Array 1 25586-26590 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_MPIE01000038.1 Escherichia coli strain 15_Esco_HA-NL 127219M_contig_38, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     25586	    29	 100.0	    32	.............................	GTGACCATAAGGGCATTTCATACTGCCTTGCT	
     25647	    29	 100.0	    32	.............................	GTGAACGTGACAACGCCCGCGACAGAAACGTC	
     25708	    29	 100.0	    32	.............................	GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC	
     25769	    29	 100.0	    32	.............................	AAATTAATTTCGAAACGGGCGTTGATGGTGAA	
     25830	    29	 100.0	    32	.............................	GCTGGCGCACCTTACGCAAAAATAGACGTAAA	
     25891	    29	 100.0	    32	.............................	TTGGTATTAACGGGAATGTAGTCACTCCAGGA	
     25952	    29	 100.0	    32	.............................	GCGATCGTATTTTCCGCTACGTCGCTCAAATG	
     26013	    29	 100.0	    32	.............................	TCGTTGATGGTGTGATGAGTGTACAAAAAAAA	
     26074	    29	 100.0	    32	.............................	ACGACTGAATCCGGCGAGGCTATCAACTGGCC	
     26135	    29	 100.0	    32	.............................	CCGCACACGTCGAGCTGGTGGGGATTAATGCT	
     26196	    29	 100.0	    32	.............................	CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA	
     26257	    29	  96.6	    32	............................C	TCTGTGTATTCGCTACCAGCCAGCACCGGTAC	
     26318	    29	 100.0	    32	.............................	CAGGGTAACTGGCTGCTCCTCAACCATTCCGC	
     26379	    29	  96.6	    32	........C....................	GGGTTTTAGCGACCGGACCAGAGTACGCAACA	
     26440	    29	  96.6	    32	........C....................	TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT	
     26501	    29	  96.6	    32	........C....................	GGAGTGATGAATTGGAAGTAACGGATAACCGC	
     26562	    29	 100.0	     0	.............................	|                               	
==========	======	======	======	=============================	================================	==================
        17	    29	  99.2	    32	GTGTTCCCTGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT
# Right flank :  GGACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAA

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCTGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [5,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-11.30,-5.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [71.7-43.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.55,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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