Array 1 11573-11148 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABTVI010000005.1 Dendrosporobacter quercicolus DSM 1736 Dque_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 11572 30 100.0 37 .............................. CTGTTAATGCTGTCCAATTTATTCCCTCCTTTTATGG 11505 30 100.0 35 .............................. ATAAAAACAGCCCCAGCAATGGAGCTAACGGCAAT 11440 30 100.0 36 .............................. ACAGGTCATAGTTGAGCTCAATGATCCCATGGTAAA 11374 30 100.0 36 .............................. CTGCGCAAATGGCAATTGCGGATCCGTCATGTCGTC 11308 30 100.0 35 .............................. CAAAAATGAGGATTCGAATGGGGTTAAGTTGTATT 11243 30 100.0 36 .............................. TTTTGGGATACGCAGCATAACTTTGCCTTTTATTCC 11177 30 93.3 0 ..T.......................G... | ========== ====== ====== ====== ============================== ===================================== ================== 7 30 99.0 36 GGGCAACCAACACATTAGATGTATTGAAAT # Left flank : ATTTTCAAAACTATATGAATGAATATGCTGACGCCAATTGTATTGAAATAAATGAAAAGAAAAGAATGTCAGATGATAAGATCAAAAAGATCATCCAAAAGTATGCAAAAGTTAAGATGCCTACCGAATTGCAAAATATGGAGAAAACAAAACGAGATGAAATAGTAAGAAAAATAAAAGAAATGAATGGTATTTCAACACGGCAAATAGCAAGACTAACGGGCATGAGTCAAAGTGTGATAGCTAAAGCTTAACTCATTAGAACCGTCCCTTTGAGTACTAGGGAACGATCATAAGAAAACTGAGTCGCTGATCATTTGATTTTTTTCCAAGCAGGCTTGCCGGCAGGGGGAGGGAAAGTCTTGTAAATAGCAAGATTGCGGGGTTTTTGTCCTAAATCTGCAAGGCATGCTGCCCCAGTTGGAAAATTTGGGCTAAACCCATTGTAACTGCTGGGATTTTTGATCATTCAGGTTGTGAGAAATACAGCGTTTCCCTTG # Right flank : TCGAGACAAATATCCCTCCGCAAACAGCAACAAGTTGGGACCGATTTTTATGTATAGCGGAAAAAGCAGGTTATGATAATTCCGGGTTCCGGATAAACTAATTTTAGCTCAAGCTGTGATTAGAGCAAATTTAGCGGTAGGCGGACAAAGCAGAGGGGGCTACTGATGAACATTTATTGTGATATTCTGAAAATGGGAAAACGATTGGCGCAAAGCAAAACAACGCCGCGCCTTACCGTCATTGACACGCTGCAGGTAGTTTTGCAGGAACTGAGCAGGGGCTGCAAGACTGCGCCGTTATTGAATGCTTCAGCGTTGCTGGACGATGTCGCGGAAGTTTGCCGCTATACTTATAATTATGAGTCCGGGTTGGATTATGGGAATATTGCCCCGGTTTTTCCCAGTGTCTGGATTGAACTGGCTGATGCGCAAACGGCTGTAAATCTTGCCGCCTTTGTCGTATATACGGAAAACAACGGCCAGGCTGATTTGGCCGGGCA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGCAACCAACACATTAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 2 14701-14408 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABTVI010000005.1 Dendrosporobacter quercicolus DSM 1736 Dque_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 14700 31 96.8 35 ..............................A GAAGAAGGGCAGCAGGTGAAAATTGAGGGCGAGAG 14634 31 100.0 34 ............................... TTTGGGGATAATCCGTACGGTGAGGCTGTACTGG 14569 31 100.0 35 ............................... GACTTCTTCTCTTTCAAGTTGCTTGATAATCTGCG 14503 31 100.0 35 ............................... ACAGGCGTATGTTAAAATCAGCACTGTCTGTTACG 14437 30 80.6 0 ...................TC..A-.CC... | ========== ====== ====== ====== =============================== =================================== ================== 5 31 95.5 35 GGCAACCAACACATTAGATGTATTGAAATTT # Left flank : AAAAACCAATGGTTTTTTTTGATATGGAGGATAAGGAATGAGCAATGTTAATTATAACTATGCTTTTATTTTTTATGATATTGGCGAAAAGCGGGTTCAGAAGGTTTTTAAAATTTGCAAGAGATATTTTAAACACCATCAGAAGTCGGTATTCCGGGGGCATATTACGCCGGCTAATTTAATTGAGTTAAAGAATGAACTTAATAAAATTATTGATAAAGAAGAGGATTTCATCACGGTGATTAAGTTGAAGAGTAAAGCCGACTTTAGCGAAGATGTTCTGGGGAGCGATCATAAGAAAACGGAGTCGCTGATCATTTGATTTTTCCAAGCAGGCTTTGCAGGCAGGCGGGGAGAAAGTCTTATAAATAGCAAGATTGCGGGGCTTTTGTCCTCAATTTGAAAGGCGTGCTGCCCCGGTTGGAAAATTTGGGCTAAATCCATTGTAACTGCTGGGATTTTTGATCATTCGGTTGTGAGAAATACAGTGTTTTCCTTGG # Right flank : TTCATTCTACTTTCACCTGATATCTGGAGCCCTGCAATTTCAAAGAATAATTTAATAGAGGGTTTATACGAAGAAATTACTATTCTCAAAATTCTGCTACTGCCCACATCCCCGGCCAAGGACGTATGGAACATTTTTTGAGTACAGGCCAGATGGTTGATCTTTCTGATAACATTGCTCAAATATTGAATATTAAAAACAAATTAGTGATTTAGGTAGTGGCTTAATTAAGACAGTAGTATAATTAACATATATTCCAGGGATTATTTCCCAGTATCAAAACATTTAAGAAAGCCGGTAATAACTTTGAATAATGCAGCGAAAAGAAATCCGGTAGTCACGCTCTCCTTAATTACCGCAGCCTGCCTTATAGGTGATTCTATGTTGTACATTGTATTACCAACGCATTGGAAGGAGGCGGGCTTAAACTCTTTATGGGAAGTTGGAATTCTCTTATCAGTGAATAGACTTGTACGAATACCGCTAAACCCACTTGTCGG # Questionable array : NO Score: 5.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCAACCAACACATTAGATGTATTGAAATTT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.50,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 3 25945-25190 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABTVI010000005.1 Dendrosporobacter quercicolus DSM 1736 Dque_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 25944 30 100.0 36 .............................. CAGATAGCCCAATCAGACATAACTTGCGTACTTCTT 25878 30 100.0 35 .............................. AAGAAATTGAAAGCGATAAAATTGATTTTACTGCC 25813 30 100.0 36 .............................. CTTGGTAACTTACCCGCCTGATGATGGCCTTTATAC 25747 30 100.0 36 .............................. TAAAGCCAGAATCAAACAGGTTGGCGTGGATTGCGG 25681 30 100.0 36 .............................. AGCAAACAGGATATATAAAATTTCCTCCAACGCTAG 25615 30 100.0 36 .............................. CAAGCGTAGCATTATAACCACCCCTTGCGCTTAGTA 25549 30 100.0 37 .............................. GCAGTCTAATTAATAGGCAATTGTACAAGCCGACTCA 25482 30 100.0 35 .............................. CTACGGCAGAAATCCACAGACCAATAGGTCGGCGG 25417 30 100.0 36 .............................. CAAAATCGGCTAAGCTGCCGCCCTTCCAGTTATTCC 25351 30 100.0 35 .............................. ATGGCGCAGATCGCTAAAACAGCATCCCAAGCCGA 25286 30 100.0 37 .............................. CCATGCGGTTCAGGCGGCATACCCGGAGATGGTTCCT 25219 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 12 30 100.0 36 GGGCAACCGACACATTAGATGTATTGAAAT # Left flank : CTCAGAATTGGCTTTGGGCTAATGTTTATGTATTATGGCTGGCCGAAAATAATGGCCGGACCGGCTGCCTGGGCCAAGCTGGGCGGAGCAATCCAGCCAATGTCCTTGGCTGTTTTATTCATAAGCTTAATCCTAATCGGACCGGGCCGGTAGCTTCGATGACGGCTCCCGGCTCAGATAGCTGAATTTCAACGGGTGAATTGACGGTCTGTTTATCGGAAAAAATTAGCGAAGCTGACGGAAAAAATACTGCAGCGGATCAATGGCAATTGGACGCGCTACTGTACAAGCAGGCGTCAATTGCCATTTTATTGTCCTTTGATTTTTCCAGGCAGGTTTTACCGGACAGAGGTCGAAACACCTTATAGTAGAAAGGGCCAAGCCTGATTCCGGCTTTGTTTTTAAAAAGCTTGTCTGAGCTTGGAAAAAACTTGTTAAAGTCTTTGACTTTGCCGGCTTGGAAGGCGCTTGGGGGTGTTTTGAACCCTGATTTTTTCTTG # Right flank : TGTCCCCCGAACCACTTTCCAAGCTCGGCATTATCGGGCAACCGACACATTAGCGGAAGCGCTGCGTTTCAAGCTATCGGTTCATCACAATGGCGGTGTTGCTTTTTTCGGGCTTTTCTTGTCGGTATTTTTAACTATATATTCCTACTGGGAAAGGTTGAGCATATTGAGGTTTAAATAGGTAAATAAATCAAATCACCGCTTGATTATCTGTAACCAATCTTGACAGATGAGAAAGAATCAAAGACAATAACTGTATAGAAATGATTTTCATTGCTATACAGTTTTTTGCTTTTGCATTGCAATCAACTGGATAACTAAGTGAGGGAGCGATAACATGACTTTTATTGAACAGATGAAGCGAAAAGCCAAACTCAATCAGAAGACCATTGTTTTGCCTGAATCTACCGATTTGCGGGTTCTGACAGCCGTCAGCGAGGCAGCTAAAGAAGGGCTGGCCAAGGTTGTATTGACCGGCCGGAAAGCGGAGATTCTGCAGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGCAACCGACACATTAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA //