Array 1 35070-38039 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJHW01000006.1 Roseburia sp. 831b contig000006, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================================================================= ================== 35070 36 94.4 30 ......G............A................ TCTCCTATAAATGTTACGGGAACAAAAAAT 35136 36 80.6 29 ......G............A...TA...A.....TC GGGGCTACTTGGCATCCAACAACAGGGAC 35201 36 75.0 129 A......A..T.T......A..AA....A....T.. GTATTTTTGCTATTTAACACCAATTATATTTCTGATTAATTTTGACAGTTTAATAATAGCATATTATCTCAAATATTCCCATCCGTCTATATATCCAAGTTATATTTACATTACACTTTATTGCTCATA A [35228] 35367 36 83.3 30 ...AC.GA.TT......................... AAGAAACATTTACAAGCAAACAACCGAAGA 35433 36 100.0 30 .................................... AATGGAGGAACACGATCAATTGGAACGATT 35499 36 100.0 30 .................................... CAGAAACAGCCGAAAAAGCGGCTGTTTCTA 35565 36 100.0 29 .................................... ATAAAATTCCAGTTGAGGAATTTGTAGTT 35630 36 100.0 30 .................................... AGAGGAAGTAAACAATGAGTAAAGAAGATT 35696 36 100.0 30 .................................... AAAGTATAACGCATAGGGTCGTGTTGTGTG 35762 36 100.0 30 .................................... CCGTCATGTTGGTTGTGCGCTTTTTCCTTA 35828 36 100.0 29 .................................... TAAATTTGAAAAAACTTTACATAATTTAC 35893 36 100.0 30 .................................... CTTTTTAAGTTGCCGTTGTAAACTGTTCCT 35959 36 100.0 30 .................................... AACCTTTTAAAAGGTGGGGAAGTTGCTGAC 36025 36 100.0 30 .................................... AGATTTATGACGTAGAGGGGGTGGCAAAAA 36091 36 100.0 30 .................................... ATATGGCAATACGACATAAGTATAGCAGGG 36157 36 100.0 30 .................................... TGGTTGCATAGTTTACAAGGTATTAAACAA 36223 36 100.0 30 .................................... ATTGGCTCAAAAATCTAAGGTTACGATTCA 36289 36 100.0 30 .................................... TGTGCTTTGAAACACACAATTTTCCATCAT 36355 36 100.0 30 .................................... TTATCAACTGACCCTGGAATTAATTTTTCT 36421 36 100.0 30 .................................... AAACTGATAACATTAAGGCGGTGCATATTG 36487 36 100.0 30 .................................... GAAATACCATTAGACCCATCTATATATGGA 36553 36 100.0 30 .................................... TACCATTCATACAGATTAAAGGTTCATTCC 36619 36 100.0 30 .................................... TAATGAAGATATATGCACTTTTGAACGCTT 36685 36 100.0 30 .................................... GAAATACCATTAGACCCATCTATATATGGA 36751 36 100.0 30 .................................... TCTGCACGGATTCTGTTGAATACTCCGTAC 36817 36 100.0 30 .................................... AGCTTGGTGCGATATATATTCGCGTGTCTA 36883 36 100.0 30 .................................... TAATGAAGATATATGTGTTTTTGAACGATT 36949 36 100.0 30 .................................... GTCAATGTACTCTCTGAAAAATTCCTTACA 37015 36 100.0 30 .................................... ACCTGTTCTGCGACAGGAACTACATAGGTT 37081 36 100.0 30 .................................... TACGGCATGAAAGAAATTGACTTTATCAAC 37147 36 100.0 30 .................................... AAGTCCAAGAAGAGTTAGAGCAAATAGCTA 37213 36 100.0 30 .................................... TAACATCTGTGCAATATATCTCACAGCATC 37279 36 100.0 30 .................................... CAAGAAAGGTAGTTGAGTAGGGAAACCCTA 37345 36 100.0 29 .................................... TCAAAGTAAAAACCTGCTTCGCTTTCATT 37410 36 100.0 30 .................................... ATTGATATTGAGCGAAAATTAAAAAAACTA 37476 36 100.0 30 .................................... ATTACATTGATATTATCTCCACGGTCGTAC 37542 36 100.0 30 .................................... TCAATTCGCATAACATCTTCGCCATCTTTG 37608 36 100.0 30 .................................... ATTTTTTGCAAAAAGAGGTTGACAAGATTG 37674 36 100.0 30 .................................... TGTGCTACCTTGAGGAAGTCAATTTCTTTA 37740 36 100.0 30 .................................... TGTATTAAGTGCAATGTACTGAGCTGAACA 37806 36 100.0 30 .................................... AATATATTTCATTTCTTTTTTCCTTTCGTA 37872 36 100.0 30 .................................... ATTGTAATAATTTACAATTACACTGTATAG 37938 36 100.0 30 .................................... TAAATACTAGGAACTGTTGACACTTTCAAC 38004 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================================================================================================================= ================== 44 36 98.5 32 GTTGTAAGTCCCGGTTATTGCTTGGTATGTTATAAT # Left flank : ACTAATTTTTCCATCAATAAAATTCTGAACATAGTTGAATATTGTATCGTCGGCCATTGGTCCCTCAACAATATCATACTCATGTGGTCTACCAGATCTGCATGCTGCAATAAAATCAAGCCACTCCTCCGTCATCTGTGGAAACTTTTTTATATTTAACTTATCATTCGGCATATATCTGTACTCATTTAAATATCCTATCCCATCAAATCTTGTTGCCCATCGAATCGCCTGTTCTGGATACATAGTACAATAAAAGCCAAAATAAAAATCCTTGTGGAATCTTTGAATTCTGATTTCTGGGAATTCAACAATCTCTTTACTCCCATGGTATAGAATAATTTCTTTGCACAAATTGATTTTTCCCCTTTCATATTAATTTGCTTTCCGCGTCTTTGCGTGTTTATATTAGCTTATACTCAGCATAATATAATAATCATTGTATTTTGTAAAGTTATTTGTTATATTATTGATGATTACATAATACATTATGCTGAGTA # Right flank : TAGGGCCGGAAGAACCCCACAAAATCCAATGGATTGAGTGGGGTTCTTCACATTTCAAAAGACTATTTTCATGTTCAAAACTAAGTTAATTATACTGTTTTTCAAAAAATATTTAGCAATTCTGTTGAATCTGAATCATCATCAAATGTCTTTTCTCCTAACAACACTTCAATGGATTCATATTGCTTTTCTGTAAGGGTAAGTACACGAACAGAACCTCGTTTGGGTAAATTTTGTTTCAATCGTGATTCATGCATTGCAATTGCGTCAGTTCCATTGCAAATACGAGAATATACTGACCACTGTATCATATGATAACCATCTTTTAATAAAAACCTGCGAAATTTTGCCGCTGCCTTCTTTTCACTTGGTGACACAACCGGCAAATCAAAAAATACTAATAATCTCATAAACTTATTCATAACTATGCACCTGTAACGGCATCAGTTCTGGCAAGTCAAGCCCTGTACGATTGCCCTGCAATGCGCTGCTATAACTTG # Questionable array : NO Score: 6.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.18, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAAGTCCCGGTTATTGCTTGGTATGTTATAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTGTAAGTCCCGGTTATTGCTTGGTATGTTATAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [25-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //