Array 1 1370534-1370169 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP030020.1 Streptococcus suis strain ISU2514 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1370533 36 100.0 30 .................................... TCAATACGTGACGTATATTTCATAGGTTCG 1370467 36 100.0 30 .................................... TAGTAACAAATAAAGAAGTAAAAGAGGAAA 1370401 36 100.0 29 .................................... GGATTATTGAGTGGGTTAACATCTGCAGG 1370336 36 97.2 30 A................................... AACATCAATGTATTTCTTTTCGACCTTGTC 1370270 36 100.0 30 .................................... CTTCTGGTAGTTATCCCCATAACATTTGTA 1370204 35 83.3 0 .......................T..T.-....TCA | T [1370180] ========== ====== ====== ====== ==================================== ============================== ================== 6 36 96.8 30 GTTTTTGTACTCTCAAGATTTAAGTAACAGTAAAAC # Left flank : GGGGCATAGAGACCAGTTTTCGTGACCTAAAATACAGTATCGGTCTGACTCATTTTCATGCAAAAAAGAAGGAAGGGATTCTCCAAGAAATCTACGCTCGCTTTATCAATTTTAATGTTTGTAAATGGCTAACCTCACACGTTGCTATTAAAACATCAAAGTTAAAACAGACTTATAAAATTTGTTTTTCAGACGCTGTTTATGCCTGTCGAAAATTTCTTAGAAACAAACTCACTTCCTTCCAATTAGAAACCTACATTGCCAAGCATTTATCCATCATCCGACCCAATCGAACGTTCCAAAGAAAGATAAAAAGCAAGGCACCTGTAAGCTTCACTTATAGAGTAACATAATAGTTGAAAAATAGGGATAAAAAACCTCCTTTTTGTGCGCCCTAAATACAAAAACTATTCCCGTTTTGTCATGAACTGCTCAGACGAGAATAGTTTCTTTAGCTGCTTAAATGCTTAACTTAATGACATTGGGTTGCCATTGAGACC # Right flank : TAAGCGATAGTACATCTCCCCCACAATTTTCTAAAATTCTTGTTTTGTCTTGCTTGCTTCATGCTATAATAGTTGTATCAGTTTTTTAAAAGGAGACAAAGATGACAAACCTAAAAGAGCAGGTTGGGATTAAGGCGGCGGAGTTTGTGACGGACGGTATGATTGTTGGGCTGGGGACTGGTTCGACGGCATACTATTTCGTGCAGGAGATTGGCCGCCGGGTTGCAGAAGAAGGGTTACAAATCACAGGCGTAACGACCTCTCATGCTACGGCAGAACATGCTGCGTCCCTTGGGATTCCCCTAAAAAATATCGACGAAGTCGAATATGTGGACTTGACGGTGGATGGAGCAGATGAGGTTGATGGTGACTTCAATGGGATTAAAGGCGGTGGCGCAGCGCTTCTCATGGAGAAAGTGGTAGCAGTCAATAGCAAGGACTGCATCTGGATTGTGGATGAGTCTAAGGTGGTTCAAACCCTAGGAGCCTTCAAGTTGCCG # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACAGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //