Array 1 282151-281258 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_KV757177.1 Streptococcus agalactiae strain M19 Scaffold1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    282150	    36	 100.0	    30	....................................	ATCACCGTATGAAATCCATTCACCGTGATG	
    282084	    36	 100.0	    30	....................................	TGTCAATTTTCGTGTAAAGGAGGTAACTTT	
    282018	    36	 100.0	    30	....................................	AAAACGATTATGTTTGTGCTATGTGCGGCG	
    281952	    36	 100.0	    30	....................................	AACAAAATTGAATATAGGGATTTAAATGGT	
    281886	    36	 100.0	    30	....................................	CTTTCCATCCATACGAACCCCAGTTATAGT	
    281820	    36	 100.0	    30	....................................	TAAAAAATACCAACTATCAAAAGTGATAGT	
    281754	    36	 100.0	    30	....................................	CGTAGTAGTTATTCCAATTCTCTATATGTA	
    281688	    36	 100.0	    30	....................................	AAACCACTTGATGCTGTATCTCTCATAAAA	
    281622	    36	 100.0	    30	....................................	ATTGTGATACAGATAGTTTATACCTAAAAA	
    281556	    36	 100.0	    30	....................................	TGGTTTAATACTGTAAATTGTTCAATATCA	
    281490	    36	 100.0	    29	....................................	CCCTCAATTTATTGACATTATTAATATAA 	
    281425	    36	 100.0	    30	....................................	AAAAAGAGCCAGAAACTCAATCAGAAGAAA	
    281359	    36	 100.0	    30	....................................	TGGTGTTGGCTGTTCTGGGATGACTACGTT	
    281293	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        14	    36	 100.0	    30	GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	                              	       

# Left flank :   CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG
# Right flank :  TTTAATATCGTCTATATAGATTCCTGGACGGTTTTAGAGCTGCGCGGTTATTATGCTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTAGCAAGCTAACGAAATCATCCCAGTTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATATAGAGTTGTGTCTATTAGTAGAAAATTCGAATTATTTTTCGGATTCAAAGAGAATGTGTCGATAGAAGAGATATGAAAGACTATAATTCCAACCTTATTGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTTGCAAGCTTACAAGGAAAGTAGTGGAGAACCTATCCATAATCAACTAACAGCTATGATGGATCTCACCTATTAA

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:58.33%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-0.20,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,4.87   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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