Array 1 95065-95752 **** Predicted by CRISPRDetect 2.4 *** >NZ_SEUF01000004.1 Acinetobacter piscicola strain C1T1-2_a 5866_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 95065 28 100.0 32 ............................ AATACAAAAATATTTAGATGATCCTAATATTG 95125 28 100.0 32 ............................ TCCTGCACCATTTAAAACATCAGAAATGCAAC 95185 28 100.0 32 ............................ CTTTTGCCAGTCAGGAGAATAGCAATCTAAGC 95245 28 100.0 32 ............................ ATTGCACTATTCAGATAAGGATATTTTAAATT 95305 28 100.0 32 ............................ AAAACCAAGCAATCCCGCTATAAGCATGTAAA 95365 28 100.0 32 ............................ AAGTAAAAAATTAGGCAGCAACCAACCGACTG 95425 28 100.0 33 ............................ GTCCAACTGAGTATAGATCATTAAATCCTTTTC 95486 28 100.0 32 ............................ AAACGGGTTAATCCAGCGATCTTTTACGTTGA 95546 28 100.0 32 ............................ TTATCAAATATTTCTTTATTCATAACATAAGT 95606 28 100.0 32 ............................ ATCCATCGTTAGGATTTGTTTTACTGCGGTAT 95666 28 100.0 32 ............................ TCCATGAGATTAGTCATGTAAGCATCGGGGGC 95726 27 85.7 0 ................AT......-..G | ========== ====== ====== ====== ============================ ================================= ================== 12 28 98.8 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : TCGGATTATTTTTTAGCGAAAGACAGAGTGACGAGCAAACCTACAAGATATGAAAGATTACAGATATTATGTACGAATGAAATCAAAAATTTTTGGGTTGCAGATGGTTTAAATCGTTTAGAGATTACTCATAAGATACAACCTTATTTAGATAATTTACGCTCAAATTTAGATTATCAAATTTAAAGAATAATTTTTTAAAATGTATATTGAGGCATGTTGAGCATCAAATGGGTGTTAGGAGTGCACTAACATCCTATACGCTTAGCAAAAGAGTGAAGTGATTCATCATGTAAAATAATACAGCTATGTATGATTTTTTATGATAATAGATTGTTAAATTAAGTTATTGGGTAAGAGAAGATTTTAACCAATATTTTTTTGAATATTTAATACGTTAATAAAATCAATAATTTATAAACATAGTTCAAAACTTGGGTATTTTGATATTTTAAGTTTTAACTCACTGTTATATCATCTTTTTTTGCTATATTATTACT # Right flank : GTTTGCTTTATGGGCTTAAGTATTTTCTTCACTTGCACGGTGAGAGATTGTTTTAGATAGTAGATCATAATTTAGATTTGATTTTGAATAAAAGTAAATATTTTAACTATAATAAGGCTACTCTCCCAAAATGATTGTTTTGTATGCGTATTTATCAGTCTGAAAACTAAATAATTTTATGATTTATAGACTGATTTGTAGATTGTTGAATTACAATCCAATGCATTTAAGTGCATATGTATACAACTATTATTTTTGTAATTAATTGTAAATACAAAGGTTTACAACTGAATGCAACCAATGCCAATCCAACACAAACTTGGTGCTTTTTATTTTTTCTACTATTCGATTGTTGGTACATTCATGCCTTATTGGAGTTTATACCTACAAGATCAAGGCTTTGATTTTAATGAAATAGGAATTTTGTCTTCCATCGCTATTATTACCCGATTTTTTGCACCTTTTATTTGGGGATGGATTGCAGATAAATCAGGTAAACG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 37977-37227 **** Predicted by CRISPRDetect 2.4 *** >NZ_SEUF01000005.1 Acinetobacter piscicola strain C1T1-2_a 5866_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 37976 28 100.0 32 ............................ TGACGGTTCTGTACTTTATGTTGACGAAGTTC 37916 28 100.0 32 ............................ AAAATCTTTCAACATTTGGTCAGGAGTTTTGT 37856 28 100.0 32 ............................ CTGCTACACCAACCGTCTTAAAAACCCTATGC 37796 28 100.0 32 ............................ TTTTTGCCAGTCTGGAGCATAACAGTCTAAGC 37736 28 100.0 32 ............................ AACGCAAGAGTTAAGCACCTAGCCAGTGTAAA 37676 28 100.0 33 ............................ AAGATAATTTCAGCACTGAAAACCATGTTTTCC 37615 28 100.0 32 ............................ GTGTCCCAATTTACCAGTGACTTTATGATTGA 37555 28 100.0 32 ............................ ATAATAACGACCTACTGTTTCATCAATTAAAT 37495 28 100.0 32 ............................ TAAATTTCTAGTTAAATCCATAAGAACATGAG 37435 28 100.0 32 ............................ ACAAGGGGCTTTTTTAATGCCTGCGGGCTTGG 37375 28 100.0 32 ............................ ACTATAGTTAATGAATCTTTAAACTATCCATC 37315 28 100.0 33 ............................ AAGATGGTCCAGTGAAAAATACATCAATACTGT 37254 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 13 28 100.0 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : TTAGATATCCGCAAATGGCTTGAACGTTTAGAAGATTATGTGCATATCACTTCTATTCGTGAAGTGCCTCAAGACATCAAAGGCTATGCCATTTATAAACGCAAACAAGTGAAAAGCAATGCGCAACGTTTAGCTCGTCATCGTGTAAAACGTGGTGATATTGGTTTTGATGAAGCACTTGCAAGATATAGCAATGTGGTGACAACAACTGCATTGCCATATATAGAGATGAAAAGCTTAAGCAACTCAACTTCTAGTGATGATAAACGTTTTAAATTGTTTATTGAAAAGCAACCTGCGACAAAATCTGAAACTCAGGTTTTTAGCACTTATGGATTAAGTTCGGTATCATCTGTACCCGAATTTTAACCCAATATTTTTTCATTCTTTAACAGTATAATAAAATCAATAAGTTATGATGGTGTCTTAAAACTTGGGTCTTTTTATGGATTTAGGGCTTAAGTTACTATTATAGCTTTATTTTTTGCTGTAAAATTGCT # Right flank : TAGATGATGAGGGCAATTAAATATAGGGTAAGTATAAATAACTTCATTTTGCAAAAGTGTAAAGAAATCTTGGTGATCAAAACAACTTTTGCTAAATTGATCAACTTTCAATAAGAAATAAGAGTCAACATATATGCACAACAGTATGATTAAAATTGCTTTTACATTCGCAATGCTATCAAGTTTGAGTATGTTTACAGCTGCCCAAGTACCCAAAGAGATTGATCAAATTCTAAAACAAATTACATTGCCTTTGCAAAAAACTGAAAAAGAATCTGAGATTGTGACCAATTATTACTATCAAGATCAATCAAAGAATAAGCTAGTAATTGGTATAGCATCCGATTTTATTGATGTCAGTTGGACGTTTAAGACCTTGCCTGATGAAAAATCAGAAGTTGTCACTCAAGCCAAAACGCTAACACAAAGCTTACTTGGTGAAGAGTGGAACAGTCTGTATAGTGCAATCACTGAAGGTGGAACAGTGGATTATTTATCAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //