Array 1 1881-1297 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_BAKJ01000126.1 Bacteroides rodentium JCM 16496, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                                	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	===============================================	==============================	==================
      1880	    47	 100.0	    29	...............................................	CTCCAAGAGTCCTCAATAGCTTGAATACA 	
      1804	    47	 100.0	    30	...............................................	AAATTTACGTGGAGATTAAGAACGAAGGTG	
      1727	    47	 100.0	    30	...............................................	ACGTTGTATTTTTCCTTAACCACGTGCAGT	
      1650	    47	 100.0	    30	...............................................	TCAAGACCACACCCGCCCAATTATCCTTCT	
      1573	    47	 100.0	    30	...............................................	CTATTGAAGCATCTACAATCTTTTCATACT	
      1496	    47	 100.0	    30	...............................................	ATTTATGTGCGCTTATCTTCAGCTTACGTA	
      1419	    47	  97.9	    29	..........................A....................	ACTAATTTACAATACTCACAAGAATTAAG 	
      1343	    47	 100.0	     0	...............................................	|                             	
==========	======	======	======	===============================================	==============================	==================
         8	    47	  99.7	    30	GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC	                              	       

# Left flank :   GACTTTAGGAATCCACACACAGACACGCACACACA
# Right flank :  TGATTACAAGTAGCAATCTAATATTCAAACAATTACACATAGTATTAGAATCTAAAAAAAGAATGCTGGTTCTGAAAAAATCCCGCCATTGCGCGGGATTTTTTTAGAATAATTCTAATTGTTGTCCAGGCGTATTCACATCCACAGTCTTTTTCCCATAAAAAAGTGCTATATTTCCAAATTGCTTGTCCGTAATGCACATAATTCCGACACTTCCATAATCCGGTAAGAAAGATTTAACTCTTTTTATATGTACCTCCGCATTCTCACAACTCGCACAATGACGAACATATATAGAGAACTGGAACATCGTAAATCCATCCTTTTGCAGATTTTTTCTAAATTCCGCATACGCCTTTTTATCCTTCTTGGTTTCGGTAGGCAAATCAAACAACACTAATACCCACATAATGCGATATTCACTAAACCGGTCCATCACATCTCTGGATAGGATATTTTACGCAACTCACCACTGAAACATTTATACAGAGAAGCCGTAG

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:65.96%AT]
# 	Reference repeat match prediction:         R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-1.00,-1.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [78.3-30.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,5.28   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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