Array 1 2081577-2080264 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP015399.2 Lachnoclostridium sp. YL32 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 2081576 33 100.0 33 ................................. AGCATCAATAGCAATTAAAATCGCTACATTAGC 2081510 33 100.0 35 ................................. ATATAAGTTCATATACTTGTCCTCCCTCTAAATAC 2081442 33 100.0 34 ................................. AATTTGCACATGTGGTGCGCCCAACTTTAGATGC 2081375 33 100.0 34 ................................. ACGCAAATCAGAAGCCAATAAAAGACAAGGTAAC 2081308 33 100.0 35 ................................. CTAAAAATAGGTATAAAAAATACAGCTCCGCAAAC 2081240 33 100.0 37 ................................. ATTCCATTGGATGGTTCTGAACATGCGGTATCCATAG 2081170 33 100.0 35 ................................. TTGCCCAAAAAGCAACTTATGATTTTGAGCAAAAA 2081102 33 100.0 33 ................................. GCTAAACTTTCGGATGAAGTCCCTCAGGTCCAT 2081036 33 100.0 36 ................................. CGTGTCAGGAACATAAAATTCACCTGTGCCATACAC 2080967 33 100.0 34 ................................. AATAAGCTTTCTATATTCATTGGCAGAAATTTCA 2080900 33 100.0 34 ................................. TTCCATCTTGCAAACCTCCATAATCTCTGATATA 2080833 33 100.0 34 ................................. TTCCGGCATCATATGCAAGGGTATTAAGCATATT 2080766 33 100.0 35 ................................. CCGGATGTTGCGGCTCCACAGTTCCCGGCTGTTGC 2080698 33 100.0 35 ................................. ATCACGCCAATAGACGATACCGCCACGACACCGCC 2080630 33 100.0 34 ................................. TCTGGGAGGCCGTCAACCAATCGGTTAAATGTTA 2080563 33 100.0 34 ................................. TTTAAGTATCGCAATCCATATAAGCTCTTTATGG 2080496 33 100.0 34 ................................. TATCTCAGGCCAGGGATATACCCTTCTCTTTCCC 2080429 33 100.0 34 ................................. TCCAGATTACAATAAATATCGTGAGAATGCATTT 2080362 33 100.0 33 ................................. TTTACGATAGACCTGGCCATAATGGCGACAGGA 2080296 33 97.0 0 ...............A................. | ========== ====== ====== ====== ================================= ===================================== ================== 20 33 99.8 34 GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT # Left flank : AAGTCCTGGAATTTCCGGAGAAATGTGGATTTCTGGCAGTGGCCGGAACAGCGGTGTCCCTGAAAGCGGGAAATCTGGCAGCTGTAATGGAACGCCAGGGCAGGGTACTGCGCATTTACGATGTCAATGATATGAAGGAAGTGATGGCGGAATTTGTCCGTGCGTTCAAGCAGGGAGCTATATATCCGGAACAAAAGAGGCTTGTTTTGAAAGAGTATCCGGCGGAGGCGTCAGAGGCACTGCAGCATGCGGGATATATGCGTGAAATGAAGGATTATGTAGTGTATAAGTAGAGTGTGATTTCTGTGAGGTGGAATCCCATCAAACCAGGTGCGAATGCCAAGCTAACATGAAATGCCTGGGAGATTCGCACCTGAAAAACAGCGGAAAAGCCGTGAAAATAGGCTGAGTGAATGGATGGAGGAGGTTGAAATAAGGAGGGGAGGACATAATGCATAAAAAGTTAGGGGGATGTGGAGGGATTGTTGGATAGTTTTGCT # Right flank : ACAACATGCTTTATATACATATGCTTTTCCTTTCCACCACTGCTGGATATGTGGTTGATTTTAGCTGGCTGATTTCGTGATAGGCTTCCAGAATACCATTTTTGGCTGCTTTTTATACAGTATCAATATCAACACAATACCAACACTCACCCAATACCACCCCAATACTAACACCAATTCTTAATCATGCAGAACCATTAGGCAATTGCGAAACTCACTGACCAGAATTTATGCACATCGTATAGGAATGAATCTAAATTGAATATATTAAGCAAGATATTTTGTGCAAGGTGAATATAAAAATTCAGAGTTTCGTAATTACCTAATGCAGAACCATTTATGAAAGGAGAGGGAAAAGCCATGAAACAGATGTCATTATTCGATGACAGAGAAGTATACAATCCCCTGGCCAGCAGGCTGCGTCCGGATGACCTGGATGGATTTGTGGGACAGGAGCATCTTTTGGGAAAGGGGAAGCTGCTGCGCCAGCTCATAGAGCA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 3048835-3047872 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP015399.2 Lachnoclostridium sp. YL32 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 3048834 32 100.0 34 ................................ GGTGTATAAGTCCAACCCCACGGAGCTGTCAATA 3048768 32 100.0 34 ................................ CGCAAAACTCGGAACGGGTGCACAGCCGCCCTAC 3048702 32 100.0 36 ................................ TCTACAATATCCGCAACCTCGTTTGAATCCGGGGTC 3048634 32 100.0 36 ................................ ATCCTGATGGAATCAACCACTATTCCGGAGCGGAGC 3048566 32 100.0 34 ................................ TTCTAGGAGGAATGAAACTTGGAGGACAAGCGGA 3048500 32 100.0 35 ................................ CAGGTGTGGAGGACTTTGAGCTACAGATTGGCACG 3048433 32 100.0 34 ................................ GCTGGATGACGCAGAAGCCCTATCAGTCGTACAG 3048367 32 100.0 34 ................................ TGATATGTAGCCGGCCATTGTCTTAAAGACCGTC 3048301 32 100.0 36 ................................ CATTATCTGCTGGTACTGGTCAAAGTCCATATCCTC 3048233 32 100.0 34 ................................ TCGAATCACATCCGCAAATAAACCAATTGCAACC 3048167 32 100.0 34 ................................ CTTGGGATTGAGTGAGTGGTTGGCATGGCTGCCG 3048101 32 100.0 34 ................................ TATCTCTCTTATGAACAACTTATTCCACACCGCC 3048035 32 100.0 34 ................................ CGTTCCAGTAAGCGTGCCAGTGTTAAGGTATGTA 3047969 32 100.0 34 ................................ CAAAATCATAGGCCAGTGATGTGGTGATTTTAGA 3047903 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 15 32 100.0 35 GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT # Left flank : TGCTGGTACTGATTACATATGATGTGAATACGGAAACCGCCGCAGGCAGGGCCAGGTTGAGAAAGGTTGCAAAGCAATGTGTCAATTATGGCACCCGCGTCCAGAACTCCGTATTTGAATGTATTTTGGATAATGCCCAGCTGATAAAGCTAAAGGCGATACTGACAGATATAATTGATGAACAGACGGACAGCCTTAGGTTTTACAACCTTGGGAATAAACACACTACAAAAGTGAACCATGTTGGGATGAATAAGGGGATTAATGTGGAAGAACCGCTGATATTCTGACCTAGCCGCGGGCGGTAAAGCGGTATAAAGTATTTTGGTGCGAACCTGAAGCAAACATGGATTTACGGGGGGATTCGCACCGGAAAATTTGCACAATAAGAACGGATTTGCGAGTATACAGGGATGGTTGACCGTGATTTGAGGGGGTGGGATATGATTTGTTTGTGGAAATGTGATGAAGAATAGTAGTGGTTATTGTGTAGTATTGCT # Right flank : CAGTATACGGATTATTTTACCCGTATTAGAGTAAGCGTCAAATAAGATAGTGGATAGAAAAATAACCACTAGTACAGCATTGCCAAAATAATAATGAATAGACGTTGCTTTTTTATTGTAGTCGGTGCATAATAATTCTATCACTAAAGAATGGATGGGTTATTATGCGAAGGAAAACAATTGATACTATTCCGGTTTTATCTGATGCCATGAAAAACATATTATCTGCTTTTTCAAAAAGCCGCTCCCTTCCGTCAGGACTGGTCAAAAGAGCCAGCATTGTCCTGCTTGCGTCACAGGGGGAACTCAACCAGAATATTGCGCCACAGGCCGGGCTTCATTATAATAATGTTGCCACCTGGCGCAGTCGGTTCCTCGCGGCGCTCCCAGCCTTGGGGAGGATTGAAATGGACGACCCGGAAAGGCTTGAAGATGAGATACGGGCAGTCCTGTCCGATAAAAAACGCCCCGGTGCCCCGTCTGTTTTTACGCCGGACCAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //