Array 1 230799-227860 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB906799.1 Teredinibacter turnerae T8412 G009DRAFT_scaffold00004.4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 230798 32 100.0 34 ................................ GGCTACTATCCGCACATGGTCGTACAAGCGGATA 230732 32 100.0 34 ................................ GAGATTTTGCGCCCTGGTCAGTTGCACGGCATAC 230666 32 100.0 34 ................................ TGGGGTACGTCGTAGCTATCTAAAAGGCGGTTAA 230600 32 100.0 34 ................................ GGGGATAAACACGTCTATCTGAAATAGCCCAACG 230534 32 100.0 34 ................................ AAGACGGCTGATAACCCAGTCGTATCGATCAGGC 230468 32 100.0 33 ................................ TTAGTGACTTTGACACAGCAACATTGATAGATC 230403 32 100.0 34 ................................ TTGTATCCGCGGTAGTCTGAAATCATGTAACTAA 230337 32 100.0 33 ................................ TGCCCTGATGATCAAGAATGTGGTTATGACTAC 230272 32 100.0 34 ................................ TCTATCCATGTCCGATTTATCGGCGACACATTTG 230206 32 100.0 34 ................................ AAGCTGTAAAGCGTCAGACCTGGAGCCTAATATT 230140 32 100.0 35 ................................ GGCCTGCGCATTTACAAGAACCAAGATCACTACCC 230073 32 100.0 34 ................................ GCGCGACGAAAACGCGAGCGCTAATGCCTATATG 230007 32 100.0 34 ................................ TCCCTGCTTTGGTACCGATAAAAATTATCCGCCA 229941 32 100.0 34 ................................ GAACACCGCTCCACTGCCCCGCAACTCCCTGCAA 229875 32 100.0 34 ................................ CTGGTTTATATCGGCTTGCAATACATGAAAAACT 229809 32 100.0 34 ................................ GCGTTTAGGGCGCGAGTACGAATACGAAGACGGT 229743 32 96.9 34 .............T.................. CCATTTGACCAGAAAAATTATCCAATGGCTGTGC 229677 32 100.0 34 ................................ TCAATCCAGCACGGCCCTGTAAAAGAATTTGGCC 229611 32 100.0 35 ................................ GGCTAAAGAAGTAACCACCACGGCTAGCGGCAACA 229544 32 100.0 34 ................................ TCTTCATCGCTGAGGGCAACGTTAAGTTGCTGTG 229478 32 100.0 34 ................................ TAACTTTGCGTACTCGATGAGCACTTGTAGCAGC 229412 32 100.0 33 ................................ TGGTCATCTGTAAGTTGAGATATCAGAACCTCA 229347 32 100.0 34 ................................ GATTCGATGAAGCTGTAAAAAAGGTCACTATTGA 229281 32 100.0 35 ................................ TATCGTTGATAAAACTGCGTTGCCTGGAATAATAG 229214 32 100.0 34 ................................ TTTATGGACCCACCTTACCTACTCGAAACGAGAA 229148 32 100.0 36 ................................ GACTTCCACAGTAAGAAAAACGGCCCCGCATGGGTT 229080 32 100.0 34 ................................ ATATTACCTATGTACTCACCAAAGCTTTTTAGAT 229014 32 100.0 33 ................................ CTGCGAGGGCGGCGAGAATTGCAGGCGTACACC 228949 32 100.0 34 ................................ GGCAATATCGCCAAAGGCAATGCACTTTTCCGCG 228883 32 100.0 35 ................................ TGGTGAGTGTGCGGCTAAGCCGAAGCATAATTGGT 228816 32 100.0 34 ................................ ACGGCATGCAATACGTACTCGCCGCTGCTGCCCG 228750 32 100.0 33 ................................ GGCTCAGCGAAGAGCTACACCCGTTTGTAAAAG 228685 32 100.0 34 ................................ TTGCTCAAGCTGCGCGCGTAAGAACGGTATTCGC 228619 32 100.0 34 ................................ AAAAGAATGTTACGGGGAAGAATACGGCAGCATT 228553 32 100.0 35 ................................ ACTTCGATGCTTACATCTGTCGCGACGTGATCCAC 228486 32 100.0 35 ................................ AAGAGACAACAACTAAAGCAGGGGCGCCAGCAAGA 228419 32 100.0 34 ................................ GGGTGGTGTATTTGTGCTGAGTGTAGTCGACAAT 228353 32 100.0 34 ................................ ACCACGCTCTCTGTGATTGTTATGCTGTATGGGT 228287 32 100.0 34 ................................ CAGCAGGTGAGTCTTGTTGAGCTTGCTGACCCAT 228221 32 100.0 35 ................................ CTTAAGTGGAAATACCATTGCGCTCGCTGATTTCT 228154 32 96.9 34 .............T.................. ATTTCCCTCATAACCCCTAGATCATTTAGAGCTG 228088 32 96.9 34 .............T.................. TCAGAGGGTGAATCCAGCTACAAGCTGGATACAT 228022 32 96.9 34 .............T.................. GATCCCAATGAAGCGAAGGAGAGCGATCCGGAAA 227956 32 96.9 33 ....................A........... TAAGTAATACCGCAGGTATCAACAAATACCGGC 227891 32 78.1 0 ...........T............GGGAG.G. | ========== ====== ====== ====== ================================ ==================================== ================== 45 32 99.2 34 TTCGCGCTCCTCGCGAGCGCGTGGATTGAAAC # Left flank : TTGTATATCGTTAAACGGACATACTTCGATGATGGTTCTTATTACATATGATGTGAGTACGGAAGGGAATAATTCTCAGAAAAGATTGCGTCAAATTGCAAATGCGTGCCTGGATTGCGGGGTGCGGGTGCAATACTCGGTTTTTGAGTGCGAGGTAACCCCCGACCGCTGGGTACAGCTACAAGCGCAATTGTTTGACATTTACGACCCATCGGTGGATAGCTTGCGGTTCTACAAGTTAGGCAAAAATTGGCGGGACAGGGTAGAGCACCACGGAGCAAAGCCAGCGCTGGATATATATCAGGACACGCTGATTCTATAAAAACGCTAACCACCGGTTCTCATTAAAACCCCGGTAGGTTAGCGACTGTTATTTTCTATTTAATTTCAATGGGTTACTCAAGATTCGTCTTCAGTTAAAGGAAATTATTGTCAATTTTAGGGAGGTTAGCGAATATCACAATTGAAAGCCCCGGTATTAAAGGCTTTCAGAAGCTACT # Right flank : CGGATTTTTCACAGCAACTCATACGATTTTGACCTGCATGCTCATAGATTGCACCCTTAATGGGGCTTCGGGGTGAAGCTGCTCGAAGCTGGAAAATGTTATCGCTGTTTTTATTGATGCGCCTAAAAAATTTTAAATAATAAAAATATTGACTTTGATTGCGTTGAGGCGTTCTGCGCTCATATTATAGTTGCGCGTTATTTTGATTATGGGTTTAGCTGTCACTTTTTGTATTAGCGACATCGTCGATTCCCCCAAGTCCCCCAATTCCCCCAAAATTTCATCAGCACCCGTCTAATGTAAAAAAATTCGCCACACCAAATTCAAAAAAAATCGCAATTAATTTTCACCGATTTGTCACTTGTTAGAATCCATCTTGCGCCGGCTTTTTCTGTTTTGGTGCAATCGCCAGTTTGTTTGTTTTTTTCTCCCCTTGGTGGTGCGTCGGGCTATTTTTATACGGTATTTTTAATAGAATAGAGTCAATCGATAGTTGGTGG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCGCTCCTCGCGAGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCTCGCGGGCGCGTGGATCGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.80,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 59558-59876 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB906812.1 Teredinibacter turnerae T8412 G009DRAFT_scaffold00017.17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ===================================== ================== 59558 35 100.0 37 ................................... AAAAGTTCAAGCATAGTAGTCTCCTTAATATGCTTTT 59630 35 100.0 34 ................................... AATAAGTATGAAGATTTGTTTTAAGATTTTATAG 59699 35 100.0 36 ................................... TCCTTGTTAAGATCAGCATAATTGGCTCCTTAAGAC 59770 35 100.0 37 ................................... TATCACTTCTTCGATGATGCGTTCCCTGCCTACAAGC 59842 35 94.3 0 ...................C..............G | ========== ====== ====== ====== =================================== ===================================== ================== 5 35 98.9 36 GTCGCAATCGACATTAGCCGCTAAGGCTGTGAAAC # Left flank : TATTAGCCTATGGGGAACGGGTGCAACTCTCTGTTTTTGAAATTGCGCTGAACAATAACCGTGAACTGGCGGCCCTGAAAACACAATTGCAAACGCTGATGGAAGAGGGGGACGATTTGCGCTTTTACTACCTCTCCAAAGAAACACGCCGGCAAAGTGAAGACGTTTACGGCAACGCCATTGCCGATTTTCCGAGTGTGATTATTGTGTAGCGCCAGTGGCGAAGCAGAGTTATCGGTTTCGGGCGAAGCGAAGGACAAGCCACGCCAGTTCAGCACAAAACAACATAAAAATATGAAAATTCAAAAACATATAAGAATAACTTCACGTATTACATTAGCTTTGTGTCGCGCAGGCAAAAAAATCAAACACTTAGCGTTGCCGCACAGGCAAATTAGCGCGATAATGCGCCCTAAATCAGCCCAAACTAACCGTTTGCAAAGAGCATCGCCCAAACGGGGTTCTAGCATGCTGATTTATAAAGGGAAAAATGGGGAGCT # Right flank : GCACAATGTGCTTAAAATGGACTCAATCCGCCGCTAGTTTGATGTAATCGGCTGAGAGGGAAGGTGGCGGTAGAAGCCGGTAAAAACCGGTAGAGTGAGGCGAGTGCACTGGAACACTGCGGCGCAATGTAATGTGCGAGCCGACAACCAGCGCGCGTTAAACGCTTGGCTCGCCACGGCTTTTTTCACGTACTTGTCAGCAGATCCAACCCGCAAATGGTAACCCGGCTTAAATCGCCAAACCTGATCGCCATCATCTCATCAAAGACGCTCTGTTCAACGAATTTCAGCGTCCATCAGGATCTCAGTTGCAATAAGCCTCTAATAAATGCTGCACTACAGCTGGCAAATCTAGGCAGAATTTATGAGCGCAGGCTGCTTGTCGTTACCAAACCAAATTGGGCAGCGGTAATGCTTCATTTTTGTGAGCGCCGCTGCGGCGAGCTACAACCTTATGAGCTTAACAGAGTAAACATCGTTCTCTCGCAAAGGTAGTTCCA # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAATCGACATTAGCCGCTAAGGCTGTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.50,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //