Array 1 230544-231123 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLOP010000004.1 Paenibacillus barcinonensis strain N32 No32_ctg004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 230544 33 100.0 36 ................................. CCAAACTGATTCGCAATAGTGTTCTGTATCTGGATG 230613 33 100.0 33 ................................. CACCGATCCAAGCCATTTCGCGGGAAGGGGAGT 230679 33 100.0 35 ................................. CCTGCCAAAAAAAATATATTCCTGTGGTGTATGAT 230747 33 100.0 37 ................................. TGCTTGGCTAACCACGCACCGTTGAACAATTGCTGTA 230817 33 100.0 35 ................................. CCAGTCGTGGGGCGGCCTTTTATATACCCACATTC 230885 33 100.0 36 ................................. GGCTGCCGATCCTTTGGGCAGTGATTGTGTCTGGTA 230954 33 100.0 35 ................................. TCGAATAATCTCCCGAATACGTTGTTCATCCATGT 231022 33 100.0 36 ................................. TCATCACTGATAACATGTTGGCACAAAAGTATCTGA 231091 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 9 33 100.0 36 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Left flank : GGTCACTTGGTCGTTATTTAATGTAGCACTTGAGGGAGATGTTGGATGTGATGTTTGTCATAGTGAAAGGGAAGGAGGGGAACCATCACGCTAACGATCCCACAGAACCTTATTTTGCAACCTGAGCGATGTTTTAACATCTAACGATCCCCAGAAGCGCTATTGTAGTCCAAACCTCCAAAATGTGGCACAAAATGCGTCATTTCAAGTAAATAAGGTTTCTGGGGATCGTTAGAATCTGAGAATGCACAAAATGGGCCAAATAGCGTCGCTGTGAATCGTTAGGTTCCTGAAGTCAAGATTTCTTGTGGTGCGAACCCCAAGCTCACATGATTTTCCTAGGGGAATCGCACCAAAAATCACTCGTTTTATTCCCTTTTGGCAACAAATTCGTTGAATTATTTGATTGCTTTGTATAAAATTAGGGGGAATCAAGGTAAGGAGTTGCGGAATTACGAGACATTTTCGTTGGAGAAAATGTTTATACGTTATTTTTCGCT # Right flank : TGATGCAATGGGGTGCTTGGGTTGTTACCCTGGTCGCACTCCATATGAACTTATCGGAATATTTGTTGCGGTTGCTTACTTGAAAGGAAAGTAAGGTAAGTAGTTGGGAAAAATAAAAAAAGATGCTCGTCTGAGCATCTATACACTGGTATAATTTATAATGTACAGCCAATTTGTGGTGGGGAATGGTCATCTCCTGAAAGGAGGTGATCGCATGAACTTTACTTTCGAACAAGTGATGCTTATAGCAATGTTTGTAATCGCGTTGCTGACATACATTGATCGTAAGAAGAAGTGACCCGCCACAGGTTGACCGCCGAAGGTTGGGTCACTTCACTTTAAATGAGCACCACTCAGAGGTGATCACACCACATAAGCTGTGCAGGGGTAGCCATTGGCGTGGCTACTCTTATTTTTTCTTACTTTCATTTTATTAAACATCTTTACCGCATACAACCCCTACATACATATATTTATTCTGATGAAGTGAAAAGGCTCCT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : NA // Array 2 232750-233726 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLOP010000004.1 Paenibacillus barcinonensis strain N32 No32_ctg004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 232750 32 100.0 34 ................................ ACTGGAACGTCTGTACACTTCTTTATCAACCTTG 232816 32 100.0 36 ................................ TGATTTCTTGTCGAATAAATCCCTGATCGGCTCTAA 232884 32 100.0 35 ................................ ATCAAGCTGGGTATCCCAACAGCTTAATTAATTAT 232951 32 100.0 36 ................................ GCAAAGTACCATCGACCACTAGCATCCTTAAAAAAC 233019 32 100.0 36 ................................ GACTTCTTGCGGACAAGAGACTGGAGTTCGTAGCAC 233087 32 100.0 36 ................................ GACTTCTTGCGGACAAGAGACTGGAGTTCGTAGCAC 233155 32 100.0 35 ................................ GCCGCAAATGTGATCTCGCGTACAAAGTCCGCATA 233222 32 100.0 35 ................................ CATTTGTGATCAGAGGTAATGTAATGCCCGCTGGC 233289 32 100.0 35 ................................ TTTCAAAAAAAAGGCTGCATGTTCGGGATGATCTC 233356 32 100.0 35 ................................ TGACAAAGTGAGCTTTGACAATACGGGAATTGCGC 233423 32 100.0 34 ................................ TGAAATCGTCTCACGTTCCCACTCAGCCATTGCA 233489 32 100.0 36 ................................ GGGAGCTGCCGCCATTACGCTCACGAGGAGTTGCGG 233557 32 100.0 36 ................................ GTGATCTGTAGATCGTCATGAATGGCCTTCGTATTA 233625 32 100.0 38 ................................ CCCCACTGAATATTAAAAGCTGTATCCTAAAAAAAACT 233695 32 87.5 0 ...........C...........A.A....C. | ========== ====== ====== ====== ================================ ====================================== ================== 15 32 99.2 36 GTCGCACTCTATACGAGTGCGTGGATTGAAAT # Left flank : ATGAATGTTATTTCATTTTTCTTGAAGAGAGTTCTGGAGTGCTATGGCTTCGTCATGTGTGTAAGGTGGAACATATAGATAATTTATACATAAACGGAGATGGAGGAGGGATTATGCTGATTGAACAAACACGAGGAGATATTACAGAGATAGTCCAAAGGATCGTTGATCGCTTATCTGGAATGGATGCTCTTACATTTCTAACAGATGTATTGTTGTGGACTCCAGAACGGGTAGATATGAGCTTGAAACTGGATCGTTTTCAATAGTAATCTAGGATGTTTTTCTAAATGAGTTCAAATACGATGAGTGCGAATGCCATGCTCACATGATTTTCCTGGGGGATTCGCACCAAAAATCGCTCTTTTCATTCCCTTTTGGCAACATACTTGTTGAATTAATTGATTGTTTTGTATAAAATCAGTGTGAAATCTTGTTTAGAAAGTGCGGAATTACGGAACATTTTCGTTTGTTGAAATGTTTATACGTTATTTTTCGCT # Right flank : TACAATCCCAAAAAGACATATCTCATTAAACGAGATATGTCTTTTTGCATCCAAGAGATGTGTAAGACTACTAAAAATCGACTGAACCTTACATCGAATTACATAAAATTCTATAAAAATACGTTTTTTAGAAGGGAAATATATTTCGATGTCGAAAATTACAATACAAGTCTTTTTGCCTATACAATTGGTAGTAAAGTCTTGATAGAACATGGTGGTGAGCTGGCATGACTTACATTGCGCATATCCGTCAAAAAGACAACGAGATTCAAACGGTGCAGGCGCACTTAATCGAGGTGCAACAGGAGGCAGAACAGGCTGGAGAGAAGATTGGCATCAAAAATTTGGCTGGCATTACAGGTTTGTTGCATGATATGGGCAAGTACACCGAACAATTTCGCGATTACATTCAAGAAGCCGTGGCGAATCCCGACAAACCTCCACGAAGAGGGTCGGTAGATCATTCTACCGCCGGAGGCAAGCTGATCCATGAGCGCTAC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATACGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.70,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 242752-243660 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLOP010000004.1 Paenibacillus barcinonensis strain N32 No32_ctg004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 242752 33 100.0 35 ................................. ATCCATAGACTCACACTACTTTTTCAACTTTTTAA 242820 33 100.0 33 ................................. GATCCTAGGATAGATTTTCGGGTACTCAATCAG 242886 33 100.0 35 ................................. TGTCATGATTACATACCTCCAGTTTTCAAAATCAA 242954 33 100.0 35 ................................. TTTGAATCATATTTGACATCTGCATCTAGCAGGCC 243022 33 100.0 34 ................................. GTTGGTGTAAGCTGCCGAATGATCTCCTTCAGGC 243089 33 100.0 35 ................................. TGGCTCATCTAATTTCACACCAGTACGATACTGGT 243157 33 100.0 34 ................................. TTCCACGTCCGCTGTAGCTCACTTGTCGATTGAT 243224 33 100.0 35 ................................. TGAATTATCTTGGTAATCGTCAATACCCAGCGCTG 243292 33 100.0 33 ................................. AAGTGAGAAGAAGATATTAGGGGAGGCTTTTTA 243358 33 100.0 34 ................................. ATCGAAGAGATTCTCACGGAGCTGCGTAGACAAT 243425 33 100.0 34 ................................. TTCAAAAAAGAAGAATAGGAATCGCATGATTAGA 243492 33 100.0 35 ................................. CGTAATGTGATCGGTGAGCGGATCGAGTCCGGTTG 243560 33 100.0 36 ................................. TATGTGGCGGAAGGGAAACTGTCATGCATGCTAACA 243629 32 75.8 0 ..........A..C.....A...T.-..C..CC | ========== ====== ====== ====== ================================= ==================================== ================== 14 33 98.3 35 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Left flank : ATTCTTGTGGAAGTAGGTGTGAATTTTGCTTGTTCTCATTACTTATGATGTGAGCACGATGGATCGTGAAGGTCGAAGAAGATTGTCCCGAGTTGCAAAAAAATGTGTGGATCACGGTCAACGTGTGCAGAACTCTGTTTTTGAGTGCATTTTAGACGCTGCACAATTCAGACGTTTACGATATGAACTAGAGGAACTGATTGATAAGGATACAGATAGCTTGCGATTTTATAATCTCGGCGACAATTACAAAAGCAAAATGGATCACGTGGGGGCTAAGGATACCTATGATATGGGTGATCCGCTGATCTTGTAGCTGGTGCGAATGCCAAGCTCACATGATTTTCCCGGGGGATTCGCACCTCGAAAAGCACTTTTTTGTGACCTTTTGGCAACAGATTTGAGTTATAATCGATATTTAGAAGGTTAGTAAAAAGAAATAAAAGCGAAGATACGTTTGTTATTTATCATTTGATATGGTATCTACGTTATTTTTCGCT # Right flank : CCGGTATATTTTTTCTGATCCATGCCAGGAAGTTAGCGACATATTATCGAATATACTGGACATCACCATAGGAACGAAGATCAGTGAACTTCACTCTGGCAAAATCCCTGTCAAGAGACTCGGAAAGGTGCTGATTAACGATATATGAATAACGATTTAAAGCAACTCCTTGGTACAATTTCTCTGGAAAGGTATGTAGCAGAGGGGACGTTCCAACAATGTTTACCCGCCGGCGGACGCATCACACTGGAGCAGGCTAAAGCGCAGGCGGATGAAATATGGAGCGTAGAAAAGGAAAAGTTAGAAGTCATAAGTTTTGATTACGAGGGGTACACAGTGAATCTGACCTTCCAGATGGAAGGACTGTATTTGTTCGATAGTGTGGATATTTGGGCTGAAGAGGGAAATGGAACGAAGAAAGGTTCATCTCAGCTAGGTACATTGGAGACAATAGAGGGATGGCAACATTTTGCGGATAACAAGGGGATGCAGGTGGAGTG # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : NA //