Array 1 936737-937893 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP008813.1 Streptococcus agalactiae strain C001 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 936737 36 100.0 30 .................................... ATCACCGTATGAAATCCATTCACCGTGATG 936803 36 100.0 30 .................................... ATCACCGTATGAAATCCATTCACCGTGATG 936869 36 100.0 30 .................................... TGTCAATTTTCGTGTAAAGGAGGTAACTTT 936935 36 100.0 30 .................................... AAAACGATTATGTTTGTGCTATGTGCGGCG 937001 36 100.0 30 .................................... ATCACCGTATGAAATCCATTCACCGTGATG 937067 36 100.0 30 .................................... ATCACCGTATGAAATCCATTCACCGTGATG 937133 36 100.0 30 .................................... AACAAAATTGAATATAGGGATTTAAATGGT 937199 36 100.0 30 .................................... ATTTATCATCACTAAATATTTATCTCCACT 937265 36 100.0 30 .................................... ACATTTAACAGGTAGTTAATATCCTCATCG 937331 36 100.0 30 .................................... TAAAAAATACCAACTATCAAAAGTGATAGT 937397 36 100.0 30 .................................... CGTAGTAGTTATTCCAATTCTCTATATGTA 937463 36 100.0 30 .................................... AAACCACTTGATGCTGTATCTCTCATAAAA 937529 36 100.0 30 .................................... ATTGTGATACAGATAGTTTATACCTAAAAA 937595 36 100.0 30 .................................... TGGTTTAATACTGTAAATTGTTCAATATCA 937661 36 100.0 29 .................................... CCCTCAATTTATTGACATTATTAATATAA 937726 36 100.0 30 .................................... AAAAAGAGCCAGAAACTCAATCAGAAGAAA 937792 36 100.0 30 .................................... TGGTGTTGGCTGTTCTGGGATGACTACGTT 937858 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 18 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CTTTAATATCGTCTATATAGATTCCTGGACGGTTTTAGAGCTGCGCGGTTATTATGCTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTAGCAAGCTAACGAAATCATCCCAGTTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATATAGAGTTGTGTCTATTAGTAGAAAATTCGAATTATTTTTCGGATTCAAAGAGAATGTGTCGATAGAAGAGATATGAAAGACTATAATTCCAACCTTATTGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTTGCAAGCTTACAAGGAAAGTAGTGGAGAACCTATCCATAATCAACTAACAGCTATGATGGATCTCACCTATTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //