Array 1 682-2235 **** Predicted by CRISPRDetect 2.4 *** >NZ_OALA01000024.1 Neisseria meningitidis strain Neisseria meningitidis isolate 23356, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 682 36 94.4 30 ........G...A....................... TTCTATTATAAAAGCTGCCTGACTTACTCG 748 36 100.0 30 .................................... AGCATTTGGGCGGCACGGGCAAAGCCGTCA 814 36 100.0 30 .................................... TAAACCTCTGTCGGTTGGTTTGCTTAGATT 880 36 100.0 30 .................................... CGAATTGGAAAAGTTGCCCTACCGGTGGGG 946 36 100.0 30 .................................... GTCGCATGGTAAAATAACCACCGCTTTACA 1012 36 100.0 30 .................................... AAACTAAAACTTTGGAAAGTTGGAAAGTTG 1078 36 100.0 30 .................................... CGGCGCATCCCCTTTAATTTAATATCACTT 1144 36 97.2 30 ............A....................... ATAGAACCTATGGCTGCTACGGCGTTGACA 1210 36 97.2 30 ............A....................... TTTTGTGGAGTTTTGTTATGAGTGAGGGCA 1276 36 100.0 30 .................................... CTGCAAGCATTTTCATCATCGGCTGTCATA 1342 36 100.0 30 .................................... CTGCAAGCATTTTCATCATCGGCTGTCGTA 1408 36 100.0 30 .................................... CTGCAAGCATTTTCATCATCGGCTGTCATA 1474 36 100.0 30 .................................... CTGCAAGCATTTTCATCATCGGCTGTCGTA 1540 36 100.0 30 .................................... GGAAGAGCGGCATCTGAATGCGGAAGAAGA 1606 36 100.0 30 .................................... GCCTGATGCCGTGTCGTGCGACACCTGAGA 1672 36 100.0 30 .................................... ATGATGCCGAAACCCTGCAAGCCCTGAATA 1738 36 100.0 30 .................................... GCCTGATGCCGTGTCGTGCGACACCTGAGA 1804 36 100.0 30 .................................... ATGATGCCGAAACCCTGCAAGCCCTGAATA 1870 36 100.0 30 .................................... GCCTGATGCCGTGTCGTGCGACACCTGAGA 1936 36 100.0 30 .................................... ACCAAGATATATCAAAATTGTAGATGAAAA 2002 36 100.0 30 .................................... TGCGGAAAGCCTCCATGCTTTGCAGCACTG 2068 36 100.0 30 .................................... AATTTGCGCCTTGCTGCATTGTGTAGTTTG 2134 36 100.0 30 .................................... TTCTTCCCGATTGAGGTTGCTAGTTTTGTC 2200 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 24 36 99.5 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAGCGGTTGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGCCGGAAGAAGGTGCTCATGAGAAATCTCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGATTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : TACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.68 Confidence: HIGH] # Array family : NA //