Array 1 26988-26101 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWUP01000002.1 Staphylococcus delphini strain 14S03318-1 NODE_2_length_394471_cov_68.1826_ID_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 26987 36 100.0 30 .................................... ATAGCACAAGTCGTGACTAGCGCGGTCAAT 26921 36 100.0 30 .................................... GAATGTTGATGCGAACACAGGTGTTGTTAC 26855 36 100.0 29 .................................... AGGTGTAGGTGCACACGGTGGCGCGATTT 26790 36 100.0 29 .................................... ACTAAAAGGCTCAAGTAATATTCACAACT 26725 36 100.0 29 .................................... TTCGTCGTTCATAAATCGCCGCACCTCCG 26660 36 100.0 29 .................................... AAACAGATTCTCAAAGCGTAGTAGCGCCT 26595 36 100.0 29 .................................... GCAAGTCAGCTGTTATCTCAGCGGAATAG 26530 36 100.0 30 .................................... TCTGAGGGTGAAGATTATTTCGATAAACTT 26464 36 100.0 30 .................................... TCGAAAGATTTAAAAACGAAGATAAATAAA 26398 36 100.0 29 .................................... CGTGATAGTCCCAGTGATAAAAATTGCAA 26333 36 100.0 29 .................................... ATCCCAAAGTTGCTGTGTTGCGTCGTTAT 26268 36 100.0 30 .................................... AAGTCACATCACGCGCAGGTGCTAAAGTGT 26202 36 100.0 29 .................................... GTAAAATGGCAAGATAGATACTTATAGAA 26137 36 86.1 0 ........G..............T...T.TA..... | C [26105] ========== ====== ====== ====== ==================================== ============================== ================== 14 36 99.0 29 GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC # Left flank : TATTATTTCCGGAGTCTCACCTTGGTATTCGCGATATTAAAGTATTTATGCAACTATTAAAGAAGTATCATTTCACAACGATTGTTTTCACCAATCATCCTTCTATCATTATTAATGAAGAAAACATATTTCTTTGTAAAATTAATAAAGAGTGTCATGACATTGAAAAAATAAAAGACGAAATATCATTATTTATTCCAGAAGAAATGGTGAGTCATCAATTGACTAACATGATTGCGTATCACGAGTTTTTAGGTGAAAATCTTTCTGAGTTTGAACGTTATTTTAAGTTTATAAATCATTATAATTAAGTTATACTAAACACAATATAAAAGTTTGAGGATTGCAATGCAAAACGATCAATGAGAAAGTCATAGCTATGTGACTTACTTCGTGATTAAGTTAAATTCCTACATCATTTGAGTACAATGTTTTGATCCTTTTATGAGTGCCAAGCCTCAATTTGATATATAATCGAGTTGAGATTCGTCGGATTTGAG # Right flank : CATTTAAAAATCAAATACGAACTACATTTACGTCTCTCACTATGTTTTCACCTCAAATTAAAGTTAAAGTGGAGGCTTTTTTATTTATTCGAAATTGCCACCCAACGCTTTCTGTTCCTACGCCATGTTATAATAAACACAAATGCTCATAAAAACAGAAAGAAAGTAGGGGAAATCTATGGAAGCAATTATTGCACGACAACCATTCCAATTAGGTGAAGGTCAAAAGTTTGAAAAAGTATCGCGTGAGGTACCAACACCCGAAGCGCATGATATTTTAGTCAAAGTCCATGTGACTGGGGTGAATCCGGTTGATACGAAAATACGTCAAGCGCCGTTAAATGGTGATGTGCGTGTACTTGGTTTTGATGCGGCAGGTGTGATTGAAGCGGTCGGTGATGCGGTTACGGATTTCAAACCGGGTGACCGTGTGTACTATTCAGGGTCGAACCAACGTGATGGCTCCAATCAGAGGTATCAGCTTGTGAATGAAAATTATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: R [matched GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //