Array 1 1224569-1223607 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012275.1 Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1224568 36 100.0 31 .................................... ACTTTCCAAAAGCCAAGAAAGCTGGTTGAAA 1224501 36 100.0 31 .................................... CACTTCCACATTTTTGGCACCATCAAACGCA 1224434 36 100.0 30 .................................... CATAAAACATGATAAAGACGTTCAGCATGA 1224368 36 100.0 30 .................................... TATTATATGCAGATCCTAATGTTGAACTAA 1224302 36 100.0 30 .................................... CACTGATTAGTTTGGTCTCACAATCCAAGC 1224236 36 100.0 30 .................................... AAAAGTTTGTGCTGCCAATGGCAGGAACGT 1224170 36 100.0 30 .................................... CATTAACAATCGCAAACTCACCATTTCCTT 1224104 36 100.0 30 .................................... GTTTGTCCGAACCGTGCGTCATGCACATCT 1224038 36 100.0 30 .................................... TACTCAATCGCAAATTGATTCCGCACCGGA 1223972 36 100.0 30 .................................... ATCTTATCTGGCATTTCATCACACATACGT 1223906 36 100.0 30 .................................... CTGACCATAAAGCTGTATCAGCAACCACCA 1223840 36 100.0 30 .................................... CCGGTCGTCGTCGGTTAAGTACCACTCATG 1223774 36 100.0 30 .................................... GTGTGGCGTTGGCTAACGTTGTTGAGGGCA 1223708 36 100.0 30 .................................... TAATGTAAAAAAGCTTGACTGTATACACAT 1223642 36 91.7 0 .................................GAA | ========== ====== ====== ====== ==================================== =============================== ================== 15 36 99.4 30 GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC # Left flank : AGCAGATTTAAATAAAATGTTTCAAGGACAATTACAAAAAAAGATCGTTTCGAAATTAGATGATGATACAAGATTGCAATTAACGGATCTTAATAATAAATTAAAATCACTTATTTTTGATGCTACGTTTTCGTTAGACCTTCCGTTAAAAGTAGATAGTGAATTTGATCCAGTTAAATTAGTTAAATACTGTAATGTTGGGTTTGTAAGTGCTTTAAATAGGGATCCTTATGATATAATTGAAACTGTATTAAAAACTGCTTCTGAATTAAAAGAAACAAAAATATTAATCTTAACTAATGTGCGCAATTATCTCAGTGTCAGCCAATTTAATGAATTGGTGAGTTTAATTAGCACGCTTGATTTGAACATTCTGTTTATCGAATTCTCAGATAACAGATAATCACGAAGAATTCGATAAATGCCGTTATTGCTACGTTGATCAGGATTTTGTTGATTGGCGTTATTAATGTCTATGAGAGTAGCATTATAAAAAAACG # Right flank : TCAGGAGCGGCTTGACGCATTGAGGTAAAATAGTTTTAATTATTATCGTATATATAAAATAAATGAACCTCAATTGCACCAAAATCTGAACTTCATTAAAACAGAAAAGAACTACACAAGGAGCCAAGTATGCAAGTAACAGTAAAATCATTTTCAGAGTTATCCAATACAGAACTATTTAAAATCTACAAACTCCGTACCCAAGTCTTTGTTGTTGAACAATTATGTGCCTATCAAGAGGTAGACGATGAGGATCTCATCGCCCAGCATTTACAATTTACAAACGAGGCCCAACAGTTAGTGGCCTATTTACGAATCATCCCTGAAACGAACGAAACGATTGTTCATATTGGTCGGGTGGTTGTTAATCCACTCTTTCGCAAACAAGGGTATGGACGCAAACTCATTACGAGTGGACTTGAAACGATTAAAAAAGATATGCCAAAGGTCACAACGGTAAAGATTCAGGCCCAGGCTTATTTACGATCCTTTTATCAATC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //