Array 1 136924-138478 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP085939.1 Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 136924 36 100.0 30 .................................... TATACTGTTTTAATCCTCACACTCAAAGTT 136990 36 100.0 30 .................................... ACTAGCGTTAGAGCACGCACTACAGCATAT 137056 36 100.0 30 .................................... CTCAAAATGTGTCTTACCATACAGCGCAAT 137122 36 100.0 30 .................................... ATTCCCGCGAGGAATATAAGTAATTCTCAA 137188 36 100.0 30 .................................... ACGGCGAGACCATGAGTGGTAAGTCTTATC 137254 36 100.0 30 .................................... TGATAAAGAAAGATAGGAGGTGAGTATCAT 137320 36 100.0 30 .................................... GCTTCTACTAATTGTTCATTCAAAGCGTCA 137386 36 100.0 30 .................................... TAATCAAAACATCCAGCAACCAAGGCGACA 137452 36 100.0 30 .................................... TGCTATCTTTCTGCTATAATAAAAGCAGAA 137518 36 100.0 30 .................................... ATTCTTCTTCAAAGCTCGACGAATGAGCTT 137584 36 100.0 30 .................................... TTGGCGGGCGCGTTTGTCAATCACTTAGAT 137650 36 100.0 30 .................................... AAAATAAGGTTTTGAATTTTCTTCTTCTTC 137716 36 100.0 30 .................................... AATTTTTAGCCCCTCCATTTCCTCGACAAA 137782 36 100.0 30 .................................... TAAAGGGGAACGTGTTGACGTTCGTGGTAT 137848 36 100.0 30 .................................... GTCCTAGCTCAAAATCTCTGAAACTCCTAT 137914 36 100.0 30 .................................... AATTTTTAGCCCCCCCATTTCCTCGACAAT 137980 36 100.0 30 .................................... CTCCTGTTTTGCGCCCTTGGTTGCTGATAT 138046 36 100.0 30 .................................... CCCAATATTCGCTTTAAATTGTTCTGTCAT 138112 36 100.0 30 .................................... GAAACTGGTCGATTATTGGGTAGTCCCTTA 138178 36 100.0 31 .................................... AAGTCGGCAAGTGATGATGAGTTGCAAAGAA 138245 36 100.0 30 .................................... TAAAGGAATGTTGAAAGAACCATTTTATAA 138311 36 100.0 30 .................................... CAATCAGATTATTAAATTCCCCTAATTTGG 138377 36 100.0 30 .................................... ATTATTTAGGATCAAAGCGAAGGTTGCATT 138443 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 24 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : ACAGTTGAATGAAAAGTCTGAAGTGAAATCTATGTTAGAAAAATTAGTTGCAACTATTACAGAACTAATTGCTTTTGAATGTTTAGAAAACGAGCTGGATTTAGAGTATGATGAAATAACAATTTTGGAATTGATTGATGCTTTAGGTGTAAAAATTGAAACACTAAGTGACACTGTTTTTGAGAAAAGTTTAGAGATTGTTCAGGTGTTTAAATATCTTTCTAAAAAGAAACTGCTTGTCTTTGTGAATGTATCATGTTATCTGTCTGAACATGAACTAGCTAAATTGGTAGAATATATTCAACTTCATAATATAAATGTACTGTTTGTTGAACCAAGAAAAGTATACGACTTCCCTCAATATGTAGTGGATGAGGACTATTTCTTATCTTGTGAGAATATGATATAATATTAGTAAATATAAGGAATCATTTGAGCTGAAGTCTAGCTGGGACGAATGGCGCGATTACGAAATTTCGAGACAAAAATTGGTCCACGAG # Right flank : CACAATACATTTTAATCATAGGGCTTGCAAATTTTTCCAATCGTGTTATAATACTTTTTAGAGACATATCACCTACAGGAAATCTTTCAGAGAGCGTGTGGAGCTGGGAATCACGCAGAGGATGTAGCTGGGACTACTCGATTTATTTTTATGCAAACATAAAACGGTGGCTACGTTAGAGCCAATCAGAGGTGTCAACAAACTTTTTTGTTGTACATGAATGAAGGTGGAACCACGTTGCGACGTCCTTTTAGGATTGCCGCTTTTTATTTTGTCGGAAGGAGGAAGAGTTATGCTCTATATGATTGGTGGATCGCCTTGCAGTGGGAAGTCAACAATTGCCTCCCTTCTTACTCAGCAGTATGGGCTGCTTCATATCAAGTTAGATGATTTGACAGACCAGATGATGGATCAAGCAAGAGCGAACGCAAAGCCGATTTCCCTTCTGAGACAGGACAGAAGTCCGGATCAAATCTGGCTGAGACATCCAGAGGAGATGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //