Array 1 36991-39539 **** Predicted by CRISPRDetect 2.4 *** >NZ_SRPG01000004.1 Paracoccus liaowanqingii strain 3058 Scaffold4_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 36991 28 100.0 32 ............................ TATCTGGCCACCAACTCGTGCGCCGGCAACGA 37051 28 100.0 32 ............................ TCGAGGCGCATCACGGCGTCGCGACCGACGCT 37111 28 100.0 33 ............................ CCCGTCGAGGGGTCCATGGTGATGGTCACGTCA 37172 28 100.0 32 ............................ ATGCAGAGAGGCCCTACCATTCAGGACATGGC 37232 28 100.0 32 ............................ ACTTGGATCAAAGCGTTCATCCGGGCAGAAAA 37292 28 100.0 32 ............................ ATACCGAACCAAGGAACAACGATGTCCAAACC 37352 28 100.0 32 ............................ GAGATCAAGGATGCCCGCCACCGCCTCGATCT 37412 28 100.0 32 ............................ CTTTCGACGAGTCGGGTCTCCAGCATGTCTAT 37472 28 100.0 32 ............................ CACCGCAAAGGCCCCACCAGCAGTGTTGTAGC 37532 28 100.0 32 ............................ GTGCAAGCTATGCGTGAAGCCAACTGGAAGCC 37592 28 100.0 32 ............................ AACTCGAACTCCGACAGCTGGTGCCGCTCGAC 37652 28 96.4 32 ..T......................... TGCAGCTTGGCCTCGGCGAGGTTCTTGAGGAC 37712 28 100.0 32 ............................ GTGGGTGACCTTGGGGCCTATTACCATCCAGA 37772 28 100.0 32 ............................ AACAACGTGGCCGACGCCTATGTGCTGAACCG 37832 28 100.0 32 ............................ CGGCGCGCGAACTCACCGCCGAAGTCGCCGGT 37892 28 96.4 32 .....A...................... TGCCCACGCACACCGCGAGCGCGCCTGTCGAT 37952 28 100.0 32 ............................ GGACATGTCGGCGGCATGCTTGAGGCGCGACA 38012 28 96.4 32 ..T......................... AGAGTGTCCCCCGGCATTGCCAGCGTGATTGC 38072 28 92.9 32 ..............A............A GCGAAGGTCATGAAGTCATTGGCCCGGTCGTC 38132 28 100.0 32 ............................ GTCACGCATCGCCCGCGCCAGCCTCTCGATCA 38192 28 96.4 32 .......A.................... TTATCCCGATCCGGACCGAAAACATGCTCTAT 38252 28 100.0 32 ............................ TGTCCGTCTCGACCATGCGCAAGCAGCCCACC 38312 28 100.0 32 ............................ AGATCCCGCGGGGTGCGGTGAGGGTTGCCATC 38372 28 100.0 32 ............................ ACGGGATGCGGGTTTCGGTGATGGCGTCCATG 38432 28 100.0 32 ............................ TGAACGGGCTGCAGAACCTGCGTGCCGTATGA 38492 28 100.0 32 ............................ AATTCGGCGCCGGGAACGCCCGTGAAGCGCAG 38552 28 96.4 32 ................A........... AGGGTGATCGTCAGGCTGTAGGCATTGGCCGA 38612 28 100.0 32 ............................ TTGCAGCGGTGGGTGCCGTCCTTCGAGGTGCC 38672 28 100.0 32 ............................ ATGAAGGACGGCGAGGGCGGGGTTCGGCCCTG 38732 28 96.4 32 ...........C................ TCTTGCCATCACAGGAGAACCTAATGGCAATT 38792 28 96.4 32 ...........C................ TGCGCGGCAGGCACCGGGGCCGAAACAGACGG 38852 28 100.0 32 ............................ CTACGATCGTTATGTCCTCTACAACGGCATCA 38912 28 100.0 32 ............................ CGGATGGCGTCGGCGGTGGCCGCGTTGGGGAT 38972 28 100.0 32 ............................ CCATTGCTTAACCGTGCGGCATTTGCTGAACT 39032 28 100.0 32 ............................ ATCAGGTGGGCTCCTTGAGTTTGGCGAGGGCG 39092 28 100.0 32 ............................ TGGCGGGGCGCTGAGGGGCGGAATGAGGGGAT 39152 28 96.4 32 ...................A........ ACCGTCCAGAAAGGATACCCCCACATGAAGAC 39212 28 96.4 32 .............G.............. ATGTCCTTCTGGCCGCTGCAACGCCAGATCGA 39272 28 100.0 32 ............................ CCAATACGAAGACGCCCTCCGGGAGGCGATGG 39332 28 100.0 32 ............................ TCTGCTGTCGTCCTGCGTGAACCGGGCCTTGA 39392 28 100.0 32 ............................ CTCAGCGCCCCGCCAGGGGGCCGTCTGCTGTT 39452 28 96.4 32 ....A....................... TGCTGGGGTCGGCCAAGAAAACTTTGGCACAA 39512 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 43 28 99.0 32 GTGTGCCGCCGGATGGGCGGCTTAGAAG # Left flank : CTTCGGAGGTTCTCTTTCACCTGATAGTCACCGATGCACAGACTGAAGAGTGGAAGGTCGACCGGCTGCCCGGCAGGACAAACCCACTCACTGAGCCCGCCATGATGCTGCAGCGGGATGCGGAACCAGCGGACGTCCTTTTCGAGGGCCTGCACGAGGCGGTTTTGACCGAGCACTACGGTGGTGATCTACCCGGCTCGCGCCGGATGAAGTCCGAACTGCAGATCTCTTGGCCGGTCTACGGTGCGGGCGGCGATATCGGAAATGTCGTTTACAGCACCGGACTTGGTCTCCGTCGGGCGCCGGCCGAGGCCTCCTTCGCCCAAGATGGCGAGCCGTGACGACGGAACAAGCAAGATCATCGCTCCAGGGTTGGATTTTAAGGCGCCCCTCAACATTTTGAAATATTTGAGAAAAAGAAATGTCGCGAAAGCGAAGATCATCTTTACGATACTTGGATACCCTGTTGTAGTTCAGGAATATTACGTTTTTCTTGGAGG # Right flank : GCGAGGGATGCGCTTTCACCCGCCGGGCATGATGACAAACCGGGAGCGCACCAGGATCCCGCGCGGCAGGATCGCAGCCCGCGTGCCGTCGTCCCACCCCTGCCCCATGTCGAGCTCACCGTCACCCTGCGCCCCATGGCTGCCGGGCGCGAGGTGGTCGAGGACTACAGCCATACCGGCCTGTCCCTGCGCCGCCACCCGGTGGCCTTCCTGCGCGCCGGCCTGACGAAGAACCGCATTCGCACCTGCGCCGAGGCCATGGCCGCCCCGAACCGCCGCTGGACGGAGATTGCCGGCCTTGTCCTCGTCCGCCAGCGCCCTGGCTCCGCCAAGGGCACCATGTTCATCACCCTGGAGGACGAGACCGGCATCGCCAATGTCGTCGTCTGGCCCAAGGTCTTCGAAGCCCACCGCCGGATCATCCTGTCGGCCGGGATGATTGCCGCCGCAGGACGCATCCAGCGTGACGGCGAGGTCGTGCATCTGATTGTCTACCGTCT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTGCCGCCGGATGGGCGGCTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.60,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //