Array 1 187670-189505 **** Predicted by CRISPRDetect 2.4 *** >NZ_WHZT01000002.1 Bifidobacterium sp. SMB2 sequence02, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 187670 33 100.0 34 ................................. ACATCACGGCCCGCGTGGCCGACACCGAACTCGG 187737 33 100.0 33 ................................. TGCGAGAGGGACGCTGCACTGCCAATTGTCTGC 187803 33 100.0 34 ................................. ACCGGAGGGTCCGACCACGAGATCGGCGAGACCG 187870 33 100.0 33 ................................. TTCAGCTTAGCCGCCTAGGATGAAATATGGTGC 187936 33 100.0 33 ................................. AGGTCATCGAGCGTCTTCTGCGACGCGTCGAGG 188002 33 100.0 34 ................................. CTTTCGATGATTGGGCGGGTATGAAGCCCCCGCC 188069 33 100.0 35 ................................. CACTTCCAGCATCACAGGAGACAAGGGGCCGGGGC 188137 33 100.0 34 ................................. AAACACGACGACTAAATAAAGGATTAAACATGGT 188204 33 100.0 34 ................................. CAGAACGCCTTTTGGCAGACGCTCGTACACGATG 188271 33 100.0 35 ................................. TGGCTGTAGGTCCAGTAGGTGGCCTCGGTCTTACG 188339 33 100.0 34 ................................. AGCATGCGCGGACAGTCCGAGACCGACAACGTGT 188406 33 100.0 35 ................................. CGCTTCGACCCCGAAAAGCCGTTCGCCCGCCAATG 188474 33 100.0 33 ................................. TGCCTCCAAAACCCACACGCGCCATGGACCGTC 188540 33 100.0 34 ................................. ATCCGCGGCGCCAGGAACATCGGCGGACGATGGG 188607 33 100.0 33 ................................. ACGGTACAGGGGTCGAGCCAGCCCGTCACCACC 188673 33 100.0 34 ................................. GATTCCCGCACGGTCCACTAGGGTGCCGCGTCAA 188740 33 100.0 32 ................................. CTTCCGTCGCACAGGGGGTACGGTGCGTACTG 188805 33 100.0 35 ................................. CGCAGGGATGGAGACCTGCCATCACCAGCGTGACC 188873 33 100.0 34 ................................. GGATACGACCCCCACGACGAACACGACCAGGCCG 188940 33 97.0 33 .....T........................... TCCGAGAAGGAGACGAGAGCGTTCCGCCGCCGT 189006 33 100.0 33 ................................. TCGATGGCGACGATAACCCTATGGATATCACGT 189072 33 100.0 35 ................................. GTCCGGCATGGGGAGCCTCCACCACCCGAGAATCG 189140 33 97.0 33 .....T........................... CACGTCATGGAAGGCACCTATGACACCATCGAC 189206 33 100.0 34 ................................. ATCAAATACGGCGAGGACGGCTCGTCCCTGACCA 189273 33 97.0 34 ....................T............ TGGCTCGGCCTCGCACCACACGACCTCGAACACA 189340 33 100.0 34 ................................. ACCGGGTAGGCGTTCAGGATTCCCCCGAGCATTG 189407 32 93.9 34 ...........T...-................. TGGTCAGTGTTCATTCTCACGCTCATATCCGGTG 189473 33 78.8 0 .C..........AT.......A......T..GA | ========== ====== ====== ====== ================================= =================================== ================== 28 33 98.7 34 GTCGCCCCTCACCCGAGGGGCGTGGATTGAAAT # Left flank : TATGGGCAGCGAGTGCAGAACAGTGTTTTTGAGTGTTCGGTAACGCCATCTGACTACTTGGTGTTGAAGCATGATTTAGCAGCAATTGTGGATGAAACGTGCGATAGCTTGCGCTATTACAATCTCGGTTCTCGCTATTCTTCAAAAATCGAACACTACGGAGTCCGGAGGCATGTGCCGATTGACGAGGTGATGATGCTCTGACGATAGAATGGTCATGGAGTATTTCCGTGCTTAGAGGTCGTTGGCTTCGTCATCGATGTTTGGCGCGAAAGGTAAGCTCTCATAGAATCTGCCATCTTTCGCACCTTCGTGAGTGAATTTTGAAGACGGTTTTTCCGTTCTTCTAGATGCTTGATAGCTTCAGAGTGGATGCTCCTCCGCCTTTTATGGAAGAGTTTCGCGATTTCGTGGGCGGAGAGACGAATGATTATTCGCTATAATCAGCATCGGTAATGGGCATTGTTTCCATATAATGGAATATGGTGTCCATTTCCGCA # Right flank : AAGGACTGGAACAACCCCGCCTAAGAGGCATAGATTGAAATATGAAGGAGGAATGATGACCATTCATTATCTTGGCGTTACCGACGTTGCCAATAAACTTGGCATAGCCACGTCTGCCGTCAGCGCCTATAAGCTTCCCGAGCCGGACGTCATGATAGGACGTACCCGAGGGTGGAAAGAGGAGACCATCGATGCATGGAATGCCGCTCGTCCTGGGCGTGGTGTTGGCGGAGGTCGGCCGCGCAAGAAGCCGAAGACCGACTGAAAAATGACGGGGCTTCAAAGTTAGGTGAAGAACATGGTACGGAATACGATATCGCGTTGATTTAGGATTCCGTGCCATGTTACGGGCTGTCATCGTTGATGAAATCGTTGAAATTTCAACGATGATGACTGCCTGACTTGCGTGGATTGCGGTAGGGAAGGATGATTTGGGCGAAATTGGCGTTCCGTGCCGCGAATTTGTGGCAGGGAGTGGCGATGGCGGGAGGATTGTCGCT # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCTCACCCGAGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCTCACACGAGGTGCGTGGATTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.40,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //