Array 1 1739845-1732555 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024620.2 Acinetobacter indicus strain SGAir0564 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1739844 28 100.0 32 ............................ GCTTTCTACTGTTGCTGCTCAAGTAATTTCTA 1739784 28 100.0 32 ............................ ATAGCGATTCCTTGATCATCTAATTTTGACAT 1739724 28 100.0 32 ............................ AGTATGTCTATGAACTTGAAGCTTTTGGACAA 1739664 28 100.0 32 ............................ TGAAATTTCGGAAACGATTTCCGTTGTATCAA 1739604 28 100.0 32 ............................ TATGAGTACAGATAACGCTATATCAGCGCCCG 1739544 28 100.0 32 ............................ TAAAAGTTGTTCTACAGCTACAGATAAAGCAT 1739484 28 100.0 32 ............................ TTGTTTGTAGTGAGCAAAATATTAGAGCTACA 1739424 28 100.0 32 ............................ AGTTTTTGAGATGTTGTCAAACCATGCAACAC 1739364 28 100.0 32 ............................ TGTACGTATACTTGTTACAAAAAAACAGTCTA 1739304 28 100.0 32 ............................ TCCAGTTCTTCCAGAAACTTGGCAAAGGTATC 1739244 28 100.0 32 ............................ TAACTGGTAATGATGCTGAAACAAATATTGAA 1739184 28 100.0 32 ............................ AGTCTAATGAGTCACCCATCAAAGCGTGCTGA 1739124 28 100.0 32 ............................ TAAACGACTGTATCAATACTACGAGTCTGCAA 1739064 28 100.0 32 ............................ TTTTCTTTTTTGAGGTGTGAGAAATGGAAGAT 1739004 28 100.0 32 ............................ TTGTTTATCAGTATTGGGGGCAGCTCGGCAAT 1738944 28 100.0 32 ............................ TTGTTTTAAACGTGTTACAAGATCACGATTTT 1738884 28 100.0 32 ............................ CCGAACTGACGCAATTAAAATTTTTTGCGCTT 1738824 28 100.0 32 ............................ ATTCTTGATAAGGCTGAAGTTAAATACAAAGC 1738764 28 100.0 32 ............................ GATAGTCAGAAAGAAGCAAGACGCTATCGGGA 1738704 28 100.0 32 ............................ AACATGGGTTAAAGACCTTCGCAAAAAAGAGC 1738644 28 100.0 32 ............................ TGTATGACGGTGTACTTGCAGCTTTTGTACAA 1738584 28 100.0 32 ............................ ATGATTCGACCTTTTGTCATTGCAATAGCTTA 1738524 28 100.0 32 ............................ AGCTTGATCTTAAACTTGAATATATTCTTGAT 1738464 28 100.0 32 ............................ AAATTGAACCGCAACGCTGAACATTAGCCCAA 1738404 28 100.0 32 ............................ ATTCGACATAGATCGGTAGGATCAGAGCGTCC 1738344 28 100.0 32 ............................ AGTAGTTGCTGAAAAAGTTATCTCAAATGCTG 1738284 28 100.0 32 ............................ AGATTGCTGATTTACATCTTGTCCCATTTGCG 1738224 28 100.0 32 ............................ GTTGTGCCTTGATGCAGAATCTGGGTGCTTGG 1738164 28 100.0 32 ............................ AGTTTCACAATACAGCCCAAGTAAGGGCTTAC 1738104 28 100.0 32 ............................ ACTACTTTATTTAGAGCTAATAAAAAGGTTTT 1738044 28 100.0 32 ............................ ATATCGTGACTGGATCCTTGATGAAAATGATA 1737984 28 100.0 32 ............................ ATTGGTATTGAAACACTTGGGGAAGGCTTTAT 1737924 28 100.0 32 ............................ AATCCGCAGTGTCCATGCGTGACTCAGAAACC 1737864 28 100.0 32 ............................ ATTGAAATATTAACTCCTCTCAATATACTTGT 1737804 28 100.0 32 ............................ TGTAGAAGATAAATATCATGTTGTTGTATATC 1737744 28 100.0 32 ............................ GTTTTGCTTCATGCAGCCCGAAAAGCGCGGAA 1737684 28 100.0 32 ............................ ACTGTAGGCAATGGTTTGTTGCTACATCCACG 1737624 28 100.0 33 ............................ CAGAGAAATACAATTCTGGTCATGCTTTCTGGT 1737563 28 100.0 32 ............................ AACTTGAGCGCATGGCAAGAATCGAAAAATAT 1737503 28 100.0 32 ............................ TTTATCTTTGTATTCGTCCAACTTATCTAAAA 1737443 28 100.0 32 ............................ GATGATTAAAGACTTGACCACTCACGGACACA 1737383 28 100.0 32 ............................ AAAAATATTTTTGAAGACTTATAGAGCTGTTC 1737323 28 100.0 32 ............................ TTCAAGCTTTTCATCGAAACCAGTGAAGACAA 1737263 28 100.0 32 ............................ TGAAAAGCAGGAGCCTGAACCTGAAAAACCTA 1737203 28 100.0 32 ............................ AACAAAAGCCTGGGAATCTGCGCTACTCGGTG 1737143 28 100.0 32 ............................ TTATAGATAATCGTGTGACATATCGGGCACTC 1737083 28 100.0 32 ............................ TTACAAAGTGGTGAATATTTCCGTAATTCCTG 1737023 28 100.0 32 ............................ ACTACTATTTATAAAATCAATAACTTAAACTA 1736963 28 100.0 32 ............................ AGTGTCCTGCTTGGTAATCATATGAAGTTCAT 1736903 28 100.0 32 ............................ AATCAAGCATTCTTGAAAGAACTGGATAAGCT 1736843 28 100.0 31 ............................ GCACAGCCTGAACAAGGTACAGAATTTCAAC 1736784 28 100.0 32 ............................ TAAGTGATATTCCTAACCTATGCAGGCAACGC 1736724 28 100.0 32 ............................ TAATCAAGCAAATAATTCGCAACCTAGTGAAC 1736664 28 100.0 32 ............................ AGATTGCTTAGTTCTACCCTGTTTAATCCAAT 1736604 28 100.0 32 ............................ TATCAGCTTCATCTCAAATTGATTCAACTTAT 1736544 28 100.0 33 ............................ TCAATTACTTGTAGTTCTTTACAGACGTATGCC 1736483 28 100.0 32 ............................ ATCATCGCGTTCGATGTAGAAGCGGTGGCCGA 1736423 28 100.0 32 ............................ AAATACCATGTAAAGCAACCCAAGGAACGATG 1736363 28 100.0 32 ............................ CAAAACAATGAAAGCCGCGCCAATATATGCTG 1736303 28 100.0 32 ............................ GTTGAGCTAATGGCGCAAAGGGTGGCGGCATT 1736243 28 100.0 32 ............................ ATTAAGACGATTGTGGAACGGGTGGGTGAATC 1736183 28 100.0 32 ............................ GCAGTCTGATGGATTTGAGCCGCCACCAGATA 1736123 28 100.0 32 ............................ TAGAACATAACTATGCAAAGCTATCTAAACGC 1736063 28 100.0 32 ............................ CAAAGCGCTTCACAAGGAAATAACCTAAAGCA 1736003 28 100.0 32 ............................ ACTGGATGCGACTCTGCGCAATGCCTGTGAAT 1735943 28 100.0 32 ............................ AAATCTGCTTCAGTCGCATACATAGATCACCT 1735883 28 100.0 32 ............................ TTTATGCTCAACGTTTGGCGCTCGATTCCCAC 1735823 28 100.0 32 ............................ TGTGATACAGCTAATCCCCCTAAACCTAATGC 1735763 28 100.0 32 ............................ AACCAGCACTGCAACAACAGTTGCCAAGATTC 1735703 28 100.0 32 ............................ TTCATATTGAATCAAAAAATAATGTAATTCCG 1735643 28 100.0 32 ............................ TGCTTTAAGTGCGTTTAACTTTTCACAAGCCA 1735583 28 100.0 32 ............................ ATTAAGCATCCATGGAAGTTTTCGAGACAGTT 1735523 28 100.0 32 ............................ ATCATCTAGGCGCGTGTCATCAGTGTTTAAAA 1735463 28 100.0 32 ............................ GTACATAGCAGGACAATGGCTGCTGTGTGTCT 1735403 28 100.0 32 ............................ TTCGTTTCGGACATGGATTGCAAGGGCGTGTA 1735343 28 100.0 32 ............................ ATTTGCACCGGATTCACCAACCTGAACAGGTT 1735283 28 100.0 32 ............................ AAGATCAATCAATTCCTTCGGCGTGACTCTGG 1735223 28 100.0 32 ............................ AATAGTAAAAGTTAGTTGTTGGTTGCCATCAG 1735163 28 100.0 32 ............................ TGATGGATGAAACGAAGTTTTATCAGGCTTAT 1735103 28 100.0 32 ............................ AATCAGGGTTAATACTTGATGGTGTTGCAAGC 1735043 28 100.0 32 ............................ GCCATCGGGGTATAGATATTTTTGTCGTTACT 1734983 28 100.0 32 ............................ CACGTGAAGCATTGATCAAAGCTGTCACCACT 1734923 28 100.0 32 ............................ ATCTGAAATAATCAAACGATAAAAAGCATAAA 1734863 28 100.0 32 ............................ TTCTAGCAAAATTTTTGTATTGGATGGGGTGG 1734803 28 100.0 32 ............................ AATCCACACTTGTCTGAATTTGGTCCATTTCT 1734743 28 100.0 32 ............................ TGCCACTGATTTTGAAGTCATCGATCCATCGG 1734683 28 100.0 32 ............................ ACTCAGCAGATACGCCAAGGAAATCAGCCAGC 1734623 28 100.0 32 ............................ ATCAAATAATAGCGGTATTGCATCAGGTTCGA 1734563 28 100.0 32 ............................ AATCCACACTTGTCTGAATTTGGTCCATTTCT 1734503 28 100.0 32 ............................ TGCCACTGATTTTGAAGTCATCGATCCATCGG 1734443 28 100.0 32 ............................ ACTCAGCAGATACGCCAAGGAAATCAGCCAGC 1734383 28 100.0 32 ............................ ATCAAATAATAGCGGTATTGCATCAGGTTCGA 1734323 28 100.0 32 ............................ GGTATACGGCGCAATGAACTTCTCCTTGAACT 1734263 28 100.0 32 ............................ TGTGGCATAAGTGATCGTGCCCTGAGAATGCC 1734203 28 100.0 32 ............................ AGTGAAACATCGGTGACAGCTTCCGAAGCAAC 1734143 28 100.0 32 ............................ AAGCATCAAGTGAGGTGAGTGTGGCATTTGCA 1734083 28 96.4 32 ............A............... AAGCCGCTTACACATAACTATGATGCGCTTGA 1734023 28 92.9 32 ...C........A............... GCCACCGTCTTCAGTGTCAGTCAAACGCTCCG 1733963 28 92.9 32 ...C........A............... GAAAAAACACTTAAAAGCTCGTCCTGGGCTAA 1733903 28 92.9 32 ...C........A............... AACCGGATTCCCATCGCCGGCCCAGGACTATG 1733843 28 92.9 32 ...C........A............... ATTTCTTCGCATCCCATAGTGCAAGCTCTGCA 1733783 28 92.9 32 ...C........A............... ACTTACGCATTTCCTAATACATTATACAAATT 1733723 28 92.9 32 ...C........A............... CAGCTGCTGAACTTCAACCGCAGTAAATTCCG 1733663 28 92.9 32 ...C........A............... TGTACCTGCATAGTCTTTACCGATACCCACAC 1733603 28 92.9 32 ...C........A............... AGAGGAAATTATTGATTTTCTCGATCAGCAGA 1733543 28 92.9 32 ...C........A............... GCGAAGGCTGGCACGGACTATGAGGCCGCAAA 1733483 28 92.9 32 ...C........A............... TGTTTGATGAATATTACTCATGCCCTGCGCCT 1733423 28 92.9 32 ...C........A............... TTAAACCATTGCGCATTTGCCGGCGTGGTACC 1733363 28 92.9 32 ...C........A............... ATTCTGGAATTTAATTCTGCGCACTTGATATA 1733303 28 92.9 32 ...C........A............... GATACAAAAAAGAAAAGCGTCAGATAATGCAA 1733243 28 92.9 32 ...C........A............... AGTGAGTAATAAGTTCCTGCCTCAATGCATCA 1733183 28 92.9 32 ...C........A............... AAAGTACATCACCGAGACTACAAAAGGCCGAA 1733123 28 92.9 32 ...C........A............... ATCTTTGAATTTCGCACCGCGCAGCAATCTGA 1733063 28 92.9 32 ...C........A............... GCAGAATTTAGCGGGGTTTTTCTTGCGTAAAA 1733003 28 92.9 32 ...C........A............... AGAATTATTTTTTCACCACATTCGCTATTTCG 1732943 28 92.9 32 ...C........A............... AAAAATATCACAACAAGATTGTAGACGTTGGC 1732883 28 92.9 32 ...C........A............... CATGAATTTTTTACAAAGTCTTTGCCGTTAAT 1732823 28 92.9 32 ...C........A............... AGCTTGAGCATTAGAAATAACTTTTTGGGCAA 1732763 28 92.9 33 ...C........A............... AATTGAAGCATCTGAAAAGTGGCGCATGTATAT 1732702 28 96.4 32 ...C........................ ATCCAAGTTCTTGAAAAACAGTCAGATCAGCT 1732642 28 100.0 32 ............................ AACTCAGAAAGACCACTATTAGTATTGCCAAC 1732582 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 122 28 98.7 32 GTTTACTGCCATGTAGGCAGCTTAGAAA # Left flank : TGGAGATAAGAAAGTGGTTAGAATATTTTGAAGATTATGTGCATCTCACTTCTATTCGTGAAGTACCTAGCGACATTAAAGGCTATGCCATTTACAAGCGTAAGCAAGTGAAAACCAATGTCCAGCGTTTGGCACGGCATCGTATTAAACGTGGAGATATTGGTTTTGAAGAAGCATTAGCACGATATAGCAATGTGGTGACAACTACTGATTTACCCTATATCGAAATGCAGAGCTTAAGCAGCTCAGATGAGCAAAGCAAAAAACGTTTTAAATTGTTTATTGAAAAACTTCCCGCTAAAGAATCTGAAACTCAGGTTTTTAGCACTTATGGTTTAAGTTCGGAAAGTGCTGTACCTGAATTTTAACCCAATATTTTTTTGATTCTTTAACAGCTTAATAAAATCAATGAGTTATGATAGTGAGTTAAAACTTGGGTCTTTTATAGGTTTTGGGCTTTAACTTACTGTTATAACTTTATTTTTTGTTTTAAAATTACT # Right flank : CACCCAAAATAAAACCGGAGCATCGCCCCGGTTTTATTCTTCATCTATTTATTCTTCTAACAGACTTCTTAACATCCAGGCGGTTTTTTCATGGACTTCCAATCGTTGGGTCAGTACATCCGCAGTTGGCTGGTCATTGGCTTCTTCCACCACATCAAAAATACTGCGCGCGGTACGTGCAACTGATTCATGGGCACGAACCAATAACTCCACCATTTCATTGGCTTTTGGCACACCTTCGACTTCTTCAATCGATGCCAGTTTTACAAATTCTTTATAGGTACCCGGTGCTGGAAAACCCAGCGCACGAATCCGCTCGGCAATAACATCCAGCGCATTCCATTGCTCGGTATATTGGGTCATAAACATGGTGTGCAGGCTGTTAAACTGCGGTCCGGTCACGTTCCAGTGGAAATTATGGGTCATTAAATACAGGGTATAACTGTCGGCCAGAAGTCGGGAAAGTCCTTCGACAATTTTGGCCCGGTTATCTTCAGAAA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //