Array 1 185557-188698 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP017470.1 Thermotomaculum hydrothermale strain AC55 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 185557 30 100.0 35 .............................. AACTTCATTTTGGTTGAATTCATATTCCCCCCTTA 185622 30 100.0 36 .............................. AGGTTTTTAAGGATTCTAAGAACAGGTATTTGCTTC 185688 30 100.0 35 .............................. AAAAAAGAAATAGAAAAAAAACTAAACAGCAGGAA 185753 30 100.0 35 .............................. TTTGTCTCAACTCTAAAAACACCGTCTAATGTCGG 185818 30 100.0 36 .............................. ATGGATAATTGTGTTTTTGTTGAAAATTTTGGTGCG 185884 30 100.0 36 .............................. ACACAAGTTCCGTCAACTTCTCAAACTGTAAGGGAC 185950 30 100.0 36 .............................. ATGGTCAACTTTTTCATTTTCCCCTCCGTCCAAGAT 186016 30 100.0 37 .............................. ACTTCTATAAACCACACATCACCCCACCTAACAACCT 186083 30 100.0 36 .............................. ATTGGTAGAACCCACTCTATACCCCCACTCTTTTTA 186149 30 100.0 38 .............................. CATCAAATTTAGTTCCATCACTTAAAAATTGCCCCTCG 186217 30 100.0 37 .............................. AGATAAAAGAGTGTAGGGCTTGCCCACTGCACTATCC 186284 30 100.0 35 .............................. AAAAAAGAGGTTGATTACAAGGTTTTTGTGGTTAA 186349 30 100.0 35 .............................. TGTCCTCGCTGTAAGAATAAGAAGGCTTTGTAAAA 186414 30 100.0 37 .............................. ACTCCTCTTAAAGTAGAGTTTCTTTTTTCCTATTTGC 186481 30 100.0 36 .............................. TGGAATAAAAAGCGAAGCAACAATGAAACGAGCCAC 186547 30 100.0 35 .............................. TTGTTATATTTGCCCCATCAGTTTCCCCAGCGGGG 186612 30 100.0 36 .............................. TAACACAACCCACGAGATTTTTATCGCCGATTTAAC 186678 30 100.0 38 .............................. TCTATATAATTATATATACGGTGGTTATGTGTATAACT 186746 30 100.0 39 .............................. GAATTAAAAGGCAATTACTTCGGGAAATTCTCTTTAACA 186815 30 100.0 36 .............................. ACAATCCCCGTTGCCTCAGGTGTAAAGATTTTCGCA 186881 30 100.0 37 .............................. TCAGCACCGGAAGGAACAAATTACATAAGAGTGTGGA 186948 30 100.0 36 .............................. ATCATAATTCCCCCTTTGCTAATATTTCTAAACCTT 187014 30 100.0 36 .............................. AAGGCTCTTTCTCTCTGTTCCGCATCTTGCGGGTCA 187080 30 100.0 37 .............................. GGGGTTGAGCCTGTCTTAATAAATTCTGCATTAGTTT 187147 30 100.0 36 .............................. TTTGAATGCGTATGCAATTCGGTATGATCATAAGTC 187213 30 100.0 36 .............................. ACCCACCTGTCAGGGTCGCTTGCTCCATCGTCCAGC 187279 30 100.0 37 .............................. ATCTCCTCCGTCCACCTTCTCCTTTCGCCCCGCTCCT 187346 30 100.0 35 .............................. CATAAAAGCACCTGACAAAATAGCGGTTGCACAGG 187411 30 100.0 36 .............................. ATCTCCTCCGTCCACCTTCTCCTTTCGCCCCGCTCC 187477 30 100.0 37 .............................. TAAAATCATTAAATCTTAATTTCAAATCAATTTCAGA 187544 30 96.7 37 .............T................ CTGCAACATATAATAAGGTTTGTGCAAGAGATTATTT 187611 30 100.0 35 .............................. TATAAGAGTGTGGATTGTTGGGATTGCAATATACG 187676 30 100.0 36 .............................. ATTAGAGAAACACCGTTCCAAAAACCAGATAAAGGA 187742 30 100.0 36 .............................. ATAATCAAAGGCAAAGCAAATGCCGGGCTTATGCAG 187808 30 100.0 37 .............................. TCAATGGGGATAGTGTTTTCATTGGCTATTGCTTTTC 187875 30 100.0 36 .............................. TATTGCAGCCTGACCGGAACACCAACCCAGGGAAAC 187941 30 100.0 37 .............................. TATACCGTGCTTTTAATATAACACACAGGGACAATCC 188008 30 100.0 37 .............................. TCGGAAGTCTTTGAAATTTCTTTCAAATCCTTTTGCA 188075 30 100.0 35 .............................. TTTGCACTCTGAACATTTCCAAATCGTCAAGGCGT 188140 30 100.0 36 .............................. AATAATTATAGGCGATAGCAAGCCCACAACACCAGC 188206 30 100.0 37 .............................. TTATGATACAAGAAAATAATTCCCAAAACAAGAAAAA 188273 30 100.0 36 .............................. GCAAATCCAGATATGGACGAGGAAGTTTACAAAAAG 188339 30 100.0 36 .............................. CCACACAACGCCACAAATTTTTGCGTCCCCATTGGC 188405 30 100.0 35 .............................. TTTCTATATCTGTATCATCATATGGGGAAATCGAT 188470 30 100.0 36 .............................. CTGTATGGGATAATATTCCCTGAAGTAAACGGGAAC 188536 30 93.3 38 C........C.................... ACTTATTTTCCGCCCATTCAGGCAGTCCACCCAAAAGA 188604 30 93.3 35 C........C.................... AAAGCCTTCTGAAACTCTGTTTTTAGCCCTGTAAA 188669 30 90.0 0 .........C...............A...T | ========== ====== ====== ====== ============================== ======================================= ================== 48 30 99.4 36 ATTTCCACATTACCTACAAGGAATTGAAAC # Left flank : AAAAAAGGTTAGTTACAGAAGGTTAATCAGGCTTGAGTTATACAAAATTGAAAAACATCTAATGGGGGAAGAGGAATACATCCCCTTTATTATGGAGTGGTAATGTTTATAATTCTGTACTATGATGTAAACCAGAAAAGGTGCAACAAAATGCTAAAAGTTTGCAGGAAATACCTGCAATGGGTTCAAAATTCTGTTTTTGAAGGGGAAATAAGCAATGCGAATTATGAAAGGTTGGTACACGAAATTAAACAAATAATAAAAAAAGAGGAAGGGGATTCAGTTATTATTTACAGGTTTAAAATGATGTACTATTCAAAAAGAGAGGTGTTAGGAAACGATAAAAAGGAAGACATAACCTTTATTTAAATTCTGTCTATCGGTAATAGTGCAAAAAACACGGGGTATAGACAGAAAAATAATAATTTTTTTGAATGGTTCTTTGACAATTTTGTATAATGGTAAGGGAACGAAAATATTATGTATAACAAAAGTTGAGT # Right flank : TTTCTGTATTGCAAGCGCTAAATATTCCTAAAGTTCAAATTTTTACATTTTCCCCTATGAATTTGACATTGATGGCCTGGTTTAAGTAAAATTTTTCAACTATAGTATTTTTATTGGGGTAAATCCATTTTTTATGTTTTTTTGTTTTAAAAAAATTAGTCATTGGTTTTGAATTTTAGTTATTTTTTTTGTAATATTTAATGGTGAAATTTTATGCGGGGGTGTTGATGTTTAAAAGGGTTAAATTTGTACTTTTGTTTTTATTTTTTGTGGTTTGGTTAGTGCGGGGAATTTAAGTGATTTTTATGAAAAGGCAACTTTCCCAAAGCTTCAACAACTTAATATTAAAACAAAATCTTTTAAGGTTGCTGATTTAGTTGTAAGTGTTAAACCTGATAGCAAGATTTACCTTATGCTTGCAGATGATGAACCTGTTGGTATTGCTGTAAGCAATGCCAGTTACGATTATAAGTTTGGGGATAAGTTTTTTCTTCCCGTTG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCCACATTACCTACAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //