Array 1 591-2096 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFKPW010000005.1 Bacteroides fragilis strain FJSWX11BF Scaffold5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 591 47 95.7 30 ..........A...C................................ AAATATTCCTGATTCAAACTTTTTAGTTGC 668 47 100.0 30 ............................................... TGCTTAAAGGCTATTCCATAAGTCAACGTA 745 47 100.0 30 ............................................... CGTTGTCATTTCATCCAGAAAATAGACGAA 822 47 100.0 30 ............................................... AGAATAGAAAACATCAGCTTGAGATGCAGC 899 47 100.0 29 ............................................... AAAGAGGCTAATTATCGGTTACCCGGCAT 975 47 100.0 30 ............................................... GATGCAGGAATTATTCGCGGTGAATTAATG 1052 47 100.0 30 ............................................... TCCTGCTCCCGGCACTTCCTTTGTGTTAAC 1129 47 100.0 30 ............................................... CAACTTCGTTTCCACATCTTCAGCCCACTC 1206 47 100.0 30 ............................................... GATGAAGATGTAGTTGACCTATATTCGTCT 1283 47 100.0 30 ............................................... CAACGCTGACCTGCAAGGCACCATCAACGG 1360 47 100.0 30 ............................................... ACTCAGATTCCAATGGTGACAGGTTTTTTA 1437 47 100.0 29 ............................................... GGATTCAGACCGTTTGCCGGATTGTTGTA 1513 47 100.0 30 ............................................... TATCCACGACTCCCAAGATTACGAGGATAA 1590 47 100.0 30 ............................................... AATCGGTTTCGAATAATACAAACGACACAG 1667 47 100.0 30 ............................................... CAACGAGCTTTAACAAGGTCTTGCGACCAG 1744 47 100.0 30 ............................................... TCAGACTCCGTATTAGTCTTACGAGCGTCA 1821 47 100.0 29 ............................................... CGCCCTCTGTCATTTCCCACCCTCCTTTG 1897 47 100.0 30 ............................................... TTAAAAGGGAATCATACTTAACATTAACCT 1974 47 100.0 29 ............................................... AACATCGCAAGAGTTAATAAGCCAATCTT 2050 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 20 47 99.8 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGT # Left flank : GGGAAAAGGGAGGACCAAGGAGACACATTATTATAATATATAGAGGGGGAATACTTGGAAAACAAGGAGGGGGGATTCATTGGGGAGGGAGAGGAAGAAGGTTTTTTAGTAGAATTGCGGAGAAAGATTGGGAATTTGGCGTTAACATTGTTAATGCGATTGAAAGGGGAATTTGTTTCAGGAGCGGAAATAACAAGGCTTTTGGATTGAAAAGACTTATTATTTGAAGATAAAGGACTTGATTTAATAGGGTGTTAAATCAAGTGATAGGAAAAGAAGAAACAAAAGGGAGAAATGGATTGAAAATGAAAGTAATAGAGGGACAATGAGTTATTTTTCGGAAAAAGGGATAAGTGGTGGACAGAAAGTGATAGTTGTGATTAGAACAAGTATGATTGTAGAGGATTTTTAAAGGAAAGGTTTAAAGTGGAAACGGAGGAGTACAATTACGAAAGACCATTGGAAATAGCATATGCTATCTGATGAAGACAAAGCGATGC # Right flank : TATATCCCGCATAATAAAATGGTTTTCAATAAGTTAAGAGTAAATCAGAAAAAAGAAAAAGAAGACTATTTCCAGCATAAAATCTCGTATTAATGCGAGATTTTGTTTTCTAGAACAACTCCAATTGCTGTCCCGGCGTATTGACATCTTGCACTTTCTTCCCATAAAAAAGTTCTATATCCCCAAATTGTTTATCTGTAATACACATGATTCCGACATGCCCAAATTCAGGGAGAAATGATTTAACTCTTTTTATATGTACTACTGCATTCTCGCTACTGGCACAGTGACGCACATAAATGGAAAACTGAAACATCGTAAAACCATCCTTTTGTAGATTCTTTCTGAAATCTGCATAAGCCTTTTTCTCTTTCTTCGTCTCAGTTGGCAAATCAAAAAGAACAAGCACCCACATAATACGATATTCATTAAAGCGATCCATAATCTATCGTTCGGGATAAGAAATTCTCCGAAGCTCTCCATTGAAACATTTATAAAGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.05 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //