Array 1 66321-69713 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFBX01000034.1 Acinetobacter baumannii strain B30 G-1206G0404-12-B30-contig_34, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 66321 30 96.7 30 .............................G ATGCATCAAGAACGAACTGTTGAAGATGTG 66381 30 100.0 30 .............................. TCACTAAAATATCTAACTCAGTTCTTAAAG 66441 30 96.7 30 .............................A TCGGTTAAAGATGCAAATGGTGAACAATCT 66501 30 93.3 30 ............................GC TTTGATCAGTAACTCAATGTATGAGTCATC 66561 30 100.0 30 .............................. ATCGAAAAATGGGAGTATAACCATGCATGA 66621 30 100.0 30 .............................. CGCAAAGATCATTAATCAAGGTCATGATGC 66681 30 96.7 30 .............................A AGAAATCAAAGACTTATCTGGTCAGGTTGA 66741 30 100.0 30 .............................. TGGTCAAAATCATTCACACAACCATTCACA 66801 30 96.7 30 .............................A TCGAAGAAAAGGACCGTCGGTTCTTAGTGC 66861 30 96.7 30 ............................T. CAGAATCACCGCATCGAGAACGTGTAATTA 66921 30 96.7 30 .............................A CATTCAATTTGATCAAACGGAATTCATGTT 66981 30 100.0 30 .............................. TAGATAATCATCACCCAGTATTAAATGTGG 67041 30 100.0 30 .............................. TGCGTTTTTGAAAGGTCGCCATTGTTTAAA 67101 30 93.3 30 ............................TC AAATGAACATTATTTGTGGTGAAAATGGGG 67161 30 96.7 30 ............................T. CTAAAAATTCAGGCTCATTACTAACGCCCT 67221 30 100.0 30 .............................. CTGCATTCTGAAGTGGAGTTTCTTCTAAAT 67281 30 96.7 30 ............................G. GAGTGTCGGTAGGAATTTCAATCCACCATC 67341 30 96.7 30 ............................T. GCCGCAATATCTCAGAAAAGCAAGATCAGT 67401 30 100.0 30 .............................. GATAGTATCTTGGGCGCAGGCAAAAGGAGC 67461 30 93.3 30 ............................GC CTTGTCGCTGCTCTTGCCGGATAATCGTTC 67521 30 96.7 30 ............................C. GCATGGATCTATTACGACATCTGTACAGTT 67581 30 93.3 30 ............................TC TTCCGTGTTAACAATTGCTTGAGCTATTGA 67641 30 93.3 30 ............................TA ATTGAAAATGCTCAATATGTAAAAGATTTT 67701 30 100.0 30 .............................. GGTGTAAACGACAATCTCTTAACCTTCCCC 67761 30 93.3 30 ............................TA AAGGTTCCTACTAACTACAATCCAGCAACA 67821 30 93.3 30 ............................TA ACGGTGCACGAACTGTTATTAGCGGCAAAA 67881 30 93.3 30 ............................TA CAGACCGAACACTTCTAAATAACTATGCCG 67941 30 96.7 30 ............................G. TACGTCTACGGTACGTGGTTAGCATGATTT 68001 30 93.3 30 ............................CC TGCCGTTAATTCACCGCTTGGGTGATAGAA 68061 30 93.3 30 ............................GC AGGGAAAAGTATAGCTTTAGATATATCCCA 68121 30 93.3 30 ............................TG TAAATATTCGTTTTTATTTTTTTAGGTCAT 68181 30 96.7 30 ............................T. GCTCTAAGCATTCCGAAGCAAGGAAATGTG 68241 30 100.0 31 .............................. CACATTTTGGGATGGCAATAGCATTATTTGT 68302 30 93.3 30 ............................TG ATCTTTGCAACCAAGCATTCAACGAATCCA 68362 30 96.7 31 .............................A TTTCATGCTTATGTGCTAAATTCATATTTCA 68423 30 96.7 30 ............................G. GTATTACCGTCATTTTTATGATGGTACATG 68483 30 96.7 30 .............................G TATCCGTTGCATTAATCGCTTTGGCTCAAA 68543 30 96.7 30 ............................G. GTTGTAATTTCGCTTGTATTGATCATTGCC 68603 30 96.7 30 .............................C ATACCCCATATAACGGTTATTGTAGTTGCT 68663 30 93.3 30 ............................TA TGATCTATACATTACAACAAGCAACACAAA 68723 30 93.3 30 ............................TC AATGTTATATCACATTAGATTAACAAAACA 68783 30 93.3 30 A............................C ATCGATGGCAGTTTCACTTTCTACTGCAGG 68843 30 93.3 30 ............................TC CAGAAGTGTCACCGCCACCCTTAACACCAG 68903 30 96.7 30 ............................G. CGGTCGAATGTCTGGGACTTTTTTGTTATA 68963 30 96.7 30 .............................A AGGCATACACCCAGTAGAAGATAAACAAAA 69023 30 100.0 30 .............................. ATATGTGCGTAACCGAGCAAGCTTGTCACG 69083 30 100.0 30 .............................. ACCGAAAGATGACAAAAAGCACCCTAAGGT 69143 30 96.7 30 .............................A GTGAAAAAAGCTGACAGCAAAATAAACTCA 69203 30 96.7 30 .............................C TTCATAGAAACCGGCTTTCGGAAAGTTATC 69263 30 96.7 30 ............................G. CCAAGTCTTAAAGATGTTCAATGGGCAATG 69323 30 96.7 30 .............................A TCGAATCAAAATATTAAAGAGTTACGTCAT 69383 30 96.7 30 .............................A TTCGTGTTGACCAGGAATTAAAAGACACTT 69443 30 96.7 30 ............................C. CAAAGTATTTAACACGGTTGTTAGCAGGAT 69503 30 93.3 30 ............................CA AAAAAGAGCTTGCATATACAGATTCTAGTA 69563 30 96.7 31 ............................T. GGTGTTGAACAATGCTTAAGTGAAATCACAA 69624 30 93.3 30 ............................TA TATCAATCTTGTTAAGAGAAGCCGCATCAT 69684 30 96.7 0 ............................G. | ========== ====== ====== ====== ============================== =============================== ================== 57 30 96.3 30 GTTCATGGCGGCATACGCCATTTAGAAAAT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TGATGTGTATGTTCTATTAGTGGTGTAAATCGTTCATGGCGGCATACGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATACGCCATTTAGAAATAATACACCAATCCCGCTTAGAACTTGTAAATGTTCATGGCGGCATACGCCATTTAGAAAGCAATCTGGTTATCCGATTCCTATTTATTTTGGTTCATGGCGGCATACGCCATTTAGAAAATCATCATTGCAGTCTTATAAGAGCCAGGCTGGTTCATGGCGGCATACGCCATTTAGAAAAAACTGCATAGATGACCATTAGAGACATCCCCGTTCATGGCGGCATACGCCATTTAGAAAGTAGTGGGGACATTGTGTACGCTCATGATGTTGTTCATGGCGGCATACGCCATTTAGAAATCATGCCAGT # Questionable array : NO Score: 5.33 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.26, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 69935-73990 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFBX01000034.1 Acinetobacter baumannii strain B30 G-1206G0404-12-B30-contig_34, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 69935 30 93.3 30 ............................GC AATCTGGTTATCCGATTCCTATTTATTTTG 69995 30 96.7 30 ............................A. CATCATTGCAGTCTTATAAGAGCCAGGCTG 70055 30 93.3 30 ............................AA ACTGCATAGATGACCATTAGAGACATCCCC 70115 30 96.7 30 ............................G. AGTGGGGACATTGTGTACGCTCATGATGTT 70175 30 96.7 30 .............................C ATGCCAGTTGCAAAGTCCAAGCCCACTGCT 70235 30 96.7 30 .............................A CTAACTGTAAAACAGAAGACTTGCCAACTT 70295 30 93.3 30 ............................GG TTTAAGTCCCCGAACATTACATAAGTAAAT 70355 30 93.3 30 ............................AA TGGCATTTGCTGCTGACGGGGATTTCGACT 70415 30 93.3 30 ............................AA ATCAAAATCGTGGCAGATAACAAAGCGATC 70475 30 96.7 31 .............................A ATCTCGGTATTTACGCCAAGGGCGCTATTCA 70536 30 96.7 30 ............................A. GATCTACCCTTTGAGCTAGATAAAACTTTT 70596 30 100.0 30 .............................. CACGTGGTACGCGCTGTAAGCCTGTTTGTT 70656 30 96.7 30 .............................G AGTATCGCAAATCAAACATTGCCAAGCTTT 70716 30 100.0 30 .............................. AGATAAAGCAGGGGATAAAGGGACGTTAGC 70776 30 96.7 30 .............................G TAATACTAGAATCTGTATATGCCAGCTCTT 70836 30 93.3 30 ............................CA TTTTGCGACGCGCTGCATCGTTTAGGGATA 70896 30 96.7 30 ............................G. GTCGGGTAAAACAAGGGTAATGACTTGTGT 70956 30 96.7 30 .............................C TACAAAGGCAATCTGGCTCTTCAATTCGTG 71016 30 96.7 30 .............................G ATTGCGGACATTTAGTCTGCTGTATTTCTT 71076 30 96.7 30 ............................A. CGTGATCAAACCACATGCCTTCATCTTCAT 71136 30 93.3 30 ............................AC TTTAAGCGCAAACGAACAGCATCAAGATCA 71196 30 96.7 30 .............................G TTTCATCTGTCTTGATAGCTTCCCCCATAA 71256 30 93.3 30 ............................CA CTACGGACATAATCGAACATTTCCTGAAGT 71316 30 100.0 30 .............................. GTGCGAGTGTCTACGAGCCAAGCCGAAATA 71376 30 93.3 30 ............................AG TTGCTACTGAATTAGTTGTTATTGCTAAAA 71436 30 100.0 30 .............................. AGGCTGTGCTAGGTATTCGTCTGGTTCCAT 71496 30 96.7 30 ............................A. TAATATAGCTTCTTCCAACTACAATATATT 71556 30 96.7 30 .............................A TTTGCTACGCCACCAGCCATACCTAGAAGC 71616 30 93.3 30 ............................AA TAGAATTAAAACCACGTTGATAATATAGGT 71676 30 93.3 30 ............................AA CGTCAATTCAAACGTAAAAAGCTACTGAAG 71736 30 96.7 30 ............................G. CAGTATTACTCCACACTTTTTATATTTCAC 71796 30 96.7 30 .............................G TACCTCATCAATAAAAATAACTGATGTTTC 71856 30 96.7 30 ............................A. AAAATCAACCCGTATTAATACCGAATGCAC 71916 30 96.7 30 .............................A ATAAAGAGGTTTTTAACTGGTATGAATCGA 71976 30 96.7 30 ............................C. CATGACGATGCTTTTCTAACAAAGTCATCC 72036 30 96.7 30 .............................G AAAAACGTAACGCTGAATTGCAGGCTAAAA 72096 30 93.3 30 ............................CA GCTAATAAATTTACAAGAATCTGATGTGTA 72156 30 93.3 30 ............................AA CTGAAGTGAAAATTGTTCATTAATGGTTAT 72216 30 96.7 30 .............................C ATAGTTAATATAAATTTATTATGACAAAAA 72276 30 100.0 30 .............................. AGCCGTTTGGACTTTACCAATCTATATTTA 72336 30 93.3 30 ............................AG CAATATCAATTACAGGAATACCACCAGCAT 72396 30 93.3 30 ............................AA TAGAATTAAAACCACGTTGATAATATAGGT 72456 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 72516 30 96.7 30 .............................G ATGCGGGTTGTCCACCAGTTATGACTACTT 72576 30 93.3 30 ............................CC AAGCTGTGAATGTTGGTAATGCTTTAAGCG 72636 30 93.3 30 ............................CG TCAAAACAATCAAAAAAGCAATGAGTACAA 72696 30 93.3 30 ............................AG TGAATGGGATTTATTCGCAAGGTGATATTA 72756 30 93.3 31 ............................AA AAAGTTTTTTTGACAATCAAGCCGGCAAGTT 72817 30 96.7 31 .............................G CATCGAAGTCATAGAACGCTTTGAGTTTCCA 72878 30 93.3 31 ............................AG CGACTTTGAATTGATGCCATCTCCGCCTTTA 72939 30 96.7 30 .............................A TTCAGATTGGCTGCGGCCTCACCTGTAGCA 72999 30 93.3 30 ............................GC AAGTGTCACCTTTAAGTGCACGGAAGAAAT 73059 30 96.7 30 .............................C CATTCTCGCTAAGTGGCATCACACGCGATG 73119 30 100.0 30 .............................. GGTTGTTTAGTAAGTTCAAAGCCCGTTGTA 73179 30 93.3 30 ............................CA ATGGATTTAAAGATTTCAACCGCTTGGGAG 73239 30 96.7 30 ............................A. CATCGAAATTTAGTTCTAATTCTTTAATTT 73299 30 96.7 30 .............................C ACTTCTCTTAATTAGTGCTGAAGAATCAAA 73359 30 96.7 31 ............................C. GAATAAGTGAGATGTCTCTATGAGTTCAATT 73420 30 96.7 30 ............................A. TGAATTAATACGGCTTACTGCAATTGGTTG 73480 30 93.3 30 ............................AG TCTTTAATGTCGGCAACATGCTGTGCAAAA 73540 30 96.7 31 ............................G. AAAAAAGAACATTTCCAGCAAAAATTGACGA 73601 30 100.0 30 .............................. GCTGCCTGCAAACTTGTTTGGGGCTTTATG 73661 30 93.3 30 ............................AC TGGAATTCAGCAGTAAATAAGGGGTTAAGA 73721 30 100.0 30 .............................. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 73781 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 73841 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 73901 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 73961 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 68 30 95.1 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : AGACACTTGTTCATGGCGGCATACGCCATTTAGAAACTCAAAGTATTTAACACGGTTGTTAGCAGGATGTTCATGGCGGCATACGCCATTTAGAAACAAAAAAGAGCTTGCATATACAGATTCTAGTAGTTCATGGCGGCATACGCCATTTAGAAATTGGTGTTGAACAATGCTTAAGTGAAATCACAAGTTCATGGCGGCATACGCCATTTAGAAATATATCAATCTTGTTAAGAGAAGCCGCATCATGTTCATGGCGGCATACGCCATTTAGAAAGTGATGTGTATGTTCTATTAGTGGTGTAAATCGTTCATGGCGGCATACGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATACGCCATTTAGAAATAATACACCAATCCCGCTTAGAACTTGTAAAT # Right flank : TAAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.14, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //