Array 1 202576-200168 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJHX01000004.1 Streptomyces avermitilis strain NBRC 14893 contig4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 202575 29 100.0 32 ............................. CGGCGGCAGCAGCAGCCGAGCGGGCCGTGAGC 202514 29 100.0 32 ............................. CGGTCCGTAACTGGCAGAAGCGTTGCTCGGTG 202453 29 100.0 32 ............................. CCTGTACTACGCAGGCTGGAATGCGGGCATCG 202392 29 100.0 32 ............................. GAGCTCCCGTGAATGCTACCGCTTTAGCACCT 202331 29 100.0 32 ............................. CGGACACCACCAACGTCCACGGCATCGCGAAC 202270 29 100.0 32 ............................. ACGGCCATCACCCTGATCTGGGTCACCGTCTC 202209 29 100.0 32 ............................. CTGAACATCTCCAACTGGCAGTCGCAGATCGA 202148 29 100.0 32 ............................. CTGGGCGATCTGCTGCTCTAGGTCCGGTACAG 202087 29 100.0 32 ............................. GTCCACCGGCAGGACCGTGCACGGGATGGATG 202026 29 100.0 32 ............................. TCGCTGCCCGCGTTGAGCTCGGCCGTCGTCGG 201965 29 100.0 32 ............................. CCACCGAAGCCCTTGGCGCTGGCCAGCTTGGC 201904 29 100.0 32 ............................. GCTTCGGCGTCGACACCTACCGCCTGTCGACC 201843 29 100.0 32 ............................. GCTTCAGGTCTCGGCCAGACCACACTGTCGGT 201782 29 100.0 32 ............................. CACTGTCCGAGCCCCTCGCGAGCTGAAGCGGG 201721 29 100.0 32 ............................. TCGTCACGGACCTTCTTTGCGTGGCGGCTGGC 201660 29 100.0 32 ............................. TCGATGAAATTGGTTCCGCCCGTTACCGAGAC 201599 29 100.0 32 ............................. GTCGACCCGCGAGGCTTCGGCATGGACTGGCT 201538 29 100.0 32 ............................. TCCCCGTTCTTGTCTAGCCAGCCCTCACTGTC 201477 29 100.0 32 ............................. ATCTGCGAGCCCTCGACGGAGCAGCGGCCCAT 201416 29 100.0 32 ............................. GTCGACCCGCGAGGCTTCGGCATGGACTGGCT 201355 29 100.0 32 ............................. TTGGCGGGCGGCTTCGGTGCGGAGGTCTTCGT 201294 29 100.0 32 ............................. CTCGCAGCTACACGGCGGGGCCCGAAACGGGA 201233 29 100.0 32 ............................. TCGAGGGCGGCCATGCGCTGGAGGTGCCAGGG 201172 29 100.0 32 ............................. TTCGGGTTCCGGCCGAGGCTCTGGTGCCAGTA 201111 29 100.0 32 ............................. ACGCACCAGCTTCTCGTGCGGCCGGACACCCC 201050 29 100.0 32 ............................. TGCAGGACGGCTTGCTCGACGAGGAAGCGGTC 200989 29 100.0 32 ............................. TGGGGCTCCGTCTCCAGGGACGACAACGGCCA 200928 29 100.0 32 ............................. CTCGCCGACGGCTTCGAGGTCTCGGTGCCGCA 200867 29 100.0 32 ............................. CCGGCGCGCTGGCGTTCCTGCAAGACGAGAAG 200806 29 100.0 32 ............................. ACGGAGCTGCGGGCAGAGCTGACAGCGACGAA 200745 29 100.0 32 ............................. TGGGTGATGCTCTCGTCGATGCCGAGGATGAG 200684 29 100.0 32 ............................. CCGTTCCCCTGGATCCAGCGCGGTGAGGTCCA 200623 29 100.0 32 ............................. ACGGTCGGCCAGCAGTTGCGGCGCGACCCGTT 200562 29 100.0 32 ............................. CCGAGGAAGCCGAAGGCGCCGACTTCGCCATG 200501 29 96.6 32 ..G.......................... GCCGTCACCACCACGAACCGGAAGCTCACTTC 200440 29 96.6 32 ..G.......................... TAGTCCCGCCTCCAGGCCCCGCCCTGAGCCGC 200379 29 93.1 32 ..G..............A........... TAGTGCGTGCCAGTCGACACCGAACTCAGGGT 200318 29 93.1 32 ..G......................A... CGCCGCGCCGTGGCTTCTTCGTTCGGCCGGCC 200257 29 86.2 32 ..G..........A......A..T..... TGCTTCCCGATCAGCGAGGGCGGGAAGCGGGC 200196 29 86.2 0 ..G................G...A.T... | ========== ====== ====== ====== ============================= ================================ ================== 40 29 98.8 32 GTTCTCTCCGCGCGAGCGGAGGTGGGTCG # Left flank : CCCGCGCATCGTCGGCGACATCCAGGAGCTCCTCGGCCTCGGCTCCGCCTACGACATCCCCGATCCGGAAGAACAGCTCGTCGATCTATGGGACCCCATTTCCGGACCAGTCCCCGGTGGCATGAACCACGGGACGGATACATGACCACACAGAAGAGGGAACACACTCAGTGGCCTCAATGATCGTGCTCTCCGCCACCGCCGTCCCCGACCACCTCCGCGGAGCACTCACACGCTGGTTGTTGGAAGCCACCCCAGAGCTGTACATCGGAACCGTGTCCGCCCGTGTCCGCGACGAATTATGGACTGCGGTCGCCGCATGCACTGGTGACGGCATGTCGGTCCTTGCCTACCCCAGCGACAACGAGCAAGGCTTCGAGCTCCGCACTGCAGGATCCCGCCGCCGCCACCCCGTCGAATTCGACGGCCTCACCCTGATCGCCTTCAATCGAGAAGATAAAGAAAAGGCAAACCCCCTGTAGAAACGCAGGTCAGGAAGG # Right flank : ATGGCCAAGGGCGCCGAAGAGATCCGCGGCAAGTCGTCCCCGCGCCCACAGGGGCAGCTCCGCCAGGGACGCCATCGGCCGGGCTGGCAGTCCTCATGCCGCTGCCTGGCGGTGTCCTCCACTCGAAGGTCATGCGCTCATCTGCCCAAGTTGCAAGGCAGTTGATGCCTCTAGTGGCGTCGGACATCGACGTAGCGACCTCGCTTACGCCGCGTCAACCGACACCCCGCCTGCGGCCGGCCGCAGGCGGACAGCGTGCAGTTCGCCCAAGCGCCAGCGAAGGAGGAACTCGACGGTACGGCGGCCCGCCGCGTCTGCAGCCTCTTCCGCACCGCGGCCGCGGTGCCGCAGGCACGCCTCATACGCGGCGTCGGCCTCGACCACCACATCCTCCGCCCCCAGCAGCCGGCGCAGCGCCGCCGCGCGCCGTTCGTCCCGGATCTGTTGCGCCACCTGCGGCGCGTAGAACGCGACCAGAGCCGGATCGGCGTCCGGACCGC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCTCCGCGCGAGCGGAGGTGGGTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGGGTCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 212268-215899 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJHX01000004.1 Streptomyces avermitilis strain NBRC 14893 contig4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================= ================== 212268 30 96.7 31 .............................A CACGGCTGTTGAGCCGGACGGCGCCGAGACC 212329 30 100.0 31 .............................. CCCGATCGAGGGCGGTGTGAGCATGAGTATC 212390 30 96.7 31 .............................A CGTCGTGGGACTGGTTGGCCGCCGCGTTGAA 212451 30 96.7 31 .............................C AGGTCGCCAGCCGCTGCCCGGTGTCGCAGTC 212512 30 96.7 31 .............................C CCCATGATGATTTGGCCAGGCACCCGAACCA 212573 30 93.3 31 ............................CC ACTAACTCAAGACGCAATGATCACAATCGGA 212634 30 100.0 31 .............................. CGATGATGCCGGCGTCGACGGCGATGGGGAA 212695 30 96.7 31 .............................T CGTTGAAGCTCATGCCGGTGCGCTTCTCCAG 212756 30 96.7 31 .............................C CGCCCGCGCCGCACTCATCCCCGACCAGGCG 212817 30 96.7 31 .............................C CCGTGAGCAGCCGACGTTCGGTGACCGGGGG 212878 30 96.7 31 .............................C CGTCGATGAGCGCCTAGCCTTGCTGGAACGA 212939 30 96.7 31 .............................T CCATGCAGCACCGCGGCGACCGCCACCCCCC 213000 30 96.7 31 .............................T TGGGGCAGTAGGTCAGCGAGGATGCCGAGCC 213061 30 100.0 31 .............................. AGAACTACGACGAGATGGCCAAGAAGACCGT 213122 30 96.7 31 .............................A ACGACACGGCCGCCTTCAGCCCGCCCCAGAC 213183 30 96.7 31 .............................C CGCCCGCACCACTGACGTGCGACGAGTGCGG 213244 30 100.0 31 .............................. CGCGCGGGTCCAACGTCCAGGTCGTCCTCAC 213305 30 96.7 31 .............................T CCACCACGCGCTCCAGGAAGCTGGTCCCCTC 213366 30 96.7 31 ............................T. GGTGTTCGTCGGCATCCCGGTGCTCGTCGTC 213427 30 96.7 31 .............................C TCGGCAAGTCCGGCGCCGACGCCCTCTACGA 213488 30 96.7 31 .............................C GCAGCGTCGGGTGCTGCCGCTTCATCAGGAC 213549 30 96.7 31 .............................C AAGCGCGGTGTACACGATGTGGGGGTGGATC 213610 30 100.0 31 .............................. TCCGCGCGGACCCGGGCGTCGGTGTCGACGC 213671 30 96.7 31 .............................C AGTTCGGCAGCCTCCTCGGCGACATCTTCGG 213732 30 96.7 31 .............................T GTGACGCCTGCCCCATCGCCAACGCGACGCC 213793 30 93.3 31 ............................TT CTTCGCCCCGGCCGTCCCCGCCGCCGCCTTC 213854 30 100.0 31 .............................. CCCGCACCTGCAGACGTACGTCCAGTCCAAC 213915 30 96.7 31 .............................T CCTGGGACGCCCTCAAGGTCCCGAACGTCTG 213976 30 100.0 31 .............................. TGGGGGAGGCTGCGGAGGCGCAGACCACGTT 214037 30 96.7 31 .............................T ACGCGTGGGGCGGCATCCTGGTGCGCACCTC 214098 30 100.0 31 .............................. CTGCCATCGAGTCATCCCCTGCGACCCCGGG 214159 30 96.7 31 ..T........................... TTTCGTACCCGAGGGCCGGGCCGATGATGGT 214220 30 100.0 31 .............................. ACATGATCGCAGCCCGATTCCTGCGGCAGGA 214281 30 96.7 31 .............................T CCACGGACGGCAACTGATCCCCGGCATGAAC 214342 30 100.0 31 .............................. TCAACCGCGCGTTCGGCCGCAGCCGGCTGGT 214403 30 96.7 31 .............................C CTGACCGGCTGGCGTTCCAGGCGACGTCGAC 214464 30 96.7 31 .............................T ACGCCATCGCCTGGCGTAACGCGCTCCTCAC 214525 30 96.7 31 .............................A CCGTCACGTTCGACACGCGGGTCGGGTTGTA 214586 30 93.3 31 ............T..A.............. ACATCCACGGCAACCCGCTGAAGCTGACCCG 214647 30 96.7 31 .............................A AAACCGGGCGCGCCGTGCAACCTGACGGCCC 214708 30 96.7 31 .............................A TCAGCAGCATCGCCAAGGCCATCGTGGCGGG 214769 30 100.0 31 .............................. AGCCGGAGGCCCGGCAGACCGCCGTCGCCGA 214830 30 96.7 33 .............................T CCGCCCGAAGAAGGACCGCAGTACCGCCCCGTA 214893 30 100.0 31 .............................. CCCTCAACAGGCCGTCAACCGAGCACGCCAA 214954 30 96.7 31 .............................A CGGACAAGGGCATCACCGTCCTTTTCACCTC 215015 30 100.0 31 .............................. AGACCCTTGCGAAGACCAGGCGTGCCAGTGC 215076 30 96.7 31 .............................T CGCGGTGCCGCCACAGCGACGGTCGGGCGCC 215137 30 93.3 31 ............T................C TGATGCTCGACATCGCGAAGGGCATGCAGGC 215198 30 100.0 31 .............................. CCGAGAACGAGCGGCTGAAGGCGGCGAAGCC 215259 30 100.0 31 .............................. CCATGGAGTAGCCCTGCTTGAAGGCGTCGTA 215320 30 96.7 31 .............................T CGGACACCGAGGTCAGCGCGTGGCTGCTGTC 215381 30 96.7 31 .............................C CACCGGGGACGTAGCCGACGTCCGCCGCCCC 215442 30 93.3 31 ............T................T CGGAGCTGGCCAGGGAGCTGACCACCCGGGT 215503 30 93.3 31 ..........T..................C TTCCAGGTCAGCGGGAACTGGCCAAGGCTGA 215564 30 90.0 31 ...........A.......T.........A AGCCGGAGACCGAGCAGCAGGACCAGCCTCA 215625 30 93.3 32 .............C...............T ACTGGATCTTCCCCGTCCGTGACGAGCACGGG 215687 30 93.3 31 ......C......................C CATGGTGATCTACCACAGCGAACTTGCGGGC 215748 30 100.0 31 .............................. TCCGCCTCGACGGTCTGCACCGGGCGAAGAT 215809 30 93.3 31 ...T.........................T ACCCGGTTCAGTGAAGGTCAGCTGGGGCCGT 215870 30 93.3 0 ......................C......A | ========== ====== ====== ====== ============================== ================================= ================== 60 30 96.9 31 GTGCTCTCCGCGCGAGCGGAGGTGAACCGG # Left flank : TCGTTCCGTACGGCCGCGAACGCCTCCGGAACCTGGGCCTGAAACGGAGGAGTGATCTTCCCCAGATCGTGCAACCCCGCCCAGAACGCCAGCACCCGCCGAGCCTCGGCCACCGTCAGCCCCAGCGCCCGTGCGACCTTCTCACGCATTTGATCACTCAGCAGCACATCCCACAGGGCACCGAACACTCCCGCGGTGTCCAGCAGATGGCAGAGCACTGGGTACGGGCGCGGAAGACCATGCTCCTTGCCCCAAAACCGGGTGTCGACCGGGACATGTCCCGGCGAGACGGACTCACGCTTCATCATGACAGCCATGCATAACAGCCCCCACTGACAACGCATCCTCACCTGCACGGATACCAGAACAGATCCCAAGCAGGGCCGTAGAATCCAAGCCGTGGAACCTCAGCCGACGCGCGGGCAGACCAATTCAAGGCGAGTCCATTCGGATACCGTAAAGAACTCGCAAAGCACCTGAAGGAGGCCAGGTCAGGAAGG # Right flank : ACGAAGACGCTTGTCGGCGACGCTTGAAATGTGGCTCAGTCAAGATTTCCGTGAAGCCGATCGTGCGCCTGTGCGCCGGTGACGCTCCGTCACAGGCCGCGTGATACTCGCCGAGTGTGGGGAGCTGCTGAAGACCATGTTTCCGCACCTCGAAGGGGTGCTGGTGGAAGAAGTGAGCCCCGAGGGTGGGGTGTTGCACATTGTGGCAAGAACCGTGGAGTCGGTTCCGGTGCCGTGCCCGGACTGCGCAACGCCCTCGGTGCGACGGCACAGCGGATACCAGCGCCGTCTCGCCGACGGTGCGGTCGGCGGCCGTCAGGTGTCCATCGAGCTGACCGTCCGCCGCCTGTTCTGCGACGACCAGAGATGTGCACGGGTGACCTTTGCCGAGCAGGTCGACGGGCTGACCGTGCGGTATGGGCGTCGGACGCCGCAGCTGCGGTGCTTGTTGAGCGCGATCGCGGTGGCCCTGGCCGGCCGGGCCGGAGAGCGCCTCGCGG # Questionable array : NO Score: 5.44 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.33, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAACCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAACCGG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 221638-221972 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJHX01000004.1 Streptomyces avermitilis strain NBRC 14893 contig4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 221638 30 100.0 31 .............................. ACGCCGACCGAACCGTCATGCTGACCGTGGA 221699 30 100.0 31 .............................. CCACCGTGGATATCAAGCTGGCCGAGCGGAA 221760 30 96.7 31 .............................T GGCGCCAGCCGATGGCCGTGCGCTCACCGTC 221821 30 100.0 31 .............................. ACGGGGACACGCTTCGCGTGATGCTGGACCA 221882 30 100.0 31 .............................. CGGACAACGAGGTGCGGGACGGGATCCGGTC 221943 30 93.3 0 .....................A.......A | ========== ====== ====== ====== ============================== =============================== ================== 6 30 98.3 31 GTGCTCTCCGCGCGAGCGGAGGTGAACCGG # Left flank : GGCCCGGCCGGCCAGGGCCACCGCGATCGCGCTCAACAAGCACCGCAGCTGCGGCGTCCGACGCCCATACCGCACGGTCAGCCCGTCGACCTGCTCGGCAAAGGTCACCCGTGCACATCTCTGGTCGTCGCAGAACAGGCGGCGGACGGTCAGCTCGATGGACACCTGACGGCCGCCGACCGCACCGTCGGCGAGACGGCGCTGGTATCCGCTGTGCCGTCGCACCGAGGGCGTTGCGCAGTCCGGGCACGGCACCGGAACCGACTCCACGGTTCTTGCCACAATGTGCAACACCCCACCCTCGGGGCTCACTTCTTCCACCAGCACCCCTTCGAGGTGCGGAAACATGGTCTTCAGCAGCTCCCCACACTCGGCGAGTATCACGCGGCCTGTGACGGAGCGTCACCGGCGCACAGGCGCACGATCGGCTTCACGGAAATCTTGACTGAGCCACTTTTCAGCCGTCGCCGACAGACGCTGGCACTCGGGACTGAGACGGG # Right flank : ACCGGCCAGGAAGCAGAGGGTGATGACATTCGGTTCGGTCCTCGCCACCATGGCCGTGCTCGCGGTGGCCGCCGCACCGAACCTGTACGCGACCAGCACAACGAGCCACGCCGCCTTGGCCCAGGCGTAGGGCGTCTCGAAGACGACCATGGGCCGCGCGATCCGGCGCGAGAACTGGAAGCACGTGGACTGATCCGCTCATGGCCAAGTCGTCTTTCGTGGGCGCTGGTAGTCCACGGAGTACACCCGGGACGGACGCGAGAGCCGGCCTGGGTTGACGGTGGTCAGGAACAGGTCGGCCAGGGGCAGGCCGGTGAGGCCGGAGCTGTAGAGCAGGGTTGGGTCCGGCATCTCCATCTCGACGCCCTGAGGTCGGACGGCACCTGCGGGAACTGCGCGAGGACGTGCGCCGGGCGGGCGGGGCGCGTGCGGCGGCCGACGCGGTGGAGCGTCTGCTGACGCGCCGGCAGGCCGGGGAGGCTCAGCCGCTGGGCGGAGTC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAACCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAACCGG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //