Array 1 73265-72767 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDFP01000003.1 Companilactobacillus halodurans strain TMW 1.2172 seq3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 73264 36 100.0 30 .................................... TAGAACTCTTGCAAGCAAGAAGAGGAAGAC 73198 36 100.0 30 .................................... CGAATTGTGGTATCTCACTAATCCATCTTT 73132 36 100.0 30 .................................... TTCAGTGTTCGATGACTGGTACAAAACTGC 73066 36 100.0 30 .................................... TGAACAAAATGCAGAAAACAAGTTAAGTTA 73000 36 100.0 30 .................................... TAACAAGAAAATTCTGGAACGTTAAAACAT 72934 36 100.0 30 .................................... CTTAGATTTGAAGAGATAAGCGGATTAACT 72868 36 100.0 30 .................................... TTGAGTACAATTTACCTGCTTGATAGCGCT 72802 36 88.9 0 ...................C.............CTA | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 98.6 30 GTTTTAGAACTATGTCATTTTATTTACTTATGAACC # Left flank : CACAATGGCTATTTAACATTAATGGTTATTTTAATTTAACTATGTCATTTTATTTACTTGTGAACGAATACAGTGTATCTCATTTCCATATTTATATCAATATTTTAGAAGAAATTCTATGAACTAGTGAACTATTTAATCCAATCGTCTTATAAAGCTAATACCTTGATTATTTAAATTTTTAAATGGATCTTATTATGCAACCATACTATTTGCTATTAAACCTTGACGATATATTAGATATAGTAAATAATAAAAAATATAGATATTATCAAAAGATAAGATGGATATGATAAATTAACGGTGGAATTGTGCTTTATTTCGATTTCATAGATAATAATCTTTTCTTTTCAACATTACAGATGTTTACTGATAAATGATAAATCTAAATAGAACATAAAATCACGTGGAGGCTTTTGATTTAAGACTTATATCTTTAAAAATTATTTCTAATTATGATAGTGACAAGCCAATTATTAGAATTTGGTTAGAAAACAACG # Right flank : CTTTATGATAACAATTTTATCAAATTTAAGTTACAGCCCTCTTATCCCACCTATTAGAATCTTGCTTATTCTATTTTTCCTTTAATTTTAATAGAGTATTTTTTAGTAAAAATACTTAACATAAATATTTTATAGCATTTAATAAGTAACAATAAGAGAGAGCCTGCATTGAAATATATCAAAATGGATTCAGTAATCAAAAAAAGATTACTGAGTCCATTTTTTAATTTTTATCCAATTTGACTAATTCCATCTGCGTAATTTAAAGTAACGCCTGATTGAACATTGAAAATATAGACGTTAAAGCGAACCGAATTATCACCGATTGATTGAGCTTCCATTTGCACGCCGCGAGGCAACAATTCATTTCCTCTAAAGACTGGCGTGACACGATATCTGATGTAATGGGAACTACTTTTCTTCAAATAATAAGCAATATCCATTTCATGAGCTAACATTTCCGGACTATTCAATGAACGAGTTCCTGTCATCAAGTTTTT # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAACTATGTCATTTTATTTACTTATGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 94733-95230 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDFP01000007.1 Companilactobacillus halodurans strain TMW 1.2172 seq7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 94733 36 100.0 30 .................................... AAATATTTAAAACATAACAATCCTAGTTAG 94799 36 100.0 30 .................................... AACAAGCCCTTGTTTTCCCGAGCCCAGCGG 94865 36 100.0 30 .................................... ATTTAGTATTCCTACCACTTTGGATGCTTA 94931 36 100.0 30 .................................... TATACAAAAAATTTGAAAATTACTACGTAG 94997 36 100.0 30 .................................... ATCATCTAAGCCAGCTAAGAAGACTACTGA 95063 36 100.0 30 .................................... TTGATTCAATTGTTCGAGCTGTAGAGATAC 95129 36 100.0 30 .................................... TCAAAGTAATGTAGGCTGGCTCTTTATTGT 95195 36 88.9 0 ...............G...........T..AT.... | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 98.6 30 GTTTTTGTACCCTTAAAGATTTAGAAACGATAAAAC # Left flank : AGAATTTCAGTTGAAGAGTTTAAGCAAAACTTCTTGGGTAATCTTATATGATATAAGTGGTTTTGTGGCACCTGAAGATGAAGCCAACTTTATTCTGAGTCTTAAAAAATTAACTCTGAATTATGATTTAAAAATCATTTATTTAGGTAACAATCTTGAGAATGTTCCATTAACGTCAGGTGATTTAGAAAAAATAATTATTAGTGCTGATGAATTTCACCAGTTACTACCAAGTGACGAATTAAAAAAGTCAGTCAGTATGCATTATCCTAATAAATATGTGGTAACGGAAATGAACTTCGTAAATTCAATAAGACGAATTTCTCAATATATTGGCAATGATGAAATCAATTTTATTCCAAGTAAAGATTTGGTATTATTGAAGGTAGTAAATGAGATTTTGGGTTACGAGACGTCGCTTGATCCAGAAAAATATTTGCTATCTGATGCAGAGACCAAATTTTTGGAAAATTAATAATAATTCAATTTTTTGATTTGAG # Right flank : CTAAAACCCAGATCTAAATGATCTGGGTTTTTCCGTGCACAAACCATATAAACAAATCAATAAATAAAAACAAAAAAACTGTTATATTTTATTTTTAAAGAATTATAATGCAAATGAAGTGTAATTGTGGATGAGTTATGTTACAAAATATGGGAGGTGTTTTAATGAAAACAACAACGAAAATTTCATATGTCGTTTTAAAGTATGATGATCAAACAGATAATGTTTATACGAAAACATTGAATAATGCCAATCACGCTTATGAGCTACCTAAGTCGACTTTTGTCCAAAAAGAGGACTCAACTTTAGCTGATATCAGGAAATACGTTATTTCAAAGATGATTGATTTTAATGTGAAAATCGATGAAAAACATCTCTTTTTTCCTTTTATCAATGTTTATACTGAAAATCATGAACGTGTCTTTAATTACGTTGCTTTGATTTTTGAATCGAATAAGAATACTTTTTCTTCAATGAATTACGAGTCATGGCATCGAGTA # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACCCTTAAAGATTTAGAAACGATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //