Array 1 32492-31307 **** Predicted by CRISPRDetect 2.4 *** >NZ_UJQT01000040.1 Klebsiella pneumoniae strain EuSCAPE_BE030, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 32491 29 96.6 32 ............................C CGTTCAAGAATAACTTCGTAACGCTCCAGCCA 32430 29 100.0 32 ............................. GCGGTTCAGTATTTGACTCCGTAATTCGAGAT 32369 29 100.0 32 ............................. GCTGCGATCAAAAATCAGATAAGGCTGGTAAC 32308 29 100.0 32 ............................. TCTTCCTCTGAATGGTTCGAATGGATTGAGTA 32247 29 100.0 32 ............................. AACCCCGCACGGCGCGGGGTTCCTACTCTCGA 32186 29 96.6 32 .....................G....... CTGTCTTCAATAATATCAGCAGTTCGTCGGAC 32125 29 100.0 32 ............................. GCATGACGGCGGACGTCGAGATTATCAAAGCG 32064 29 100.0 32 ............................. CGTCTGGCGAGGTTTACGACGAGCTGACGTTC 32003 29 100.0 32 ............................. TCACGTTTGCAGAACTCGCGGAGGAAGAAGAA 31942 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 31881 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 31820 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 31759 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 31698 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 31637 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 31576 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 31515 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 31454 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 31393 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 31335 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 20 29 98.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 252-41 **** Predicted by CRISPRDetect 2.4 *** >NZ_UJQT01000475.1 Klebsiella pneumoniae strain EuSCAPE_BE030, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 251 28 100.0 33 ............................ TGCCTCCAATGCAATCACCGGCCTGCTAACCGG 190 28 100.0 33 ............................ CGTGTCGAAGCGCACCTCGTAGCCGAGCCAGTC 129 28 100.0 33 ............................ CGTCATCAGCGCCTTGTTCCAGCGGCGACCACC 68 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 4 28 100.0 33 GTCTTCCCCACACGCGTGGGGGTGTTTC # Left flank : G # Right flank : CTCCAGTCGTCGTAGTCCTCGGTAATGTCCTCGAGTCTTCC # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACACGCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACACCCGTGGGGGTGTTTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [30.0-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //