Array 1 1494365-1494214 **** Predicted by CRISPRDetect 2.4 *** >NZ_WMKI02000002.1 Streptomyces sp. S-2 utg000002l_segment0_segment0_pilon, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1494364 29 100.0 32 ............................. CGGGACGCCCCGTGGTGAAGGTGCCCCTCGCC 1494303 29 100.0 32 ............................. GAGGACCCGCGACGTACGGTGCGGCTGTTCGT 1494242 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 100.0 32 GTTTTCCCCGCGCATGCGGGGGTGGTCCC # Left flank : CGACACCATCGAGAAGCAGGGGTTCACCATCGACAACCCCAACGCCACGGGCTCCTGCGCCTGCGGTGACTCCTTCAGCTGAGTCGCTTCGCCGAGAGGCGGTGCCCCACTTCGGTGGGGTGCCGCTTTTTTGCTGGCCGGGCCTCACTTGCCGGCCGGGCTCGGTGGCCTCAAGCGCCGGCCGGGCTGGTTCGGCCTCAAGCGCCGGCCGGGCTGGTTCGGCCTCAAGCGCCGGCCGGGCTGATGGGGGTCGTGTTCGGGGCGCGGGCCGTCGGCCTGTGCGGTCACAGATGGCCTCAATCGCCGGCCGGGCTTGAGTTTGGCTGGGCTTGGACGGTGGCCTCAACTGCCGGTGCGGTTGCTGGGGGTTCTGGGAGAGGATGAGCGAGGCTTCGGGTGTGACAGGGGAGGGTGTTTGCTGACATTCAACCTAATTGCGGCAATCTCGCAAGCTTGCAGAAATGGGCTGCACCGCTAGGCAAAGCCGCAGGTCATCGAGG # Right flank : ATGCGTGCGCAGCTCACCGCCGACTGCGTCGGGTGCTCTCCGCGTCTGCGGGGCCCAGGGAACCCAAGTCCCCGGCCTGCCCAGTGCCACCGGCGCGCGAGGCGCCCCGATTCCGGCGGTGGCAGCCCAGTGTCAGCCCCCTCAGAACGCCAAGATCGTGACCGTGGCCGCGTAGATCACCACCAGTAGGGCCCCGTCGAAGCCCAGGCGGAACCAGCCGCGTTCCTGGCGGATGAGGAGGCCGCCGAGGACGACGGTGGTCATGACCAGGGCGGCGCTGGTGAGGAAGAGTTCGTCGTTGCCGGCGGCGTGGTAGAGGGAGCCGCCGCGGTAGGCGAAGTCGCCGACGGCCAGGTTGAGGACGTCGAGGGAGTTGCCGCCGATGATGGCGGCGAAGGCGAGGGTGATGGCGCCGCGGCGGACGGCGGCGATCGAGGTGACCGCTTCCGGGAGGCCGTTGATGACGCCCAGGATCACCGCGCCGACGAAGCCCGCGCGCA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCGCATGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCATGCGGGGGTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [25.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1985550-1985242 **** Predicted by CRISPRDetect 2.4 *** >NZ_WMKI02000002.1 Streptomyces sp. S-2 utg000002l_segment0_segment0_pilon, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================================ ================== 1985549 28 96.4 36 ...T........................ AGTCTTTGACCGGCACGGTCGAGACGGAGCCCGGCA 1985485 28 100.0 36 ............................ AATTGGTGACCGGTGCGGGCAAACCGGAGTTCCGCA 1985421 28 100.0 36 ............................ GATCGGTGACCTGTGCGGGCAAACCGGGGCCCGGCC 1985357 28 85.7 60 AA.G...............A........ AGTCGGGGAAAGGTGCGGGCGAACCGGGGCAGCCGGGAGGCATCCCTGCTGGGCCGGAGG 1985269 28 75.0 0 ..AGTG....A........AG....... | ========== ====== ====== ====== ============================ ============================================================ ================== 5 28 91.4 42 CCCAACAGCCCGGCCGGCGTTTGAGGCC # Left flank : CTGACCCGCCGTGACCCTGCGGGTCACTGACTGGCCTCAAGCGCCGGCCGGGCTGTCAGGTTCGCGGTTTCTCCGGTGCGTGGGTGGGGTGGGGCCGCGCCGGGGTACCTCCTCACAAACTGCAGGGTGCGGGGTGAGTTGGAGTATGGCTGCCTCGTGTGCAGTTTGCTGCGGGGGCACCCCGACACGTCCCCACCCCACGGTCTCGTACGCGGCTGACCGCCGGGGGGTGGATGAGGCCGTCACCGATACAGGGCCTCTCCCAGCAACCACCGTGAATGCTTTCGCTCGCCACAAAGATCCATCGGGGACGGCCTGTCTTTTCCCCTCCCACCGGCGGGACGACGCCGACGAGACGGGAGGGCGGGGTCGTGTCGGGGTGCCCCCGCAGCAAACTGCACACACGGCCGCCTTGAAGCGACTGACCCCGCACCCTGCAGTTTGTGAGGAGGTACCCCGGTGCGGCCCCGCCCGCCCCAACCGGCGAACGAACCGCGAAC # Right flank : CGGCGTAGGGTGCCGGACATGGCGCCCCCCGCCCCGGAATGGGACCTCCGCAAACTGAGAATCCTGCGTGCCCTGCACCAGCACGGCACGGTCACGGCAACAGCCGAAGCCCTGCTGATGGCCCCGTCGGCGGTCTCCCAGCAACTGTCGAACTTCGCCCGCCAACTGGGCGTCCCCCTGCTGGAGGCACACGGCCGCCGCGTCCGCCTCACGGACGCCGCTCACCTGGTCCTGCACCACGCCGACGAGGTCTTCGCCCAGTTGGAGCGGGCCGACGCCGACCTGGCGGCCCTGGTCCGGGGCGACGCGGGCCAGGTCCGGATCGGGGCGTTCTCGACGGCGGTGGCCGCCCTGGTCGTCCCCCTGGTGACACGGCTGCGCGAGGAGGCCCCCGGCCTGGAGCTGCGCGTCCGCGAGGCCGAGGCCGGGGAGGCGTACGACCTGCTGGCCGCCGGCGAGGTCGACCTCGCCCTGTCCCTGGCGGCCCACGCCCCGACCGT # Questionable array : NO Score: 2.64 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCAACAGCCCGGCCGGCGTTTGAGGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.80,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [25.0-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 3 2429783-2430055 **** Predicted by CRISPRDetect 2.4 *** >NZ_WMKI02000002.1 Streptomyces sp. S-2 utg000002l_segment0_segment0_pilon, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2429783 29 93.1 32 .............GT.............. CCGAGCGGCGCCCTGCAGAACCCGCTCTTCTG 2429844 29 100.0 32 ............................. ATCTACGGGATCGCGGCCGAACGGGACCGGAC 2429905 29 100.0 32 ............................. TGGGTGGCGTCGATCTCCATGAGCACTTCGGC 2429966 29 96.6 32 .........................T... GAGGCCGCTCCGGTCGTCACGAACATCATCGA 2430027 29 86.2 0 ..............G......CAA..... | ========== ====== ====== ====== ============================= ================================ ================== 5 29 95.2 32 GTGGTCCCCGCGCACGCGGGGGTGGCCCC # Left flank : GCAAGCCCACACCGCGCCGCCCGCTACGCCACCGGCAAAGTCCGATACCAGGCGAACTGCTCGTGAGTGGGCATCCAGTGCTGGCCGCACCGGGAGCAGTACCAGCGCCAGTTGTCGGGGTCGTTGCGGAGGTACGTCGTGTCCTTCCAGAGCCGACCGTGGATGTCCGTGTGGCAGGCCCGGTCAGGACAGGGCGGGGGAACGGGCGTGGTGCGCGGGCGAGTTGTGGTCAGCATGGGCGCCTCCGTGACTCGATGGGGTCAGGAGGGTGAAACGAGGGGGCTCGGGGCTGGGTGCGGGGGCGGGGCGAGGTGCGTTCGTTCGCGTGATGAATGGGGGATGAGGTGCGTGGGGGGCCGGGGTCTGCTCCGTCGCCTCGGTCCGCTGCGTAGGATCTAGCGAGGGCTCAAGGCTAGGTGGGCATTTTGGGGCGAATGTCGCTATCGGTGGAGCTTGCGGAAACTGGGGCAGGGGCGCCGTAAACCTGCTGGTCAGGGAGA # Right flank : CACCCCGCCTCACCCCGACCCGGCGCCCAGCGCCGCCACCCGCCTTGCTCCCCCCACCCCCACCTCCTACCATGAATGCGCTTTCACAACGCGTGAGGCGGGTCGGTGGGCTCGGGTTCTGGATGGTCGGAGCGGGCGGGACGGGATGAGGGTAGGGGCGCGTGGGTGACGGGGTGGCGGGGACGCCGACGGTGTATGACGTGGCCGGGCGGGCAGGGGTGTCGATCGCGACCGTGTCGCGGGTGTACCGGAGTCCGGAGTCGGTGCGGGAGGCCACGCGGGAGAAGGTGCTCGTGGCCGCGCGGGAGCTGGGGTACGTGCCCAGTGGGAGTGCGCGCGGGCTGGCGAGCCGGTCGACGGGGGTGCTGGGGCTCTGCTTCCCCGACTACTCCGACCCGGACGCCGAGAGCGAGGCGGCCACGGTGGACGCCGACGACGACCACGCCTTCATGCTCTACTCCGACCAGATCATCCGGGGTATGGAGCGGGCCGCGCGACGG # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [36.7-16.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 2743581-2743791 **** Predicted by CRISPRDetect 2.4 *** >NZ_WMKI02000001.1 Streptomyces sp. S-2 utg000001l_segment0_segment0_pilon, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2743581 28 96.4 33 ............C............... CGACCGCGCCTGGGCGGCCGGGGCGATCCTGGT 2743642 28 100.0 33 ............................ CAGGTTGAACCGGGCGGTCTCCGGAGAGACCTC 2743703 28 100.0 33 ............................ CCCGGAGCAGTGCGCGAGGAGCGCGGCGGCTTC 2743764 28 92.9 0 ...........A..........C..... | ========== ====== ====== ====== ============================ ================================= ================== 4 28 97.3 33 CTGCTCCCCGCGAGTGCGGGGGTGAGCC # Left flank : GGGGGCCACGAGCAAGGCTCAGGCTCACAGGGCCGGGCCGCTGGATGAAGCATCGGCTGTGACGGGGCCGCGCTCCGGGTTGCTTTGTGGAGGTGGCGACTCGGCTGCCACGAACTCTCTGTCCCGGCTAGCTTCTTCATGGGCGGTGCTTGGGGGCAGCTGGGGGAGGGCCCTGCTGTCAGCGGGCTTGGCCTGTCGGGTGCTCTTCTCGACTCCGCTCGACTCCGCTTCGGGGTTGGCTGGGCAGATCGCCTTTGCGGAGACGGGTCGCGCGGCCACGATCGGGACCATCCCCAGCGCCCAAGGTAGGCAGGCTCAGGCAGTGGCGCCGGGGCTTGGTGCTTCTACCGGCCGATGACCGGGATGGCTATGCATGCAGTGCTCTGCGGCGAAAGCAAGGCGGCGGGGGAGGGATGCGGGCGGCGGAGGCTAGGGTGGCGGACATGGCGAAGTTGGCGTGGAACGGCGACTTGCCGAGGTGAAGATGCAGGTCAGGGAGA # Right flank : CTCCCGGGCTGCAACGCACTGGCCATGAGGAGCCCGCGCCCTTGAGCCCCGCAGAGCCATGGTCGTATCCCTGCGATGAGAAGGAGCCGCATCCTCGACCGACCTAAGCGTCCATCGGGTAGGAAGAGGCGAACTGGGCGCCACCGGAGAGGACTTCTGCAAAACGTGTCGGGGGCCTTCACTCCACAGCGCCCCTGCTCACCGACCGTATGCCCAAGGCGCACGACGTGGCCCGCCCACGAGCCCGTCAGGCTGTCCTCGGCCCCCCGCGCGCCCCAGTCAGGAGCGCCCACCCACCGCTGGCCCCGCCCCCGCCTCCCCGGCAAGCGGTCACGCAACCCCCGCAAACGCCTCTGCCACGTGCTCGCGGCAGGCAGCACCCCCGCACCCGGAAGCTCCCCTGCCCGGTCCTGCCAAGCCGGGAGCATGCCCCCGAGGCGAGCCCAGGCAAGCCCAGGCGAGGCCCACCGGCCGCCCCTCTCGCCCCGCCACAAGGAACG # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGAGTGCGGGGGTGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGTGCGGGGATGAGCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //