Array 1 17927-16679 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CAJDYV010000032.1 Corynebacterium diphtheriae isolate YEM0054, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     17926	    29	 100.0	    32	.............................	GGAAAAGCAGCCATGGCTCGTCCAGATGAACA	
     17865	    29	  96.6	    32	............................G	CGCGTCACCTTAAGCTCCTCCTCATCGAGGTT	
     17804	    29	  96.6	    32	............................G	ACGGGTGGTGTGGGGTATTTTTTTCACCCCAC	
     17743	    29	 100.0	    31	.............................	ACCACATTGCCCTCATAACTGGATTGCTCTA 	
     17682	    29	  96.6	    32	............................G	GTTAGTTCCGCCCAGTCTCGTCACCCCACGCC	
     17621	    29	 100.0	    32	.............................	GCTAGACCACCGCCCGTGTTGTAGATGCGGAG	
     17560	    29	  96.6	    32	............................G	CCCTAGGATCTCACTCTTGTTGTGGGTGTGTG	
     17499	    29	 100.0	    31	.............................	CGCAAAGATCGCTAAATCTAAGGCGCTGACC 	
     17438	    29	  96.6	    32	............................G	CTCCGTCTCGAACTGGCGTTTTAGCCCGCGAA	
     17377	    29	 100.0	    32	.............................	CGGCCGGTCAAGGGGGCTCCAAGCTCCCTCGC	
     17316	    29	 100.0	    31	.............................	GGGGTATTATCGCGGTCGATTCGGCGGCACA 	
     17255	    29	  96.6	    32	............................G	GTCATGGTGGTGAAGGAAGCTCGTCGAGACGG	
     17194	    29	  96.6	    32	............................G	TGAGTTTCTGTAGATCAATATCCATATGTTTT	
     17133	    29	 100.0	    32	.............................	ATCGGCCGGTAGTGGGTCGCCTTCCGCGCCCC	
     17072	    29	 100.0	    32	.............................	AGCTTGACTTCCGCCAAATCGTCGGGAAGCTT	
     17011	    29	 100.0	    32	.............................	ACCGCAGCACCCGGCGCGATATCCGCCGTGAA	
     16950	    29	 100.0	    32	.............................	ATCGGCCGGTAGTGGGTCGCCTTCCGCGCCCC	
     16889	    29	 100.0	    32	.............................	AGCTTGACTTCCGCCAAATCGTCGGGAAGCTT	
     16828	    29	 100.0	    32	.............................	AGATCGTTAAACCAATCTGCTTGCTTTGCGGA	
     16767	    29	  96.6	    32	............................G	ACGACCGTGGGAACCGCGAGGATAAATAGCAG	
     16706	    28	  96.6	     0	........-....................	|                               	
==========	======	======	======	=============================	================================	==================
        21	    29	  98.5	    32	GTTTTCCCCGCACCAGCGGGGATGAGCCC	                                	       

# Left flank :   CTTACTTGGAAAGAAGCTGAGGCATTGGCTGGAAACACAGTGCGCCTGCCAGCCCGAATGACACGCAGAGATTCGGATTTTAATGCCGTTATTGATTCGCTCGAAGCACAAACACCACCAGAATGGCAACGATCCGGTTTGCTTAAAGGCCAAGTTGCGTTGCTTTTCGACGAAAGAGGAGAGGCTCGTGTAGGTCGATTCCTAGTGCGTTATACCAATGAACGTGGATTAGAGGTGGAGGTCTGCCCAAAGGAAGACGCGTAAAAGGAAACCCCGCTGGTGCGGGGAAGTATGCCTATGTAAATCTTGTAGAGATATTAAAAAGGCTCATCCCTGATCGCAGGGAACAATGCCAGCCTATGGCTAGAAGAAAGGACTAAGCAAATTTGGGTGAATGGCTGATCCTAAAACAGTAGAAATAAAGATGAAGCAGAAAAATTGCTGAAACAAAGTTATATGTAATAAGCTCTAACTGGCTCTAAACGTGCAGCTTGATAAGT
# Right flank :  AGGGACTTTGAGAACTGGACCGCCGTGATTCCTTGCACTAGCAGGGTGGATGAATCTTTGTTGAAGAACGGGTTTTGGAATCTGTGTTTTTCATTCAGAGAAATCAGTAAATGATGGGTCTACTAAAAAATTTTGAAAAAATTAACTTTTAATATCTATAAGGTGTATTCTGTGGAGAAAGTGCTTCCTAAGTTGGGAGTTTTAAAACAATCAGGAAGGAGTTGGTGGTGGCTTCGTTACTGGAGATCCGCTGGATTCTGGCTCTTGATACTCAAGGTAACCAGATTTCAGTTGGAATACGAGATATTTTCGCGGGGGAGGTGCAGGTTGCCTATATTCAGGGGGAGTCCCCAGCTCAAGACTATGCTGTGATGCGGCTTTTGCTGGGTATTTTCTGGCGTGCCCATTCCATGGATATCGACATGGACGTGGAACCTTTTGATTTTCTTGAATGGTTCAACAAGATGAGACGTCAGCTTGCTCGAAAAGGGAAAGATCAG

# Questionable array : NO	 Score: 6.16
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.97,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTCCCCGCACCAGCGGGGATGAGCCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGCTCCCCGCGCCAGCGGGGATGAGCCG with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-12.70,-12.70] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [48.3-63.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.18   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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