Array 1 64169-61377 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCKN01000002.1 Moraxella catarrhalis strain 1098655R NODE_2_length_347716_cov_55.487702, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 64168 28 100.0 32 ............................ ATCATGCCTTGTACCATAAATACTTGCATAAT 64108 28 100.0 32 ............................ CATGGGCGGCGGACTGGTGGCGTTCATCAGAC 64048 28 100.0 32 ............................ CCGAGTTGAATCAAAGCATTGCTGATGCTCAA 63988 28 100.0 32 ............................ ATACCCTTTATTAAACAAAGCAAAAAAGTCGT 63928 28 100.0 32 ............................ TATTTCTAGCCATCGCCCTGCTTGCCACTGCG 63868 28 100.0 32 ............................ TTTACCTGTGTAGTTATCTAAAGGTATTGCTT 63808 28 100.0 32 ............................ ATCGCACGAATGCACAAATTCAATAAAGAATT 63748 28 100.0 32 ............................ ACTGCCCCGAATATTCGGGGCGGTAGTATCAG 63688 28 100.0 32 ............................ TTGTAACCCAGAGACCTCGGTAATCGTATGTC 63628 28 100.0 32 ............................ TGTTGAGCAGCAAGTGTAATATTATCTTGCAT 63568 28 100.0 32 ............................ ACGCTTTCAACCCAATCGCCCCAAGTACCACC 63508 28 100.0 32 ............................ TTTACCTGTGTAGTTATCTAAAGGTATTGCTT 63448 28 100.0 32 ............................ ATCGCACGAATGCACAAATTCAATAAAGAATT 63388 28 100.0 32 ............................ ACTGCCCCGAATATTCGGGGCGGTAGTATCAG 63328 28 100.0 32 ............................ TTGTAACCCAGAGACCTCGGTAATCGTATGTC 63268 28 100.0 32 ............................ TGTTGAGCAGCAAGTGTAATATTATCTTGCAT 63208 28 100.0 32 ............................ ACGCTTTCAACCCAATCGCCCCAAGTACCACC 63148 28 100.0 32 ............................ ACGACGGTCGAACAGGTATTCGCTGCGTGAAA 63088 28 100.0 32 ............................ GTAATCAGAAGGCGGTGGTCTGCCCCCTCCAT 63028 28 100.0 32 ............................ ATGACAAAGAACGGTTAAGTACAACGGCAATC 62968 28 100.0 32 ............................ AACTGTACCTGCTGGGGTGTATTTAAACGGCG 62908 28 100.0 32 ............................ AAAAATACAGCCAAGTCAAAACGCAGGCAGAT 62848 28 100.0 32 ............................ GCCAAGCGAGCCGTTTATTTATGAAGTGGGTT 62788 28 100.0 32 ............................ TTTTGGTTGATTATCTATTTCAGAAACTCTAT 62728 28 100.0 33 ............................ CCGACCCCCTTACTTACTGTATATAAATCACCA 62667 28 100.0 32 ............................ CTGTGCTTGAGTCTCTTGGGACTTCTGATAAG 62607 28 100.0 32 ............................ AAGCATTGAAAGTGCGGTAAATTCAGTCAATG 62547 28 100.0 32 ............................ AATAGCTAATCGCACGAAATACGCCAGCCAAT 62487 28 100.0 32 ............................ TGCGAAAAAATCAAATCTAGTCATATTTTTAC 62427 28 100.0 32 ............................ ATAGTGCCTGTGGGTTGATAAATCTTTGCCAA 62367 28 100.0 32 ............................ GCTAACAGAGCTTTCAACTGTGTTAATGCGTA 62307 28 100.0 32 ............................ TCTCTGGTCTCACCATTTTCTGTTACACGCGC 62247 28 100.0 33 ............................ TCAGTGGGCTATACTGATTACATGATTGATAAG 62186 28 100.0 32 ............................ GAACATTCGGGGTGGCAGTATCAGCATTGGCA 62126 28 100.0 33 ............................ TACTATACCTGATTCTTATTCTGTGAATTATGT 62065 28 100.0 32 ............................ AACTTTTTCGTAATGCAAATTAAGCAGTTCTG 62005 28 100.0 32 ............................ AGTTGAAAGCTCTGTGAGTGGTAACACATCTA 61945 28 96.4 32 .......G.................... AAATGATGGCGAAAACTGGACAATCATTGATG 61885 28 100.0 32 ............................ GAAAACATGGGCTTTTTATCGCCGTGCGGACT 61825 28 100.0 32 ............................ TACAACACTCACAGGCTATGGTATTGGTAATG 61765 28 100.0 32 ............................ TTACACGCTACTGACCTACATTTGGGTAGGAC 61705 28 100.0 32 ............................ AGTTTCAAAATATCAACTTCCCCTAGTAGCTT 61645 28 100.0 32 ............................ CGTAGCATTCAACGCATCAATCGTATTTTTGA 61585 28 100.0 32 ............................ TTTGCCATAAATCTCACGCACGGACTGCCGTC 61525 28 100.0 33 ............................ AACCGCTTTAAATGCAACAGATAAGGCATCTGT 61464 28 96.4 32 .....T...................... TGGGGAAGTTAGGCATTTAAAATGGCAGGATA 61404 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 47 28 99.8 32 CTTCACGACCGCACAGGTCGCTTAGAAA # Left flank : TGCCTGTGCCAAGTAAAATGACCGTCGTGTTGGCGATCGGAATATTATAATAGTGGTTTTGGTATTTCGTTTCGGTCAGGTATAAGATACGCCCATCTTTTTGCATGACTCGGCAATGCTCAAGATAAAATAAATTCGCCCGTTTGGAGTGTAAAATTGCTTTCAAATCGGTCGGTTTGAGCGTATTCATAATAATACAAATCCATGTTTAATGATTCAATTTTATCCTAACAATTTTCAACATCATTTAATATGATTTTATTGGATTATAAACTAAAAATAAATTTATACCAATCATTTTTTAATTGTATTTAGCGATTAAAATGTTTTAAGATAACCCAACCAGAAGATGGAAAAATAACTGATTGACCCTTTATTTTTTTACTATTTAAAAACTTGAATATTTTCAATAAGTTATAACATGAAGATTTTTGATTGGGTTTTTGACAAATTTTATCATAACGACTTGTTATTTCTTATTATTTTGGTTTATACTAACT # Right flank : TTTTGTTCTATGGCTACGCTGATTATTTAAAATTTTTGTGCCAATCCCTTGAAAATTTTATCCTTAACCATTATGAAGACGGGGAATTTATATTAACTTTTTTGGGGCAATTTATGACCGAGCAAACCACCGAACAAACCACTATGGAAGAGATTATGGCTGAGACGACAACCGAGCAAGTCGAAGCACTTCATAGCCAAATCCAAGCGCTAGAAAATGAAGTCAAAGAAGCCAAAGAGACTGCTGCGCGTGCCAATGCCGAAAGCTATAACGCCCAACGCCGCATGGAACAAGAAACCGACAAAGCCAAAAAATTTGCACTACAAAAGTTTGCCAAAGAGCTTTTGGAGGTGGTTGACAACCTAGAGCGCGCCATTAAAGATACTGAAGAGACAGGTGCAGATGACGCATCACTTAAAGGCATTCGCCTAACACATAAAGTACTGCTTAGCGTTCTTGAAAAAAATGGCGTCGTGGCCGTGGGTAATGTCGGTGATACA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCACAGGTCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.10,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //