGGACGGGTC 2883 29 100.0 31 ............................. CAGGTGTCATGCCACCTTGTCTCCTAGGGGC 2943 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ========================================================================================================================================================================= ================== 7 29 95.1 55 GTCGTCCCCGCGCCCGCGGGGGTAGCTCC # Left flank : CGACAACGCGCATGATCACACCAAGGCCGCACCGCTGTCGCACCAGCCGTCGCTGGTCGGAAAGCCTTCAACCCGCCACACCACCAAGGACGTTAAAGAACAAGCTCACTGGAACACCCCTGCGTCGGCGGGGAGGACTGCCAGCGCACCCGCCAGGGGGTGGTCATCGACGCCGCCTTCACAGCGCGGCGGGCCGCCGAGCGGATCCGTGACGAGCGCCGGGTCAGCGCCCGCCGGCGTCTTCTCGTGAGCGAGGAAGCCGAGAACGGGGCCGGCGCGGTCTACGACAGCGTGCTGCGCCGGCAGCCTCGCGGACACCAAGCCGCGGAGAGGGCCGCTGATGAGGCCCGCCATCGCACCGCCGATTACCTGCTGCGCCAAAAGCTCGGGCAGCTTCGGGTACTCCGGGCGCGGGGGACGGCGGATCGCGGCCTGCGGCGGACAGGATGAGCAGGTGACGGTGTCAACTGCTGCCGATACCCTGGATGTTGCCGCCGGTC # Right flank : GCGACGCCGACATGGACGCC # Questionable array : NO Score: 3.59 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:-2.41, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCCGCGGGGGTAGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCCCGCGGGGGTTGCTCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [38.3-8.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //