Array 1 455-1262 **** Predicted by CRISPRDetect 2.4 *** >NZ_NINQ01000309.1 Pseudomonas aeruginosa strain FFUP_PS_12 Contig_309, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 455 28 100.0 32 ............................ AATCGGGGCTTTCTTGATATCCGTCCAAGCCT 515 28 100.0 32 ............................ AGGCACGCATTGCCTTGAAAGGCGTTCTCTTC 575 28 100.0 32 ............................ TATGATCATGCCCCGTCCTCCGGCTCCAATAC 635 28 100.0 32 ............................ TGAAGGCCAACCCGCAAGTCAGCAAGGGCATC 695 28 100.0 32 ............................ AGGTTCGTGGCGGACCGGAAAGACCTCAACCG 755 28 100.0 32 ............................ CTGGACGCAAGCAAGATCGTAGGGCGCTGCCC 815 28 100.0 32 ............................ ACCACCAAGATGGTCCAGGCCGTGCGTTCGAT 875 28 100.0 32 ............................ GGCCAACCAGATCGTCTACACCGCCAACGTGA 935 28 100.0 32 ............................ TTGATGGGTTTGTACTCAGGCCCGGAAAACTC 995 28 100.0 32 ............................ ATCAAGGTCAACCTGGGCTCCGGCGCCGGCGG 1055 28 100.0 32 ............................ AGGTCTTCGAACTCGAACAGCTTCGCGAACTG 1115 28 100.0 32 ............................ TGTGTACCCCTGCGCGTGGAGCGCGGGGCGAC 1175 28 100.0 32 ............................ GTCATGGGCGAGCTCTACGCCAACCCGCAAGC 1235 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 14 28 100.0 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CCCCCCCGCTCTTGTTCGCCAACGCAAAGGTGCGCCGGAAGCGAAAATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTTCCCGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCCATCACAAGACCTTTCGCGCCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTAG # Right flank : ACTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATGCACGAAGTGAGGTTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAACAGCTTGAGCAGCAAACATGAAGCCCGCTCGAACGTCCCGTAGGGCGAATACCGCCACAGGCGGTATCCGCCGATGCCCCGGAGAGCCGGCGGATAACCGCAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //