Array 1 37235-37398 **** Predicted by CRISPRDetect 2.4 *** >NZ_JTHN01000128.1 Paenibacillus sp. A3 contig_128, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 37235 30 96.7 38 ........T..................... TCCATGGGCTATGTCCCCGCATATTCGCCAAGTTTGTG 37303 30 100.0 37 .............................. AGGCTAGGAGAGCGGCCATAGCGACGGCGTGCGGGGC 37370 29 96.7 0 .........-.................... | ========== ====== ====== ====== ============================== ====================================== ================== 3 30 97.8 38 GTTTTGAACGTACCTATGAGGAATTGAAAC # Left flank : TTTTGCAATCCCGCAGGCTTGGGTAATTTCCTCGACCGTTACGTTGTCGAAGCCCTTTTCTTTAAACAGCTTTATGGACTGTGTGAAAATGCGTTCTTTCAGCTCTTGCTTTCGGGATGCTCTAAGCATCGGGGAGGGTCACCGCCTTTTGAAAAAAAATGACTACGGTCATAATATGACTTTGGTCATGATTTTACTCCTATTTTTGGTATTGTTCAAGTATCAAAAAAGATACGAAGTATTCAAAGCTTGTGGTAAGGTAGAAGTGCGAGGCATTTTTGCAATGATTGCACATTAAATTAGGGTGACTATGGGTTGGAAAAAGGTGGACAAAGGCTTATAATTTAACTACGCTGTTTGTCGTCGACCCCCAATGATGCAAAAAAGCCGGGGGATCGACGACAAGGATAGCTGCGTGGCAAAAGGGATTACGGTGTTTGCTGGACCCGATACGTAATTCGGGAATATGTAGAAATGGCTTATTAGCGGGATTTTTATGG # Right flank : CTCCGTTGTTTTATTTGGCCAGCATAGCGAGCACATTCCACTCAACAGCGCCGAACAATGCAAGCAAAAAAAGCCTCTCGAGATCGTCTCGAGAGGCTTTCTGCAGATTAGAACGTAATCGAATGTCTGCGGTCTTGGATGCGTTCGCCGGAACGTGTTCGTTCGACATAGTGAAGCTTGTTATCCGTCATCAATAAAATCGTAGAGCTTCTCGTACCATAATGATCGCTCCGAATGTAGATCGGAGAGAGGAGACGCTCCCATTGCAGCGGTACGCCGGTGGCAGGCAGCGCATCGTCAGATGCCGGCTCCGCGTCCTCAAGCAGTTCAAACAACGCATCGACCCGGCCCTCCCGAACGTCCTCGAGCTGCGCTTCCAGCTCTTTCTTCCCTTTCGTTACCTTCGGCCAATCGGTATCCAGCAGATGGTTGCTTACGCCGTAAACACCGGGCTGGAGCTTTTGAATCTCATGACCTATGTTCGAATAATAGTACAGCTC # Questionable array : NO Score: 8.56 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGAACGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.00%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.27,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 60280-60779 **** Predicted by CRISPRDetect 2.4 *** >NZ_JTHN01000128.1 Paenibacillus sp. A3 contig_128, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 60280 30 100.0 37 .............................. CGGTAAAATTTCCTTGAACGGCGCGAATTTGTTTAGC 60347 30 100.0 36 .............................. ACCTCTCGTACAATCACGGTATACGGCAAACTCATG 60413 30 100.0 37 .............................. GTTCTTATGGTGGTTGACTATGCAACGGGGCTTATGG 60480 30 100.0 39 .............................. TAATTTACGGCCCATTGCCTGCCATCGCGCGTGTAATCC 60549 30 100.0 38 .............................. GCCGAGTCGTCCAGCATGTCCTTCACCTGCTGCATTTC 60617 30 96.7 36 ................C............. TTGTAAAGTGCTATATAGTTTCTTGGGCGGTTCTCA 60683 30 96.7 37 ....A......................... TCGAAAGCTCCTTTATGTCCAATCTAACGTTGATGAT 60750 30 80.0 0 ....A.......T...C.GAA......... | ========== ====== ====== ====== ============================== ======================================= ================== 8 30 96.7 37 GTTTTGAACGTACCTATGAGGAATTGAAAC # Left flank : GTACACGAAGTCGCTGCTGGCCGCGATCCCGGTTCCCGATCCGAAGGTGGAATCACGGAAGACGTTCACCGCTGAGGAGGAGTCCTCGAAGGCGGACCCGTACAGCTTGGAGCGCTCAAGCTTCGTTGAAGTGAAGAAGGGGCATTGGGTGGCTGTTGCTGAGGGGGAGGGTTAGGTGATAAAAGAGCGGGAGAGTAACCAATTAAGAGTCGGGTCTTGTGTTCGGCCGCTAGAAAAAATTGAAGGTAAGGACACTAAAGAGGTAGAATTAGCTTAAGCGTTATAGGAACAAACCAAAACAGAATTGAATTCTGTTGGAAAAAAGCGGGCAAAGCTTTATAATGTAATTGCGCATTTGTGTCGTCGACCTCCAATGCTGTAAAAAAGCCGGGGGATCGACGACAATGAGGGCAGCGTGGTAACAGAGATTTTGGTAGCTGGCGTGAGGGAGAATTGTTTGTTAGATATGTGGGAATAGCGTAACGACGGCGTTTTTGTGG # Right flank : CATCCTTCGGCGACTGCAGACGTCATAGTCGAAGTTGTTCCAGCTAGGCATATTTTCGGACTCCCAACATCTAGAGCTTCGAAAAAGAGGATCTGGGTTCGAAGGAAGAAAAGTCTTTACGGGTCGACACCTGTATCCGGAGCAACATTATTGGAGATAAACCTGCATCAACTTGAAGCGCTGCATACACCATGCACCGTCGTTGGAGAGGCTGCAACAAGAGCATCCTCTCCCTTGGAGGAGAAGATGCTCCTTGACACTAATGGTTTCAGCCGGACTCTTTATGTCTGTAAAGGAAGCTGTTTTACGGCCTATGCGTATATCCGTGTCGATTCTTACAATCTGAATAGATTAAGTATGAAGTGCCCGGGCCATCGCATCCATATAGCTATGAACGGCGCGCTGACTCACTTCCGCTTCTGGAACGAAACTTTCAAAAAGGTGAAAGCATCCGGGATACAAGTGAAATTCGACATCTACACCTGCTTGTGCAAGCCGCG # Questionable array : NO Score: 9.10 # Score Detail : 1:0, 2:3, 3:3, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGAACGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //