Array 1 702581-702088 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP049703.1 Parageobacillus toebii NBRC 107807 strain DSM 14590 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 702580 30 100.0 35 .............................. CAGTCGGACAGGTTGTGTATTGGAACGGTACAGCC 702515 30 100.0 37 .............................. TTTCTACTCAAATAATTGAAGATGAAATCGGGAATCA 702448 30 100.0 35 .............................. CTTGTTCTAAAGTGATTCCCTCATTTTCCAACTCT 702383 30 100.0 35 .............................. CCTCTAAAGATGTATCAGCGTACCGATCGAGGCAT 702318 30 100.0 36 .............................. TCAATTCATTGCTAAAAATCGGATTCCCTCCCGAAC 702252 30 100.0 36 .............................. TGAGAATTGGTGCGGAATGACATATGCGCTGCTACC 702186 30 100.0 38 .............................. TCTTTCAGAATACAATGCAACACCGATTGTTCAGCATT 702118 30 90.0 0 ....A............A...A........ | A [702102] ========== ====== ====== ====== ============================== ====================================== ================== 8 30 98.8 36 GTTTTTATCTTACCTATGAGGGATTGAAAC # Left flank : AACATATGGAACGAATTTTTATTTGCGGTAACGATCACAACGTCTTCCCAGCAGCCCATTATGGTCGCTTTGCAAAACTTATCCGGAAGCCAAATCGTGCAATGGAACGTGCAAATGGCAGGGGCGCTGCTTGCTGCTTTGCCAACATTGCTTGTCTATATGTTCCTCGGCAAATATTTCGTCCGTGGTTTGCTAGCTGGTTCAGTAAAAGGGTAATCATGCATGCCGGCAAAGGCGAAATGTTTGTGGAGGATCTTTTAGGAGCTGGCAGGGAGAAGAACTATTTCGATAATGCCAAAACATCTGCAGTAAGAACTTCCTGTGCCACAATCTTTGTCGTCGACCTCCAATCGTGCAAAAACTCTAGGAGATCGACGACAATTTCTTTTTGCCTCTATCCTTACAGCCATCACCGATCCACTCTATTGACGGAATTTTCAAAATGGATTATACTGGACTTGCTTTGTTTTGAAAAGTGTTGATGTAGCAACGTTTTTGGG # Right flank : TGAGCAGCAAGGTGCGCATTTTGGGCCAAAGGAAAAACAGGTCGTATCTTATCTATGAAGAATCAAAACTTTATCAATCCACTCTTTTCGGGTACTTATTGAAAAACCGCTCAACACAAAAACCCGCTGATTTTCAGCGGGTTTTATCACTGGCTTGATGCCTTATGGTACAATAAAATCGGAAATCATAGAGACGAAAGCGGGGAGAAATGCGTGTATCTTGGGGCGATTGAAGCAGGTGGAACGAAATTTGTATGCGCTGTCGGGGATCGTGACGGAAATATAAAAGAAAGAGTGACATTTCCAACGGCGACGCCGGAAGAAACGATGCGCCATGTCGTCGATTTTTTTAGCCGATATGAATTAGAGGCGATCGGCATCGGTTCTTTTGGTCCGATTGATTTGCATCCCGATAGTGCGACATATGGCTATATTACAAGCACGCCGAAACAAAAATGGGCGAATTTTAATTTTGTCGGTGAAATGAAACGGCATTTTCA # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 1224428-1224594 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP049703.1 Parageobacillus toebii NBRC 107807 strain DSM 14590 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1224428 30 100.0 38 .............................. ATGAAGAAGGGTGAAAATTATTCGTCAGTGAACTTGAG 1224496 30 96.7 39 .................A............ CTTTTGTGTGAACCAAACGGTCAATCTCACGCAGATTCA 1224565 30 86.7 0 .C..................A...GA.... | ========== ====== ====== ====== ============================== ======================================= ================== 3 30 94.5 39 GTTTTTATCTTACCTATGAGGAATTGAAAC # Left flank : ACGAATTTAAAAATGAAGATAGACATCGACATTCATGATACAAAAAATGCATTACCATCAGAAGAATGAAAAACAATTTTGTCGAAGTATCTCTTTGCGGCTGGGAGAATGAGGTCGTTTCTTATCTATATAAATCCAGTTTGAAATTCCGACATGTTTAACCAACACTTGTGTCTATGCTGCTCCTAAACGAGTAAATAAGGAAGCAGATCAATGAATGAATAGTAAGTAGATAAAATATATTTCGTGTTTCCAGATTCATCATCAAAATAGGAAGAAATGTAACGATAGTGCGATCGTATATAAACTATCATTCATGGCGAAAAAATTGTCGTCGACCTCCAATCATGCAAAAAGTGCGGGGGATCGATGACACTTCTTTTTTTTCTTTTCTTCCCTACAGCCATCAGTACTTTTTTGATATTGACGCAATTTTCAAACTGACGTATACTGTATGTATCCATTATTCGCCATCCTTGATATATTAGCATTTGTTGTGG # Right flank : CCAAGCTAAAAAAGGTTCTATTATTGTTTTTATCGTAATTATGAAATTGAACCAGCGTTCCAACGTGATATAATGAATTGGTAACTATTTATTTTTATCGCGCCTACGAGTAATTGCGTAGTGTTCCGGCAGCTTTCCCTGCACCATGTCAATATCACGTTCTAACCGATAGGCGCATTCTCGTTTCTCTCTAGCATAATGCTAGTGGAGAAACGAGTTTTTTTTATTGCACTTTTATTGTGTGCATGTTCTAATAGTGATTGATGGGAATTAGGAAGGGATTCATTTCATTGGCAGAGGATATATTCGAAGCAAGGAGTGGGGGCTGATGGAGAAAGAGGCGATCATCCGCTTTGAGCGGGTGACGAAGGAATACGATGGGTTAGTCGTGCTCGATGATGTCAGTTTTGAGATTGAGCGCGGGAAGTTTTATACCTTACTCGGGCCGTCGGGATGCGGGAAGACGACGATTCTGCGTTTGATCGCGGGGTTTACGGAGC # Questionable array : NO Score: 6.89 # Score Detail : 1:0, 2:3, 3:3, 4:0.72, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //