Array 1 297742-296317 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMOU010000002.1 Bacteroides sp. D55t1_190419_B8 NODE_2_length_401125_cov_23.8714, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 297741 47 91.5 30 A.........A....T.........A..................... TCCATTTGGAAATTAGGAGTTATAGCTAAT 297664 47 100.0 30 ............................................... TTTGCTGTGAGTATATAGAGGATTGTGTAA 297587 47 100.0 29 ............................................... CCTAGCAGGTAGAGGTGTAACAAAAGGAC 297511 47 100.0 30 ............................................... CGCTATGGAGTTGATATAGTATTCACGCCT 297434 47 100.0 29 ............................................... AGAACTCAAACGAGCCGGAGTAGACTATA 297358 47 100.0 29 ............................................... CGTCTCCATGTGGGACAAACTTCCCAGTA 297282 47 100.0 30 ............................................... TATTGGTAAAAATACCATTGGAGACAATAA 297205 47 100.0 29 ............................................... TTTTTAATCTCATTAAGTAGTTTTCTACT 297129 47 100.0 30 ............................................... GTACAGACGCCTAACCCGTATGCTTATTGC 297052 47 100.0 30 ............................................... GGGGCTCGAAATATTCGAGGATACGATACT 296975 47 100.0 29 ............................................... TCTTGCTTGTCGTAAATTGGCGCAGGATA 296899 47 100.0 29 ............................................... CGTAATACTAGGGCTAGCAGACATTGCAG 296823 47 100.0 29 ............................................... TTAGATAGTTCATTGGTACGTGGAAAATT 296747 47 100.0 29 ............................................... TTTTAAAGTGTTACCAACTTCACACGAAG 296671 47 100.0 30 ............................................... CATCACAGATTGCAGCACAAGCTGATGCGC 296594 47 100.0 30 ............................................... TAGACAAAGTAATTGAAGAACTTGAAAGCA 296517 47 100.0 30 ............................................... ATTACGCACGGTGTTGGAATACCCGTTGGA 296440 47 100.0 30 ............................................... ACCCCGATTATATAGAGGGCTTGAAAACCA 296363 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 19 47 99.6 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAAT # Left flank : AGGATCTCCTAGATGTTTTGTTATAATCTTATACTGTTTCATCGTCAGATAACGATGATTATACGGCATATAACCGGTCGGTACAAGCTCTTTGGTCAACGGGTTACAGTCTTTAATCCATCGGCTCAGACAACGCACTGCATTTTTACTGGTCGTACATCTGGGGAAGTACAATGCAGCTAATACAGCAAAAGATAAGATTCGTCTCATTTCGTTTTTAAAGTTTTAATTTATCGTTTCATTGTTTCTTTCGTACTACAAATATACAACATCAAAAAGCGTTTGTCAAGTCATTTGGGATTTTATCGTTAATATAAAGGAATACCCACCTTTATTAACCCAATTACTAAGCAATTGAAACAGATTGAGTATTCTCAATATTTAACACTAGAATTAAGTCTAATGCTCACAAAAGGAAACTTAAAAATACTTATACGAAAATGACAATCTTTAAATCACAAGAAATAACATGTTTATATTAAAAAGAGATGCATGAATGG # Right flank : ACATTTCGTATAATAAAATGTAATTCAATTAGTTACAAAGAAGATTAGAAAAGAAAAAAGAAGACTGTTTCCAACACAAGATCTCGCATTAATGCGAGATTTTGTGTTCTAAAACAATTCCAATTGCTGCCCTGGTGTATTAACACTCTGCGCCTTCTTTCCATAGAAAAGTTCTATGTCCCCAAATTGTTTATCCGTAATACACATGACTCCGACATGCCCTAGTTCCGGAAGGAAAGATTTAACTCTTTTTATATGTACTGCTGCATTCTCGCTACTAGCACAGTGACGCACATAAATGGAAAACTGAAACATCGTAAAACCATCTTTTTGCAGATTCTTTCTGAAATCCGCATAAGCCTTCTTTTCCTTCTTCGTTTCAGTTGGCAAATCAAAAAGAACGAGCACCCACATTATACGATATTCACTAAGACGATCCATTACCGTTCGGGATAGGCAACTCGACGAAGCTCTCCATTGAAACATTTATAAAGTGAGGC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //