Array 1 92302-89639 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAIP01000009.1 Prevotella veroralis DSM 19559 = JCM 6290, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================================= ============================= ================== 92301 49 100.0 28 ................................................. ACTTTCAGATTGCACATACATTGAACAG 92224 49 98.0 28 ................................................G GGCATGACAGCGTTTCGCACGAGTTGAC 92147 49 100.0 28 ................................................. TCAACACCAACATTTGAATTTGGCGTAG 92070 49 100.0 28 ................................................. CGAGTGATGCGCCAATACCATTAGACTG 91993 49 100.0 28 ................................................. GTATATACTTAATCTGTCGCCGTCTGTA 91916 49 100.0 28 ................................................. GTACTTGATGTACTCGAGGACGTAGACC 91839 49 95.9 28 ...............................................CG TTACCGAATGGACTGGGAAACATCCATC 91762 49 100.0 28 ................................................. GTAAAGTCATTTATACACTTAATATCTC 91685 49 95.9 28 ...............................................TT GTTTAACGTTTAATTACGCTGCAAATAT 91608 49 98.0 28 ...............................................C. GCAGTCAGCAAGAGAATCAACAAAAGAA 91531 49 98.0 28 ...............................................T. CCCAAGGTAAAGCCTTGGCTAATCAGCT 91454 49 95.9 28 ...............................................CT TTGTTAATGATAGTAGATGCAGCAGCGC 91377 49 100.0 28 ................................................. TAGGGATGAGTTTGATAGATTATATCCC 91300 49 95.9 28 ...............................................GC TTAATCAAGGACGGATAAGTTTGCCTCT 91223 49 95.9 28 ...............................................GC AGCTAGCATATCATCTATCTGCATAGTA 91146 49 98.0 28 ................................................C GAGAACAAAAAACTACACATTGAACACG 91069 49 98.0 28 ...............................................T. TTAAAATCGATTGCGTTGCCAAAATCTA 90992 49 98.0 28 ...............................................G. TGATACGATACAGATACACAACGCTTCG 90915 49 95.9 28 ...............................................GG CGGAATAGCGAAGCCTGCGAGCGACCCC 90838 49 98.0 28 ...............................................T. TTGCTTCAAATCTTCAAGGACTATTGAA 90761 49 100.0 26 ................................................. TTAATTATACCCCGATTAAGGGGGTA 90686 49 95.9 27 ...............................................CT ACTGGTGCTGATGGTCGACACTCTACG 90610 49 98.0 28 ................................................T GCATGACCGCCTAATATATTATTTAGCA 90533 49 98.0 28 ...............................................C. TTCGGTTACGTGCCTCGTTACTCTGGTC 90456 49 95.9 28 ...............................................CG TCTAAATTATAAATATAATGATATTATT 90379 49 100.0 26 ................................................. ATTAAAAACAAAATTATGGAAAAGAT 90304 49 98.0 28 ................................................T TATAAATATTATTTGGATGCGATAGGGA 90227 49 100.0 28 ................................................. TGTACGCGTACCTATTTATATATAATAT 90150 49 98.0 28 ...............................................C. GACAATTCTGATAGTGCTCTATCTAATA 90073 49 95.9 28 ...............................................GG CTTAACTTTTCTACCTATGTTTTCGGCA 89996 49 95.9 29 ...............................................CC ATTCGGCTACGTGCCGACATACTCCAAGT 89918 49 95.9 28 ...............................................TC TAATTGCATCCTATACTGCTTAACACGA 89841 49 95.9 28 ...............................................GT TCGGAGTGGAATTTTAATTTCTCACCCT 89764 49 98.0 28 ................................................T ATTTGTCGTACCATGCCTTATAGAATGC 89687 49 98.0 0 ................................................G | ========== ====== ====== ====== ================================================= ============================= ================== 35 49 97.9 28 GTTGTGATTTGCTTGAAAATATGTACCTTTGTGGTAGCAACAACAACAA # Left flank : TTGTTGATTGTACTTGAATAATTGCATAC # Right flank : ACTATTCATAAGTTTCTGAATATCAATAAGATCGTTAGTTGTTAGAAGAAAATAAAAGTAATACCACTAAACAAAATCCCACTCGTGTAGAGTGGGATTTTCGTTTTCTATAAATTCTGTATTAGAATAGTTCTAGCTGTTGTCCTGGAGCATTGGGTGGTTTAGGCTTCTCACCATAGAAAAGTTGGATATTAGCAAATTGCTTATCAGTAATACACAATATTCCGACTTTTCCGTGTTTAGGGAGGCAAGCTTTCACACGCTTTATATGCACCTCTGCATTCTCCACACTTGCACAATGACGGACATAAATGGAGAACTGAAACATTGTAAAACCATCTTTCATCAATGATTTACGGAAGTCAATATATGCTTTCTTTTCTTTCTTTGTTTCTGTTGGTAAATCGAAGAATACGAGAATCCACATAATTCGATATTCACTAAAGCGGTAAAAGCTGACCATAATAAATAAATGTTACATCTCTGGATAACTAATACGA # Questionable array : NO Score: 4.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:-0.5, 7:-0.01, 8:1, 9:0.38, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTGAAAATATGTACCTTTGTGGTAGCAACAACAACAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.83%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTGAAAATATGTACCTTTGTGGTAGCAACAACAACTT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.10,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //