Array 1 23356-23497 **** Predicted by CRISPRDetect 2.4 *** >NZ_RAWC01000124.1 Corallococcus sp. CA049B NODE_124_26343_cov_13.2866_ID_9572, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= =================================== ================== 23356 25 100.0 32 ......................... CGCGGAGGCCGGGCAGGCCCCGGGGGACACCG 23413 25 100.0 35 ......................... TGGGAGGGCCATGTCGGCGGCGTCGGGAGAGGCTG 23473 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= =================================== ================== 3 25 100.0 34 AACCTGTCGGACAGTCGGACAGGTT # Left flank : GAGCCAGGCGCTGGAATCCCTCATCCAGCCCGGGGCCCGGCTGACGGACGTGTCCCTCCTCCCGGCCGAGGACCGCGCCTGGCTGCTGCGCGCCGGCACCGGCGACGTCGTGGACTTCGAGCGCGACACCACCGTGCACGCGCGATTCGAACGACAGGCCGCCGCCACGCCGGACGCGGACGCCCTGGTGTTCGAGGAAACAAAGCTGTCCTACCGGCAGCTCAACGCGCGAGCCAACCGGCTTGCCTGGCACCTGCGGTCGCTGGATGTGGGCCCCGAAGTCACGGTGGGCCTGTGCCTGGAGCGGTCGGTGGAGGCCATCGTCGCGCTGCTCGCGGTGCTCAAGGCCGGCGGCGCCTTCGTGCCGCTGGACCCCAAGGCTCCGGCCGCGCGCAAGTCGTTCGTGCTCAAAGACAGTGGCGCGAGCGTGCTGGTGACGACGCAGGCTCTGCAAGAAGTGTGGCACCCGGAGGTGCCCCACCTGGTACGGCTGGACGCAA # Right flank : TTTCGGAGAACCCGCCTCCGGTGGCGGGTCCCGAGAACCTCGCCTACGTCATCTACACGTCGGGCTCCACGGGCGCGCCGAAGGGCGTGATGGTTCAACACCGCTCGGTGATCCACCTGCACCTGGCGATGACGCGGAGCATCTACGAGGAGTTGCCGCCTGCTCAGCGCATCACCGTGAACGCGCCGCTGTACTTCGACGCCGCCATCGAACAGGTGATCAAGCTGCTGGACGGCCACTGCCTGGTCATCGTCCCGGAGGACGTGCGCCTGGATCCGGAGGCGATGCTGGATTGGCTGGAGCGTCAGCGCATCCACCTGCTGGACGGCACGCCGTCGCAGATCAAGCTCCTGCTGTCCGCGGGAATGCTGGAGCGCGCCCATGGCCCCGTCCGGTTCTCCATTGGCGGCGAGGCGATGGACGAGGTGACGTGGCGGCAGCTCGCCGCGGCGAAGCACGCACGCGCCTACAACGGCTACGGCCCCACGGAGGTCACCGTG # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AACCTGTCGGACAGTCGGACAGGTT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [33.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA // Array 1 17077-16912 **** Predicted by CRISPRDetect 2.4 *** >NZ_RAWC01000039.1 Corallococcus sp. CA049B NODE_39_54483_cov_17.7954_ID_9396, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ============================================== ================== 17076 25 100.0 44 ......................... CGGAGCGCCACGGCAGGGGGCCGCAGTTCCGCCCGAGCAGCACG 17007 25 100.0 46 ......................... GGAAGGACCGTGGCTGGGAGGGGCCCTGTTCCACCTGGACATCGGA 16936 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= ============================================== ================== 3 25 100.0 46 AACCTGTCCGACAGTCGGACAGGTT # Left flank : GCGGACACAGCGCTTCCAGGCGGCGGTGGCGGGCGCGGGCATCGCGAACTGGCAGAGCTACTACGGCACGAACCACATCGACTCATGGATGCTGCCGTACTTCGGAGCGTCGGTGTACGACGAGCCGGAGGTGTACACGCGCTCCTCGCCCATCAACGGCGTGAAGCAGGTGAAGGCGCCCACGCTGGTGCTGCACGGTGAAAGGGACCTGGAGGTGCCCGCGTCGCAGGGCTACGAGTTCCACAAGGCGCTGAAGACGCTGGGCGTGAAGACCCAGCTGGTCATCTACGCGGACGAGGGCCACAGCCTGCGCAAGCCCGAGCACCAGAAGGACCGGCTGCTCCGGACACTGGACTGGTTCGACGCGAACCTGCCGGCGGGGACCGAGTCGAAGCCGAAGGTGCGGGCACCGGCGCGGTGAGTCTTCGGACACGAAGGCCGTCCCACTGGATGAGAAGGTAAGGACCCAGAGGAGCCACCCTGTCAGCGCGAATCACGAA # Right flank : TTGACTCAGCATCAGGCGGGAGGTGGGTAGGGGGGGAGTTCGGGGAACAGGTCAGGGACTGTGGAGGCCGGATTCGGCGGGGGCCACGAGTGAGGTGCGCACGTGGTTGCGCCACTGACCGTTGATCAATTTTGTCGATATTGACGGTTAAGCCTCGAATGGGCGGCTCTTTTGAGCCCCATATCTCCAATATCGACAAAATTGGTGGAGGGTCAGGGGCCGCCGCGGAGGCCGGGCTCGGCGGGGGCCACGAGCGAATTGAGCACCTGGTCGCGCCACTGGCCGTTGATGAGGAGGAAGTCGCGGGCGTAGCCCTCGGGGATGAAGCCCAGGCGGCGGAGGACGGCGGCGCTGCGCAGGTTCTCTGGCAGGTGGCTGGCCTGGAGCCGGTGCAGGCCCATGGCGCTGAAGGCGAAGTCGCAGAAGGCGCGGAGGGCCTCGGTCATCAGGCCCTTGCCCTCGTGGCGATGATCCAGGCCATAGCCCAGGTCCGCGGCCTG # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AACCTGTCCGACAGTCGGACAGGTT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.60,-7.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [36.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 51462-47292 **** Predicted by CRISPRDetect 2.4 *** >NZ_RAWC01000045.1 Corallococcus sp. CA049B NODE_45_52306_cov_17.7014_ID_9408, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 51461 37 100.0 35 ..................................... ACGAATCCGCCGCGCTGCGTTCCCTGCCTGCCCCC 51389 37 100.0 33 ..................................... AGCTTGCCGATCATCGGGACAAGCTTGATGTCG 51319 37 100.0 35 ..................................... ACCTCGTTGAGGCCCGGCTTCAGCGGGCTGCCGTC 51247 37 100.0 34 ..................................... TCCAGCCGAGGCGGGGGCCGCGTCAGCCCGGCCA 51176 37 100.0 33 ..................................... TTTGAGGCCATGGACGCCAGCGGGGACCGCGAG 51106 37 97.3 35 ........T............................ CACGAGGCGGTCACCGTCTGCTTCTCAGCGTCGAC 51034 37 100.0 37 ..................................... TAGTACCCAGCGCAGCACCCAGAACCCACTTCGGCCG 50960 37 100.0 36 ..................................... ACCGGGGGGCGAGGGTAGGCCATGTCCGGAGAGGAC 50887 37 100.0 36 ..................................... ATGGCGTCCGTCGTCTGGGGCTGGCTGGAGCAGGGC 50814 37 100.0 35 ..................................... ATCGAACTCCACTCGAAGTAGCCCGCCCTGCCCCC 50742 37 100.0 34 ..................................... ACGGAGGCGCAGAAGGCCGTGCGCCGCCTGATCC 50671 37 100.0 34 ..................................... TCCGACTCCCAGCCCTCCGCCTTCCAGCGCGCCT 50600 37 100.0 31 ..................................... AGGAGATGCTGGCCGAGGCGAGCGCTTTCCC 50532 37 100.0 37 ..................................... CCATGTGGGTTGACCTGCTGGACTTGCGGAGGACGGA 50458 37 100.0 37 ..................................... TTCGAGCGGGTGACGGAGCGGCACGGCGCCCTCGTCG 50384 37 100.0 35 ..................................... TTCTCGGACGGCTCGCTGGCGGCGCCCACGCTCGT 50312 37 100.0 33 ..................................... GTCGCGTCTGGCCGGACACGGCCCGAGCGAAGC 50242 37 100.0 33 ..................................... TCCAGGGCCCGGGCCAGCACCCCGCCGACGCGG 50172 37 100.0 33 ..................................... CATCTCGTTCACGACGGCGCCGGGGATGCCCGC 50102 37 100.0 34 ..................................... GCGCCAGGGCCTCATAGGGGCACCTGGTGCAGCG 50031 37 100.0 33 ..................................... GTCCAGCTCACGCAGCGCATCGGGGCCCATGCT 49961 37 100.0 34 ..................................... AAGCAACGGCGCTGCACGGGGTGCGGTGGCCGGT 49890 37 100.0 34 ..................................... TCCGGCGGGATGGTGTCCGGAAACGCGTTGGATT 49819 37 100.0 33 ..................................... GAGTACGGTCCGGCCCGTGCGGCTCGCGTCTAC 49749 37 100.0 34 ..................................... TCCTGGTAGTGGTAAATGCTGCCCCAGTGCGACA 49678 37 100.0 34 ..................................... CTTGGACACGAAGTCGCGGCGCGCTGGGTCTGTG 49607 37 100.0 35 ..................................... ACCGAACCGGTGTTCGTCGCGGACCAGGACGTCCT 49535 37 100.0 33 ..................................... CTCGGGGCGCCTCCAGTGCAGTTCACCACGGCT 49465 37 100.0 34 ..................................... ATCACCACCGCGGATTTGATGGTGAACCCGGAGG 49394 37 100.0 34 ..................................... TACACGGCCAAGGCGTCCCGCGCCGAGCGCGACG 49323 37 100.0 33 ..................................... TTCTGAATGGCCATGCCGCGCCGGGCGCAGAGC 49253 37 100.0 36 ..................................... AGCGTCCAGAGGCGGCTCCCCGTCTTGTCCGACGAG 49180 37 100.0 34 ..................................... AAGCAACGGCGCTGCACGGGGTGCGGTGGCCGGT 49109 37 100.0 33 ..................................... ACGCTGGGCCTGAATGCGGCGCTCACCGGTAGC 49039 37 100.0 36 ..................................... ACCGAGGAAGTCGTGGCCTACCGCACGCCGCTGCCG 48966 37 100.0 34 ..................................... ACGAGCTTGGCCAGATGGAACACCACGAAGTCAT 48895 37 100.0 34 ..................................... ACGTCGATCATGTCCTGCTCCTTGGGTGGGTGCT 48824 37 100.0 36 ..................................... CGCATCCCCAGCATCTGAAACCTCGCCATGTCCACC 48751 37 100.0 34 ..................................... ACGTTGGTCTTGAACTGGAGGTACGTGAGCGTGT 48680 37 100.0 33 ..................................... CCTCCCACCATGGCCATGACGCCGATGCGTCGG 48610 37 100.0 33 ..................................... CTCCGGCTTGATGGAGAGCTTCAGGCTGTCCAC 48540 37 100.0 35 ..................................... CCGCCCTGGGCCTGCGGCGCGGTGGCGCCGGTGGG 48468 37 100.0 33 ..................................... GCGTTCCGCAAGTTCGCCGTGCGGACCGTCGTC 48398 37 100.0 35 ..................................... CAGTCCGCGCGCTGAATCCACCGGGCCAGGAAGTC 48326 37 100.0 32 ..................................... CATCGCCGCCCGGACGTCGCGCGCGGGGACCA 48257 37 100.0 34 ..................................... TGGCGCTTGTTCCGGTCCTCGATGCCCTGCTGGA 48186 37 100.0 35 ..................................... ACCCACCCGCCCTTGCGCGGCGGCTTCGCGAGGCT 48114 37 100.0 35 ..................................... CATGAGGAACGCGAAGGCCCACGACTCGATGGGGT 48042 37 100.0 36 ..................................... ACGGGCACGCGGGCTGGGGCCATCCAGTCGGTGGAA 47969 37 100.0 33 ..................................... ACCCACCAGCCGGGCGATACCGACCCGGAAGTC 47899 37 100.0 35 ..................................... ACCTCTGACTCCGTGGGCGGGGGCGAATACCCGCG 47827 37 100.0 34 ..................................... ACGAGGATGGACAGGCCGACGCGAGCGGGAGTCA 47756 37 100.0 35 ..................................... GCCTTCAACGAGGCGTCCGCCGAGGGCGCGGCCCT 47684 37 100.0 33 ..................................... TCCGCCACCTGGACGCGGCCCGCGAGCGTCTTC 47614 37 100.0 34 ..................................... CGCGAGGACGCGGAGCGGCTTGGCGAGCGCATCG 47543 37 100.0 35 ..................................... TACGCCTGTTGCTGTCGCAGCCTCTTTGAGGCCCA 47471 37 94.6 36 ..............A..C................... AAGGACCCGCGCGCCTTCGGCACGTACCTGCGCGAC 47398 37 97.3 33 .................A................... GTCGCCGGGCTGGCCAAGGTGCTCGCGGGCTGG 47328 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 59 37 99.8 34 GTCGCTCCGCTCTTCGGGGCGGAGCGTGGGTTGAAAC # Left flank : TATCCGCCCTTCCGGGTGAGGTGACGGATGCTCGTGCTGGTCTGCTACGACGTGGCGAACGATGACGCGGCGGGGGCACGGCGGCTGCGGCGGATCGCGGAGGCATGCAAGGACCACGGGGTGCGGGTGCAGTACTCGCTCTTCGAGTGCCGCGTGGGGAAGCGTGAATGGGTGGCCCTGCGTCAGCGGTTGTTGGAGGAGGCGGAGCTGACGAAGGACAGCCTGCGCTTCTATTTCCTGCACGCGGACGAGGAGGCCCGGTGCGAGCACCACGGAGTGAGACCGCCGCTCGACCCGACGGGGCCGCTCATCGTGTGAGGGGCGGCGCGAACCTGTCCCGATGGAGGGCCCGCCGGAGGTTCGCGCTCGGGAAATCCCGAGCGGGGACAGGAGGTTGCACGGACGGTGCCGTTCTTTCTGTCAAGTGGAGACCTCCGGACCTGGAGGTTCGCGGAAAAGGGCGGATTTCTTTGGAAAATTCATAGGTTGTGACCAGTAGG # Right flank : ACCAGTGACGAGCGAGGCTCTCACGGGCCTGCGGGCGTCGCTCTGAGCTTGGCCCAGCGCTCTCAAACAGTCGTCGCAACAGTTGACGCGAATACTTCGGCAGGCGTTCGCCATGCAAGCGTTTGACGCGGGCCCGTCCCCCTCCGCGCGCGATTCGAGTCGGACAGTCGGATTTCCTGCCCGGCAGTACGGCTCCTCCGTCCCCCAATGGGCGCGGAGCGGGCCGCTTGTCTGTGAATGGACACGGTGTCGCACGGCCCCCTGCCACGGCGCGATGACGAGCGCGCACGCTTCTCCTCCGCCCTGCGACTAACGCCGAGGGCAAGGGGGAGCCGATGTCGAACCCGCGCGCGTTGCTGGTGTGCCTGCTGGCCAGTCTCTGGGGCGGGTGTGGGGCGGCCGTCATCCCCGCCACCGAGTGCAACCAGTCGGATAGCACGGTGTCCTGTTGCCTCAAGCGACACCCGGGAGCCTACGAGGGCTGTGGTGCCGACGCGCCC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCGCTCTTCGGGGCGGAGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //