Array 1 917530-915880 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP049075.1 Candidatus Campylobacter infans strain 19S00001 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 917529 37 100.0 36 ..................................... ATAAAAATACATTTTATGCCACGCGAGTTTAGCTCG 917456 37 100.0 38 ..................................... CAACCCGTCCCACAAAACCTACACACAGCCTTGTCCCA 917381 37 100.0 35 ..................................... TTTTGTAGCATCAAAGGCTGTTAAATCGTCTTTAA 917309 37 100.0 39 ..................................... CCCGAAAATTTTAAATAAAATGGGTGGTCTTTATACGCA 917233 37 100.0 36 ..................................... TCTTTGGCAGCGTGGAGCTCATCATAAACGAACACA 917160 37 100.0 36 ..................................... TTGTCATAAGCCTCCATAATTAAACCAATTTCGGCA 917087 37 100.0 35 ..................................... GAGCTTAAAAGCTCCCTAACTCGCGGGATTGAGTA 917015 37 100.0 38 ..................................... TCAAGAATTCGACTTCTTCTTCTGCTAGTTCATACAAA 916940 37 100.0 35 ..................................... ACAGCATAAACAATACTATTTAAAATAAATAAAAA 916868 37 97.3 35 A.................................... TATGCGGCCCATACCATTCGCCGCCACTTTTCCCA 916796 37 97.3 36 A.................................... CCAGCACATCCCGGCGAATTCGTTGTGGATTTTAAA 916723 37 97.3 37 A.................................... TAAAGTCCGGGACGATTATCAGGAATACCTAAACCAA 916649 37 97.3 38 A.................................... AATCAAATATCTAATCATCGCAAATAGCGTATTTGTTA 916574 37 97.3 36 ..T.................................. GCAGGATTTAGCAGAATTAGAGCAAGAATTGACACA 916501 37 97.3 35 ..T.................................. ATCAGTGCTAAATGAAATCACTAAAAACACGCAAG 916429 37 91.9 36 ..T...........T.........T............ TTGATGTATTCCAAGGCAATACAGAATTGAAAAGTT 916356 37 97.3 38 ..T.................................. AATCAAATATCTAATCATCGCAAATAGCGTATTTGTTA 916281 37 97.3 37 ..T.................................. CAAGATGATAGAGATAGAGGCAATATTTACAATTTCT 916207 37 97.3 36 ..T.................................. AAATTAGCGTTATATTCTTTTTGAGAGCCAAGATAA 916134 37 97.3 36 ..T.................................. AAAACTTCCACATCGGTGCCATTGATTGAGCCTGAA 916061 37 97.3 36 ..T.................................. AAATTAGCGTTATATTCTTTTTGAGAGCCAAGATAA 915988 37 97.3 35 ..T.................................. TTTATACCAAAAGAATTTAAAGAAACTTATTTATT 915916 37 91.9 0 ..T........C..............C.......... | ========== ====== ====== ====== ===================================== ======================================= ================== 23 37 97.9 36 GTCGCAAATTATATCACAAAACTACGTGGTTTGAAAC # Left flank : AAGCGCAGGTTCTAAAATGCAATTAATTGCGTATTCTAAACTAACTAGCGAGTTTTTCAATAAGCCATTTAATAAAATAATTTTATGCCACGGCAAGAATTTGAAATTTAAAATTTTTCAAATAAACCAAGCAGATATAGCAAATTTTAATAAAATTTTAGAGCAAATGAAAGTGATTTTAGAAAATGAAAATTTCCCAAATAGCTCAGCTAGCTTAGCAGCCTGCGCTCAATGTGAGTTTAGAAATTATTGTGATGATAGAGAATAAAATTTGGCTAAGTGTTAAACTTAGCCAATCACCCCGGTGACTATGCAGATACGGGGTCCGAACACACCTTATGGTGATTTCAAACGCTTTGTGGTTTTATAATATAATTTGCGATGGGATTGTAGCTAAATTTTCCACAAAACGCAATGTTTTTGCAGTTTTTTTTAAAGTGGAAAAAATCAGCATTTTACGATACCATCTAAGCCCCAAAATATCGATATTTTGTGAGGCT # Right flank : CGCGAGCTAAACTGAAACCCGCTGCCGATTTTTACTGAAATTCGCCCAAAAACACAGGCTAAAATCTCCCACTCATAGCCCGTTGATGATGCCGTAAATGGCGGGTAGTTAGGATTAATGCTAATTAGCTTTATATCGTTGTTTGGCAAAAACTCAACGCGCTTAATATAAATTATATTATCAAGCCTTACTAAATAAATCCCCGCGCGCTTTATATAGTTGCGATTTGCTAGCATTTCAATCATCATATAATCGCCATCGCTAAACTCAGGCTCCATACTATCGCCAAGACACCTAATTATTTTGGCGTATTTTGGCGAAATACTGCCTAAAAACTCGCTTGGCAGGGCAATTTGCGCCTCTACGCGAAAATCACTATCTAAATAGCCCTCCGTGCCAAAGCCTGCGACCATCTCAAAAACATCAATATTGTGAAAAGGTGCGCTATTTGTTGTGTCATTTATTGTGTAGCCACTAAGCTCAGCTAGGCTAATATTTAG # Questionable array : NO Score: 2.73 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.57, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAAATTATATCACAAAACTACGTGGTTTGAAAC # Alternate repeat : GTTGCAAATTATATCACAAAACTACGTGGTTTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.80,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //