Array 1 103229-108849 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLJE01000076.1 Acinetobacter baumannii strain ABOB15 contig-59, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================== ================== 103229 30 93.3 31 ............................CA TAAAAGCTATTAAAACAACCAATGAAAAAAA 103290 30 96.7 30 ............................G. GAAAAAGCGCTTGCTATGGCTCCTATTCTT 103350 30 96.7 30 ............................A. GCGGTGTAATGTTAATGTTGGCGTTTTTAT 103410 30 93.3 30 ............................CA TGAATGAGTTTGCACCAGAATTGGCTTTAG 103470 30 93.3 30 ............................AC CAATTACTGAAATTAATACTGTTGCTGTAT 103530 30 96.7 30 .............................C AGTAGCTCCCCAATTGTAAGGAGTAACAGA 103590 30 100.0 30 .............................. ACAATTGGGGAGCTACTGAGGTAGGTGAAA 103650 30 100.0 30 .............................. ACGGATGCCTGTAACTGTCATAATCGGATG 103710 30 100.0 30 .............................. GAGACACTCAAAATTTATACAAGATTTAAT 103770 30 93.3 31 ............................AG CCGAGGCTGCAATGATCTTTGATTGGGATTT 103831 30 96.7 30 .............................A CTTCTAATTCATCACGGAATTTTTTTAATG 103891 30 93.3 30 ............................AA TTCATGAAAAGCCAAGCGATTATTAATAAT 103951 30 93.3 30 ............................AC CTTGAGCAATATTAACGATGTGATCTAACT 104011 30 100.0 30 .............................. TAAGCCTTCTTGAGCTATGGTTCGACTACC 104071 30 96.7 30 ............................G. CATCAAAATTTAGTTGTAGATCTTTAATTT 104131 30 93.3 30 ............................GA GCTAATTTCTGACTAGCGCTTGCAGCAAGT 104191 30 96.7 30 ............................A. AACCAAGTGCCTTATGAAGGCGGCATTAAG 104251 30 96.7 30 .............................C GTTTATCCCAGTTGTACACAAGTTGGGAAT 104311 30 93.3 30 ............................AA GTGAAATTCTTAGAGTCATTTGATTTAGAT 104371 30 96.7 30 ............................A. CCGCTGACATTTTCCACAGGGCACCACTTG 104431 30 96.7 30 ............................C. GAAAACTTTGATCCGTTCATCGGCCAAGAA 104491 30 96.7 30 .............................A CCTTTTCAATTAGGCTCACCAATGGTTTGA 104551 30 93.3 30 ............................AA ACACAGGCGAAGCAATTGGTTATGTGGCTT 104611 30 93.3 30 ............................GG TATGACATTGCACGTAAACGCTCACCACCA 104671 30 100.0 30 .............................. GCAAGTCTATTCATCCGGTTATGGTCATAG 104731 30 96.7 30 .............................A ACCCGTCGTGTTGATAAGAAACAAATCTGG 104791 30 93.3 30 ............................CA ACTAAGTTTTTTCAACTTGAATAATATTAT 104851 30 93.3 30 ............................AA GGAAAACGCATTAACCTAGCATATAAAATG 104911 30 93.3 30 ............................AA ATTTTCTAATTAATATTTCGGACTTATGCA 104971 30 96.7 30 ............................A. CAATTTGAAGCCCCTCGATGTCAGCAAAGA 105031 30 93.3 30 ............................AC AACTTGCCTTTAATTTCTTTGTCCCAAACC 105091 30 96.7 30 ............................A. CTGGAGAAGGTCGCATGAGTATTTATCAGA 105151 30 93.3 30 ............................AG TCTGGGCAAGCGGTTGTCCATTCTGGAAGC 105211 30 93.3 30 ............................AA TACGATCAAGTAGCTGAAGATAGTTATTTT 105271 30 96.7 30 .............................A ACAACTGTTCGCTATCAACGCGATGAGTCA 105331 30 96.7 30 .............................A TGTCATTGTATAAAATAAAGCCACCTCAGT 105391 30 93.3 30 ............................AG TAACTTCACCGTCTTGTGTGTCAACAACAG 105451 30 93.3 30 ............................AC CTGTACCAGTCGTAACACGGGTATGACCTA 105511 30 96.7 30 ............................C. ATATTGATGTATTATGTTCTCTATGCTGGA 105571 30 96.7 30 .............................G GAGCAGATGATACTGCAATTGATGTGATTA 105631 30 100.0 30 .............................. AGATCGTTGAATTGAGGATGCTTGATCAAG 105691 30 93.3 30 ............................GC ATACATTGCAGCAGCTTTGGTTTTTTTCTT 105751 30 93.3 31 ............................AA TGTCATATTTTGCCAATCATGAAAGTTTTTT 105812 30 93.3 30 ..................T.........A. TCCCAAAAATCATTGCAACTGAGTTAAAAA 105872 30 96.7 30 .............................A TCGAAAAGTGAGAAGAAGAATGGAAAACCA 105932 30 93.3 31 ............................CA AAATTCATCGAAAACATATACAAATGGATGA 105993 30 100.0 30 .............................. CATGGTTCGCAATCTTTACATGTGTTCTTA 106053 30 93.3 30 ............................AC CTTTCTGATTTGAAGCAACTAATTTTTTCA 106113 30 93.3 30 ............................CA AGAAGAAAAGAAACGCCGTTTGCTGGGTCT 106173 30 93.3 30 ............................CC TTACGGCGAATGCATAAACGATCTTTTAGA 106233 30 96.7 30 .............................G GCTCGGGGAAAACTTTGTGGGCTGTAAAAG 106293 30 96.7 30 ............................C. GAAAAAGAGCCACTGGCCACGCTAAAAAGC 106353 30 96.7 30 .............................G CATAGATTCTGCCGATCTTTGTTTGATTTG 106413 30 93.3 30 ............................AC AGGAATATCATTACCGGTCCCTGAGTGGTC 106473 30 96.7 30 .............................A AGCTTAAATTAATTGGTATTTTACCGAATC 106533 30 96.7 30 ............................A. AGTCAGACGCAACTGCAACAGTAGGTAAAG 106593 30 96.7 30 ............................G. GTTAAAAGAAAATAATTGCCCCTTAATTCC 106653 30 93.3 30 ............................AG TTAGGCCCTAGCTTTTGAGTCACACTTTCG 106713 30 100.0 30 .............................. GCAAATGAAGGGCCAACAGTCTCAAGAGCT 106773 30 93.3 31 ............................CA TCCAAAGGAAGCTTGCGGTTGACTAAGCAAT 106834 30 96.7 30 ............................A. TAAGAAAGTGATCGAGACGTTTCTTTAAAT 106894 30 100.0 30 .............................. CCCACCCGGATATATAGCATACATATAACC 106954 30 96.7 30 ............................C. CAATTTTACTTTCCTCTTGATAATGATACT 107014 30 100.0 30 .............................. TTGTCTGAGTCTTGGCCGTTTCTAGTTCAT 107074 30 100.0 30 .............................. TAACAGCTACACCACCTGTTTTAATAGCAT 107134 30 93.3 30 ............................AA ATGGCGGGTATCGGCGCTGTAACTGGCAAA 107194 30 93.3 30 ............................CG CTTAAGACAAGAGAAACAATACCCATCAAA 107254 30 93.3 30 ............................GA AGCTTCTAATGTGCATAATGTCTTTTTCGT 107314 30 93.3 30 ............................AG TATTGCGGCGAAGTGTGCGGAAAATGCTAT 107374 30 100.0 30 .............................. TAATTGTAATTTTAATTATGTTCCAAGGGA 107434 30 100.0 30 .............................. TAACAATTGAATTTCAGGTCATTCTCAATG 107494 30 96.7 30 ............................A. ACTGGATTAGCAACAGCTAAGTCATAAACT 107554 30 96.7 30 ............................C. AAGAATTTTAAAATGAAAGGTCACGGTTGG 107614 30 96.7 30 .............................G TGAAAAATCAAATTTTGCACCTTCAGACTT 107674 30 90.0 30 ...........T.C...............C TGGTTGGCCGATTCCTGTTTATTTTGAACC 107734 30 93.3 30 ...........T.C................ CCGCAACTTCAAAACAACCGCCATTCATAT 107794 30 90.0 30 ...........T.C...............G TAGCTACGAAGTTGACACGAAAAGTCACAG 107854 30 86.7 30 ...........T.C....G.........A. TGCCTTTCTTGTCTGTTACTACTGCAAAAA 107914 30 86.7 30 ...........T.C..............AG CCATCAGAACGATAGATGTAAGACTTGTCA 107974 30 90.0 31 ...........T.C...............G TATAACCACCGTCTGCAAATCCTTGTGGCGT 108035 30 86.7 30 ...........T.C..............AA TAAGCTTTTATTCTTGACCGAGTTAAAAAG 108095 30 93.3 30 ...........T.C................ AACTTTGAAAATGTAAAAGTTGATTTTAGA 108155 30 96.7 30 .............................G CAGTAGAAAATGAAACTGCCATCGATGTGG 108215 30 93.3 30 ............................AA ACTTTTCCTTTGCCATGACTAGTGCCATGA 108275 30 96.7 30 ............................G. GAATATGCGTCAACTTGGTAAGTTAGATGA 108335 30 93.3 30 ............................AC CTTCGGCACCGAGAGGGACAAGCGTCGGAA 108395 30 90.0 30 ........A...................AA ATTTGCTCAAAAGGTGTGTACTTTCCAGAA 108455 30 93.3 30 ............................CC GACAAGACGATCCACAACGCAAGAGCCACA 108515 30 96.7 30 .............................G TTTGAAAACTCGATTGTTTTGCCTTTGTCG 108575 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 108635 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 108695 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 108755 30 80.0 35 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGATGTGAT 108820 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =================================== ================== 94 30 94.6 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCTCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATT # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTCGAACAGATCAAACAGTTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAGAGCGATGGTGAAATCACTGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTCGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.16, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //