Array 1 58175-56764 **** Predicted by CRISPRDetect 2.4 *** >NZ_JICM01000023.1 Acinetobacter sp. ETR1 contig_23, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 58174 28 100.0 32 ............................ ACAAAAAAAAGGATTCTCTAAAATCGAATAAA 58114 28 100.0 32 ............................ GTCCTAAAATAACTCGTATTGATTACGCATTC 58054 28 100.0 32 ............................ AACAATTGCCAGACTGGTACGAAGAACCGGTA 57994 28 100.0 32 ............................ GAGCTGCTGCTAAGTAACTCAATAAGAAGAGG 57934 28 96.4 32 .................T.......... TTTATCCACATTGCCACTGTGGGGATCACTAT 57874 28 100.0 32 ............................ TTATCAGGCATGAGAATGTCCAGGACTTTTGA 57814 28 100.0 32 ............................ AATAATGATTGAGATCGCTTGATCTATACCCG 57754 28 100.0 32 ............................ AATACGTTCACCAGACATTTGCTCAACAAGAA 57694 28 100.0 32 ............................ TTTCAGTATTACAACCATATTCAGCAAAAAAT 57634 28 100.0 32 ............................ TCAAACAGATAATGAAGCAACCCTCTTAGTGT 57574 28 100.0 32 ............................ AGTCAATCGGTGATGGAAGAACACCCTCAATA 57514 28 100.0 32 ............................ ATGAAAATGGAATGGTCTGTAGTCCAAGATTC 57454 28 96.4 32 ........A................... CTTAAAAAGTCAAACCTCGATGCTCTATCAGC 57394 28 100.0 32 ............................ GATGTGTATTGTAGTCATATTGCACCTGTCTA 57334 28 100.0 32 ............................ GCAGCAGCCAGTTGTGCTTCGGGCAGTTGATC 57274 28 96.4 32 .............C.............. ACATTAGCTACACCACCTAATAATATATTAGT 57214 28 92.9 32 ...........CA............... AAAATAAGGAAGGATTAAACCACCACATTTAC 57154 28 96.4 32 ..........A................. GCTGATGTAGAGCGTAAAACACTACCCGGACA 57094 28 96.4 32 ..........A................. TAAATTCACACCATTGAATGGTACAGTGGGGC 57034 28 82.1 33 ...T.....TACA............... GAATGCACAAACGATTCTTGAAGCAATTGATGA 56973 28 89.3 33 .........T.....A....T....... ATGTGTTCAGCGGTAAAAGTGGTCTTGGTTTCT 56912 28 92.9 32 ...A......A................. TATCGAGTCAATCCCGATTCAGGGTTGGAAGA 56852 28 92.9 32 ............A............G.. TGTGCAAGAATTCTATAAAACGAAATATATTG 56792 28 71.4 0 ........TA.C.....T..GG...G.T | T [56772] ========== ====== ====== ====== ============================ ================================= ================== 24 28 96.0 32 GTTCACTGCCGAGTAGGCAGCTTAGAAA # Left flank : TCTTGAAGCAGATAAA # Right flank : GTTTGGTCAGTTGAAAAGATGATTTTGATATTAAAGAAATACATTATAGGTTGAACTTTATTTTTGCTTATTTTATATTTAGATAAATTGAACAATATTTGTTCTATTTATCTAAGGAGAGGTTAAAAAATGTCTAATAAATCGATGCATGTTGTGTCAAATCCAAAAGGTGGTTGGGATATTAAACAAAGTGGAGGAGAAAGATCATCTGGTCATTTTGATACAAAACAAGATGCGATTGATCGTGCTAGGACTATTAGTGAGAATCAACAAACTGAGTTAGTTATTCATAATAAAGATGTAAAAATTTCACAGAAGGATAGTCATGGAAAAGATCCATTTCCCCCTAAAGGATAATAGTACTTTCTACTAAATTAGTAGCTTAGAAATATAAAGTATTCCTTTATAGGTTTGTTTACTGCCATATAGGCAGCCTAGAAAATAAAGATTGGCAGCAACAAAAAATCTTGTTTAGTTGATTGTGGAAAGGTTTGGGATTG # Questionable array : NO Score: 5.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGAGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGAGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [23-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 32134-32762 **** Predicted by CRISPRDetect 2.4 *** >NZ_JICM01000009.1 Acinetobacter sp. ETR1 contig_9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 32134 28 100.0 32 ............................ ATTTCAAAGAGAAAACTTAAATGATATTAAAA 32194 28 100.0 32 ............................ TAACCAAACCCATTTCTTTTGCCAATATACAG 32254 28 100.0 32 ............................ ATCAAAAATTCCTGAGCGCTGATTTGAATAAG 32314 28 100.0 33 ............................ GCGTATGGCATTGCGCAATGGCATCCGGACAGG 32375 28 100.0 32 ............................ AATAAAAGTTGGTAGTGGGATGACATAGTAAA 32435 28 100.0 32 ............................ ATCGATCGGAGAACAATTTTCAGTTTCAGCAC 32495 28 100.0 32 ............................ ATTATAGAAAACCACACGGCGATCTAATTCAA 32555 28 100.0 32 ............................ TATGGGGTTGCATATTTACAAGGTGGTGTTAA 32615 28 100.0 32 ............................ GTGAAAAGAATGATGATTACACAAAGAATGTC 32675 28 96.4 32 ...........................G CATGTGATATTTGTATAAACATGGGGCGAACC 32735 28 92.9 0 ...........A.C.............. | ========== ====== ====== ====== ============================ ================================= ================== 11 28 99.0 32 GTTCACTGCCATATAGGCAGCTTAGAAA # Left flank : GATGCAAAAACCGCATACGATTGTAAATCTAGCAAGCAATTATCAAGTCAATGATAAGCTCACTGTACGTGGTGGCTTTACTAATTTACTTGATAAAAAATTGTCAAATGGTGCAGATACATACTTCGTTGAGCGTCAAAAAGTATTTGTAGGTGCAACCTTTAAATTTTAATCAATTATATTGAAATGAAGATTGACTTCACTTCAATTAATAAATCATGCGTTAGAAAAACCATCTTTGGATGGTTTTTTTGTTATGTATTTTTATTAGGAAGTGATTTTATTTCGATGAATCAAGTGCTGTATATAAAATAGTAAAGCAATGATCTTCAGAATTTAGGAATTTTTTGTTCGCACCAAAAATTTCCCCCAATATTTTTTTGATAATTCTATAGTTTAATAAAATCAGTAGGTTATATATGTTCTAAATAACTTTGGGTATTTTATGGTTTTTATATTTAACTTGCTGTTATCAGAATGTTTTTTGATTTAAAATTATA # Right flank : ATAATTTATATCAAGTCCTGAACTTCAGCATAAAATTATTGATTTTGTACTAAAGCGAGCCCTTGATAATTATGGTGGGGGCGGGTGCAACGCGTTGGGTATTCAAATAATCTCAATTCATCTAATAAGTGATCTGCGCCTAATTAACCAAGTCAGAATAAGTACACTGCAAGTGTTTTAAACAGGATGATGACGGAGGGACGTAATAAAATTCTGTTACGACTCCACAGGTGAATTTAACAGTGCAAAATACTAACTACGCCAATACTGTAACAACAACTAAAGTCACGACAGCTCAAGGCATTAAAATAAAACATAATGCCCTGGGTGTTATGAATTAGGTTTTAATGTTCCATATTATCTGATGGATTTGCATTATTTAATTCATTATTTACTTCATTAGAAAGAGAGTTATTTTTATTATCAGTACTTTGAGTTGGGGTAATTCTTGTTTCGTTATCTCTTTCATCTGAGTTAATAGTAACGATCTTTTGTGATGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1426-18 **** Predicted by CRISPRDetect 2.4 *** >NZ_JICM01000091.1 Acinetobacter sp. ETR1 contig_92, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1425 28 100.0 32 ............................ GTTATTGTATGAGTCAAACGCCCCTGTGATAC 1365 28 100.0 32 ............................ TACAGAGTTCTTTCATTAGTAAGCCATAAGAA 1305 28 100.0 32 ............................ AATAAGTTTAAGTTTTGGATTCAGCTTGTTAG 1245 28 100.0 32 ............................ ACCACGGATGAACCCACTTAAGGGATGGTTGT 1185 28 100.0 32 ............................ AGTTTTTTCGTTGACAGACTTAACCGGTGCAT 1125 28 100.0 32 ............................ ACGTACCGAAGATGACAGCGCAGCGAGCTTGA 1065 28 100.0 32 ............................ TACTAAGAACAAGCTACTTACATCAATCAATT 1005 28 100.0 32 ............................ GCTAATCCTAAAAATATTGTTAAAAAAGCTGT 945 28 100.0 32 ............................ ATCGTAAAAAGCCGCATCTTCTGAGCGCTGGG 885 28 100.0 32 ............................ TTGGGCAAATCTATAAGACTGACTGTAATTAC 825 28 100.0 32 ............................ AATACTTATTACCTAATGCATCATGAAAGACT 765 28 100.0 32 ............................ AGAATCCCTAATGCACTACCAATGCTTATTAA 705 28 100.0 32 ............................ TGACTGGTACGAAGAACCACAGAGTCAGTTCA 645 28 100.0 32 ............................ GCCCCAGTAAACAGTCGAGTCATAACATTTAT 585 28 100.0 32 ............................ CTCCTCGATAAAATTGCCTTCAGCATCGAAAA 525 28 100.0 32 ............................ ATACAAAGATACTGTGAAGATTCTGGAACATT 465 28 100.0 32 ............................ TTGAGTTAATTGAGGCGGGTAAGGTAAATCTT 405 28 100.0 32 ............................ AAAGCTCATTGACAACGATGATTCACCGGCTT 345 28 100.0 32 ............................ ATGACTTGATCTGAGTTAGTGCCAATTCAAGC 285 28 100.0 32 ............................ ATTTGGATAATCCAATCTGCTTGAATTTCACG 225 28 100.0 32 ............................ GACTTGAAGATTACTCATTGTTGCTCCCCCCA 165 28 100.0 32 ............................ TTGAATATCCATTGCAACATTACGATCACAGA 105 28 100.0 32 ............................ GTTGAATGAACCACTTGTATATCCCGATGGGC 45 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 24 28 100.0 32 GTTCACTGCCGAGTAGGCAGCTTAGAAA # Left flank : TTGAATATAAGAAAATGGTTAGATCGGTTTCCTGATTATGTGCATATCACAGGTGTGCGGCCTGTTCCTGAAAAAGTAACGGGTTACGCAGTTTATAAACGTAAACAAGTTAAAACCAACGCTGAGCGTTTGGCTCGCCATCGAGAGAAAAGAGGGGATATCGGCTTTGACGAAGCATTGAGCCGTTATCTTCAAGTAGTGACAACAACTGATTTACCTTATGTACAGATGCTAAGTTTAAGCACATCGGATGAACAAAATAAAAAGCATTTTAAGCTATTTATAGAAAAGCAAATCACTGAAAAATCTGAAACTCAGGTTTTTAGTACGTATGGGTTAAGTTCTGTGTCTACAGTACCCGAATTTTAACCCAATATTTTTTCACTCTTTAACAGTTTAATAAAATCAATAAGTTATGATTGTGGGTTAAAACTTTGGTCTTTTATAGGTTTTTAGTCTTAACTCACTGTTATAACTTTATTTTTTGTTTTTAAATTATA # Right flank : AGTATGTAGAGGGAATTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGAGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGAGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [16.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //