Array 1 86928-87160 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALJR01000028.1 Selenomonas sp. FOBRC9 ctg120009541093, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 86928 33 100.0 33 ................................. GACAAGCTCCGCCCCCACGTGCGCAATGCACTC 86994 33 100.0 34 ................................. GGCAGAGCCGGAGCGGTTGGAAGAGCCGGAGCAG 87061 33 100.0 34 ................................. CATACGCCGCCCGGATTGGTTCGAACTCGCTCAA 87128 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ================================== ================== 4 33 100.0 34 GTCGCGCCGCGCATGCGGCGTGTGGATTGAAAC # Left flank : AATGTTTGAAAACAACGACTCATCGGCGCGTCTTAAGGGGACAATAGAGATGCGTCGACTTTATTTGGATCGAACACAACAATAAAACTGATGTCTTATCGACCGGAAAAGCGCATCGGGGTGTCACCGGGCATAAAAAGACGGCGTAGATTATGCGCTAGAGGGTATACTTAAACTGAGGGACAGATATAATGTGCGCCGAGCGACCGAGCCCTCCGGTAGAGAGCATCCTCTGCGGGCGGGTGAGGAGGAATGCCGATATACTGGGAATCTCTTTCTAGTAGTTTGGCAGATGAAGCGTTGGGAAAAACTGCTATAGGTTTTATTAGAGTAACTCTTTATGTGTGCGAAAGTGGAGTGAACAGGAAATACCGTAATAAATATAATAGGAATACCGTATCGAAGGAGGGCTGTGGGACAAAACGGTGAGAAAAAACATATTTGTGGCAAGTAATACCCACGAATATGTGGCAAAAGAAACCTTCCATGGAACCTTTTGC # Right flank : CCATCTGCAGGTTGGGGCGTTATTTGCTTCGCACGGTCGCGCGCCGACGAGTGCGTGGATTGGCACTTGTAGATTTGTCTACGATTTGCCTACAAAATCTTGCTTCACTTGACACAGTCACGCAGATTAAAATTCATGAGAACTTTTCAATTGATTTTGAAAATTTTATGGGAATAGCAATTGAAACACTTGTACCTTTGCGTTATGTATGATATACTATCGTCATATCCAAGATGAGGGCGCTTGTTTTTTGAGGCGGCGACGTTGCAACTTGTGTTGAATCGCGTGGATTGAAACATTGCCGATCCGTTGAGACCAAGAGCGAGAGTGTATCGTGTCGCCCTAACAACAGCATGGATTCAAACGATATTATAGAAACGACATTATTATAGGCAACAAGAACCGGAGTGTGGTAAGATTTGCTTCACGATATTCAAATCGGCAGATATTTACCGGGGGATTCGTTCCTGCACCGCATGGATGCGCGTGTAAAAATCCTC # Questionable array : NO Score: 8.86 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCGCGCATGCGGCGTGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCGCGCATGCGGCGTGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.80,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 100884-103914 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALJR01000028.1 Selenomonas sp. FOBRC9 ctg120009541093, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 100884 31 100.0 37 ............................... CCCCCTAATCAAATACCAATCTCAAGCCCTGCCTCGT 100952 31 100.0 36 ............................... CTCAAGCAGTACGGCAAATCTGTTGAAGAGGCGGGT 101019 31 100.0 36 ............................... CTCGCGATCGATAATTACGAAGCGGAGACGAAAGGT 101086 31 100.0 36 ............................... CCGTACCGCCGAGGCCGCCTAGTCCACCGAAACCGT 101153 31 100.0 36 ............................... ATTTTGTGTACCTTCCTTTCGCCCATATGGGCAAGT 101220 31 100.0 36 ............................... TAACTTGCAAAAACCTAAAAAAGCCTTATACTATGT 101287 31 100.0 36 ............................... TTTTCTTTCTTTTTCCGCGCGGCAGGAATAGGAAGT 101354 31 100.0 36 ............................... AAGATAGCCCCAATAATAGGGCTTTTCAACCCTTGT 101421 31 100.0 35 ............................... ATCACGGCGTGCTTGCAGTATGCGGCAGGAAATGT 101487 31 100.0 35 ............................... TGTCAACCTACCTCAAAAAGAAAACCCTGCCGAGT 101553 31 100.0 36 ............................... AATTCCTGCCTCATACAAGGCACAGAATCTAACTGT 101620 31 100.0 36 ............................... CAGCCCAAAAACACAACATATAGTAATATAGGGCGT 101687 31 100.0 36 ............................... TTAAAAAATATTATGGGAAGATGGTGTTAAACTCGT 101754 31 100.0 36 ............................... TCCCTGCGCCGCTGTCTATGATGCTGCCTATTATGT 101821 31 100.0 36 ............................... TTGATCCCTACAGCCCTTGATATTACTAGCTCTAGT 101888 31 100.0 35 ............................... TTGCGCGATCCTAGCCCTATATTACTATATGTTGT 101954 31 100.0 36 ............................... CATGCCAACTGTTTCCCTCTACCGCCGCCCGCTCGT 102021 31 100.0 36 ............................... TTGACGGCGTGCTTGCAGTACGTCGCACAGGATAGT 102088 31 100.0 35 ............................... ATCAACAATGAACATCTTGCAGCAAGATTCAAAGT 102154 31 100.0 35 ............................... TCTAAAGTCCTTATTTTGCCGCCCATATCTATCGT 102220 31 100.0 36 ............................... CTAAAATGTACCTATATATTACCACATAGCCCTAGT 102287 31 100.0 36 ............................... TCCTCCTCCGCCGCGTATGCCGTCCACGCCGCCTGT 102354 31 100.0 36 ............................... CCCTGCCACATGCAGGGCTAGATGATTGACTATGGT 102421 31 100.0 36 ............................... TAGAAAGATGCATGAATGCTATAAAATGGTACATGT 102488 31 100.0 36 ............................... CCTCTATTGCCGCCCGCTCTCTGTTGTAAACTGCGT 102555 31 100.0 35 ............................... TTCATGGTGTTTACCTCCTGCCCATATGGGCGCGT 102621 31 100.0 35 ............................... AACTCTGCAGGGATATAGTGGAGGATAGCGTTTGT 102687 31 100.0 36 ............................... CTTGACCAGCAATCCCCTTTGCGATCTCACCGAAGT 102754 31 100.0 37 ............................... TCTCCTTCCCCTGCACTAGGCAGGACTACAAAATCGT 102822 31 100.0 36 ............................... CTGCCGCCTGTGCATAGTATCCAATATAATGCATGT 102889 31 100.0 35 ............................... TTTACGGCTTGCAAAACAAGCCGTAAGAATTGCGT 102955 31 100.0 34 ............................... TCTTTTCCGCGCCAAAAACACAATATATAGTAGT 103020 31 100.0 34 ............................... ACTATGCATTTTTATTTTAGCCCCCTATTTTCGT 103085 31 100.0 35 ............................... CCTTTGGCACCTCTCCCGCCTCTTTTTTGGACGGT 103151 31 100.0 36 ............................... ATTGAGCGTGTCCCGTGAGGGACGCCCTGCCTCTGT 103218 31 100.0 36 ............................... CTAAACTAGATAATGAGGCACTGGACTATATCCCGT 103285 31 100.0 34 ............................... AACAAGTTCGGACAAGGTGTATTCTGTCCAGCGT 103350 31 100.0 36 ............................... ATTATGGGGACAAAGTCGCTTGGCGATGCCCTCGGT 103417 31 100.0 36 ............................... TGCCATTGCTGTCCTCACTACCCTGAGGCTAGGAGT 103484 31 100.0 36 ............................... CATGTAACAAGCATACTCATAGCTTGCTACATCTGT 103551 31 100.0 36 ............................... CGTTGTGTATCCCGAGAATGAGGTCTCAAAAGATGT 103618 31 100.0 35 ............................... GCAAAAAGGTATTGACGCGAAAATTGCTGTGTGGT 103684 31 100.0 35 ............................... CTACGGCGGGGTCGTCTTCTCCCGTCAAGCGGGGT 103750 31 100.0 36 ............................... ACCGATGCGGATGTGACCGAGCAAAACGAGGAGCGT 103817 31 100.0 36 ............................... TTCTCTTGAGAGAATCCAGTAAGACCGACGCCAAGT 103884 31 87.1 0 ....................C.C..CA.... | ========== ====== ====== ====== =============================== ===================================== ================== 46 31 99.7 36 CGCGCCCCGCACGGGGCGCGTGGATTGAAAC # Left flank : TCCGCCGTTCCTATGGAAGTAGGAGGGGAATGTCATGTATGTTTTGATTACCTACGATATCAAAACTGTCGATGTCGAAGGGCGGCGGCGCCTGCGCCAGGTTGCGCGGAAATGCCGCGCATATGGACAGCGCGTGCAGAATTCAGTCTTTGAGTGCAAAGTTGACCCAACACAGTGCAAACAGTTGGAACTTGCCCTGCTCGACATCATAGACCTGCAGGAAGACAGCCTTCGGTTTTATTTTCTCGGGAAGAATAAAGGGCCGAAGGTGAAGCATTACGGAACCAAAGAGTCTTACGACTTGGAGGCGGCCGTCATCATCTGAGCAGTTCTTTATGAGTGCGAAGGTGAAGTGAACAGAAAATAGCATGATAAAATATAGGCGGAAGAACCGTGCCAAAGGAGGGACGTGGGACGAACCGCCGAGAAAAATCGTATTTGTGGCGAGTAACACCCATAAATACGTGGCAAAAGGCTCCCTTTGTGGAACCGGTTGCGGT # Right flank : CAGCTCACAGTGTGTATGGAGACCCTTGCTGAGCCACAAGATGGAGCCGTTTTTCTTCGATGTGGGGCGCTCCTGCATTTTTGAGAGGATGGCTCAGATGACATAAAAGGGCTTGTTGCAGGAATACGTTTTTGCGTATCTGCAGCAAGCCCTGTTTGTATAAATTGGTTTCTTCAGAAGTCGAGTAATTTTGCTTTGTACTTACGATAGGCGCGTGTCTCGTATGCGCCGATTTGGGACTCGGGGTGATCCGCGCCGTAGGCGTGAGAGCTGACGGAGAGGATGGGCGGGGACTGGATGCGCTTGGCGACTGCCATGCCGGTATAGAGCCCCCACCAATGTTCGAGGTCGGCGATGAAATCCGTTGCCGTCGGGAAATATGCGGCGACAAGTCCCGCAGCGCAGCCGATATATTCTTCGAGCGTGTTTTTCGCATATGCCCGCAGGATGTCCTCGGGGAGACGGTTCTCCTCGGCAAAGGCGCGGAAGAGGTAGTCGTG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGCCCCGCACGGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.60,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.15,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //