Array 1 195520-193328 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRDE01000009.1 Butyricicoccus pullicaecorum isolate Butyricicoccus pullicaecorum_25.3(T), whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 195519 33 100.0 35 ................................. GAGGAGGTGGGCCGGAATGGCCGAATGGAAAAGCC 195451 33 100.0 33 ................................. TTAAGTGTCCGCAGGTGCGCGGCCCGCTGGCCG 195385 33 100.0 33 ................................. TGACCTGCTGCCTGTGGTGGATCGCGCGCTGTA 195319 33 100.0 35 ................................. AATTCAAATGGCACACACCAGAAGCATACCGTCTA 195251 33 100.0 34 ................................. CCGGTCGGCACGACCAAGGCAGAAATGGTCGCAC 195184 33 100.0 36 ................................. AGCATACGCGCTGTCTCAGATGGGATACGAGGCAAA 195115 33 100.0 33 ................................. TCTGCTATCATCTTCCCTAGAAATTAGCACCCT 195049 33 100.0 34 ................................. TCATGCGGGCGTAGCTCAGATGGCAAGAGCACTG 194982 33 100.0 35 ................................. GGTGGAAGAGGCACTGGACGAGAATATCGTCATCC 194914 33 100.0 35 ................................. TTTAGACCATTTTAGATACATGTAATAGCTATGTT 194846 33 100.0 33 ................................. GGTTTTACCCGACCGACGTTGCATTTGCAGAGG 194780 33 100.0 35 ................................. ATCTGCTTACGATACCGCGCAAATGTCACGGTTGA 194712 33 100.0 33 ................................. CTGCTGTTCCCTGTATTCTTGGTACGCCTGAGA 194646 33 100.0 34 ................................. GGTGAATACGGATGGGTAAAGCTCACGGAAGAAG 194579 33 100.0 35 ................................. ATCACCCCCGATGTCCGGCATCATAATAACGCCGC 194511 33 100.0 33 ................................. ACGAACGAATTCGCAGTAAAACGATTAGCAATC 194445 33 100.0 37 ................................. TAGTATAGCAGAAAGAGGAAAAATGGACAAGAACCCG 194375 33 100.0 34 ................................. GTCCACAACGGTCAGCGTTGCACCGTCAGTCAAC 194308 33 100.0 35 ................................. ATAGCCACCATTCGACTGCGGCTGGTTAGAGTCAG 194240 33 100.0 32 ................................. GATACCTTGTACAGCGGCACGCCATACGCCGC 194175 33 100.0 34 ................................. CATGTTGTAGCCTCCTCATATTGGCCCAGCTATG 194108 33 100.0 35 ................................. AGAGGATGAATTCAACGAGAAACTAGAAGCGTGCT 194040 33 100.0 37 ................................. ACGAACTTCGGCGCCTCGGTGGACTCAACAAAACGAA 193970 33 100.0 34 ................................. GCGCATGGTCTTGGCGCTGTGGCAGGTGTGACAT 193903 33 100.0 34 ................................. TGAAAGTTGTATTTTGTTTGTGTCGCAACTACAT 193836 33 100.0 35 ................................. TGCAAGGTTTGTGTGTTGAGCCTGATTTGGATAGG 193768 33 100.0 35 ................................. TCGATAAAGAAAACTTTATCGTGCAGTTTGCACGG 193700 33 100.0 35 ................................. CTGTACGATTACCAGATCAAGGGATTTTTCAAGGA 193632 33 100.0 35 ................................. GGTGTAATGTCTGCGAGTCCGCGATGGAACTGAAA 193564 33 100.0 35 ................................. TTGACCGTGTTCGGTGCTACGTTGTTAGCCTTACC 193496 33 100.0 36 ................................. CTGCGCCCTTGTCCTGACTGTCTGCACCGTCGCCAG 193427 33 100.0 34 ................................. GCAGATAACCGGCAGGATTTGGGTCAAAATCTGC 193360 33 93.9 0 ............................A...A | ========== ====== ====== ====== ================================= ===================================== ================== 33 33 99.8 34 GTCGCTCCCCGCATGGGGAGTGTGGATTGAAAT # Left flank : CATATCCGCCATTTTTGTGGAAGTGAGCAAAAAATGTTAGTACTGATTACATACGATGTGAATACGGAGGATGCTGCCGGAAGAAAGCGATTGCGGCAGATTGCCAAACAATGTGTCAATTATGGGCAGCGGGTGCAGTGTTCGGTTTTTGAGTGCCTGCTGGATGCCGCCCAATGTAAAATGCTGCAAGCAAAACTCTGTGCGATCATGGACCCGGAAAAGGATAGTTTACGGTTTTATTATTTGGGTAATCGATATGATCGAAAGATCGAACATTTTGGCTGCAAACCCACTTACCAGCCTGAGGGACCATTACTGTTGTAAAAGGTGCGAACGTTAAGCGATCAGAAAATCCTTGAGAGGTTCGCACCGCAAAATCGCAGCTATATCTTAAAATCATAACGCGAACAAGGGGGACGATACATCAAATATTGATTATAGATCCTCGTGATCTGGATAAATCATACAAATTTACAAATATAGTTTTAGCTATATTTGCT # Right flank : TGAGTATGGTCATCTTCAGTTATATATGACGCGTACTCCATCAAGAAATAAAAGCATAGTTGCAGAATGTGGGGAGAAGTATGGGAAAACAGGTGCAGAACAAATCCAGCGGTGAGGTTTTGCCGAAGAAGGGCGCAAATGCCCGCACACCGTATGAGCATCAGTGTACAGCGATGCATAATCTTGATCTAATCGATCGGGAAAAGAATTACAGCACCCTGATCGTGCTGCCGACCGGTGGCGGCAAGACCTATACAGCTGCGCTTTGGCTGCTCAAAAATGCCATTGATCGAAAGAAAAAGATTTTGTGGATTGCTCACAGGCAGATGTTACTGGATCAGGCTGCGCAGTCTTTCCAGCAATACGCCTATGCGGAGACCATGCCGCATATTTCTTCTTTCCATTATCGGATTATCTCAGGTGCGACCGAACATGATCGAGCAATCGATATTACACCGGAAGATGATCTGCTGATCGTCGGTAAGGATAGCATTGGACGC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGCATGGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.40,-8.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //