Array 1 533-1049 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV836271.1 Corynebacterium sp. HMSC074C04 Scaffold830, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 533 29 100.0 32 ............................. CGGCGCGCGTTACCTCCAGGTACATCACCTGA 594 29 100.0 32 ............................. CAGGGGTAGTAGCCCAGCCCCGTCCCGCATCC 655 29 100.0 32 ............................. CTAGTCGCGTGGAAATGCCGCAGGCTCTTGAC 716 29 100.0 32 ............................. TGCTGGACGATGCCGAAACGGTAGACGATGAC 777 29 96.6 32 ............................C ACACCTGCCGCAGGGTTCCGGACAATCACCTG 838 29 100.0 32 ............................. CGTCCAGCAGGATTGGGTCGCGGAACGTGAAC 899 29 100.0 32 ............................. ATGCCTGTAACAGTTACCACAGACCGGGGCGA 960 29 100.0 32 ............................. GGCGTGCCGTTTGAGGTACCGGACGATGTGAT 1021 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 9 29 99.6 32 GGAAATACCTCCGCGTATGCGGAGAAGAG # Left flank : ACCGGTGGGCGCTGGAAATAGAACATGTGGAAATACCTCCGCGTATGCGGAGAAGAGAGCACCAGCCCACCCCACGCGCTGCCGTTCACGGAAATACCTCCGCGTATGCGGAGAAGAGAAACAGTTCTTGCGGGTGCGTGGCCCTTTGACGGAAATACCTCCGCGTATGCGGAGAAGAGTACTCGGTGAGCGTCAACACCCGCTCGGGTTAGGAAATACCTCCGCGTATGCGGAGAAGAGCGCGCCCCAGGGCCGGGCATGTCCCTACAGGTGGAAATACCTCCGCGTATGCGGAGAAGAGTTCGGCACGATTATCTTCATGGCGCTGGTGATGGAAATACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATACCTCCGCGTATGCGGAGAAGAGACAATCACAACCGAAAAGTACGAATTCGAACA # Right flank : GAGTTCCCGACCTGCGGTTTTTACGAAGAAGTTTCTTCAAGTCCGCGAGTTTCGGCAGATAAGGTCACAGGCAGCAACAGACCATCGAAGTCCTGAATCACTCGGCGATTACTCCCCATCGTATTTACGGCGAACCCCTGCTCTCGGGTGGGATCATTATTAATCATCGTTAGACGTCCCTCCCCTATAGCTCGGCTACACCGGCCCCATAGATTATCACGAACGCGTCTCGACACGTTACCGACAAAAACTCCAGTATCAACTTCAACTAAGAAACGAGTTAGATACCCTCGGAGATGTTCCGGCAAATTAGATGCAGTAAGTACCAAAAACATAAGGGACGCACCTACTGTTACTGGGGTCGATTTCCATACTGTGTATGCCCAGCCACTTCGTCGCCCCGTCCCGCAATCAACCGGTCATCGTCTCTTTCTGGCAGATACGGTTCGAGAATCTCCATTAATACTCCAATCATCTCTTTCAACATGCCCCTTCGATGA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAAATACCTCCGCGTATGCGGAGAAGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.20,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 1 1-700 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV836264.1 Corynebacterium sp. HMSC074C04 Scaffold1264, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1 29 100.0 32 ............................. CACACAACTACTAGCCCAAGTAGACAACAAAA 62 29 100.0 32 ............................. CAGCACCCCGTGTTCACACGAACCCGCATCGC 123 29 100.0 32 ............................. AGAATGAAATCACCACGCTTAGCCTCAAACTT 184 29 100.0 32 ............................. CTCAGTCAGGAAGACCTCGCAATGCCAAGCGC 245 29 100.0 32 ............................. TTGACCGACCGGGCTGTGTCGGCTGCTGACCG 306 29 96.6 32 ......................A...... ATTCACCCGCACCACATTCGGAGTCGGCCCCG 367 29 96.6 32 ............................T GAGAGCGAACTAGAAGCAACTCATGATGAGGA 428 29 100.0 32 ............................. ACTTCTTCCTCGGCGACCGTGTAGGCGGGGAA 489 29 96.6 32 ............C................ CATGAGATGGTCTGCCACATGAGATACTTCCT 550 29 96.6 32 ............C................ ATTGAGCAGTTGGGCGCAGGTGCGTCGATTCG 611 29 93.1 32 ............C.....C.......... TGGCAAGCCTTCCTCCGCGACCACGAGCAGGA 672 29 86.2 0 ...........GC...........G...T | ========== ====== ====== ====== ============================= ================================ ================== 12 29 97.1 32 CTCTTCTCCGCATACGCGGAGGTATTTCC # Left flank : | # Right flank : TCAGGTACCAAGCGTCAAGCTCGCCACCTACCTTGTGGCCCCAGCCTCAACCCCCTACCGCTTCCGCAGCACCAGCACCAGGTTCGACACCGCGAACTCGCGCAGCCCTGGCACGTGCACCATCCACCAGGCCCACCACGGGTGGTAGCGCGGGAAAGCGGCCAGCAGCTCGCAGTCGCCAGCCTCCGCCGCAGCGCGCGCCCACTTCAAACCTTCACCGCAACCGACCTTGAACAGGGACTCGCCAAAGTAGTTCTTCGGCCGCTTGCCGTGCTTCTTCTCATACATGCGCCGCGCGCGGTCGCCACCCAGGTAGTGCGTCATCCCCATCTCGTGGCCGCCGAACGGGCCGTACCAAATGGTGTACGAGTAAACGACCAGTCCGCCCGGCTTGGTTACACGCAGCATTTCCTCACCCATCGTCCATGGATCGGGCACGTGCTCGGCAACGTTCGATGAGTATGTCAGGTCAAAAGCATCATCGCGAAACGGCAGTTCCA # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCTCCGCATACGCGGAGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //