Array 1 1043346-1053098 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFRZ01000001.1 Acinetobacter junii strain NCTC10307, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 1043346 30 93.3 30 ............................AG TCAAACCAATCAGATACTTTTTGCCAAAAT 1043406 30 93.3 30 ............................AA GTGGGAAACCATCTGCGTTGTATGTAGCAA 1043466 30 96.7 30 .............................G TAGATTGAAGAATTGTATTGTCGTAATTGG 1043526 30 96.7 30 ............................A. TAAAAGAACCGCTTACATAGCCTGAGCCGC 1043586 30 96.7 30 ............................A. AATGAATCGCTAAGAGACTCTAAGCCAATT 1043646 30 100.0 30 .............................. GCGACCCCTGCGCACAGCTTCGGGGACTCG 1043706 30 96.7 30 .............................G ATCCAGATACACCTGACGACCCTAATAACT 1043766 30 93.3 30 ............................AC AACCAAAAACAACATAAGTCTATATATATC 1043826 30 100.0 30 .............................. GAGGTGTTGTTCTCCAGTCGCAGTCTGGAG 1043886 30 100.0 30 .............................. GAGGTGTTGTTCTCCAGTCGCAGTCTGGAG 1043946 30 100.0 30 .............................. GCCAAGAATCCAAACGGCAAAGTTATTCCA 1044006 30 96.7 30 .............................A AAAGCGACTAAAAAAAGATCAAAATCTTAT 1044066 30 96.7 30 ............................G. TTTCTAATGCCGTCCTACGTCTTGAGGCAC 1044126 30 100.0 30 .............................. GATCTCAACGTATGGCGTGGCGTTCATTGT 1044186 30 96.7 30 .............................G CTTTCGGCTTTGGAATCTTGACGGGTAAGG 1044246 30 93.3 30 ............................AC GTATATTTTCCGCTTGCCACACCAGAACAT 1044306 30 96.7 30 .............................G ACTCCAAAAAGTTTTTTGCAATTTGCTCTG 1044366 30 96.7 30 ............................G. TGAACTCTACAACATCAAACGCTTTTTAAT 1044426 30 93.3 30 ............................AC GCACAGAAGGGATCAGAATGTCCCATGAGG 1044486 30 93.3 30 ............................CG AGTAAAAAGAGTTAAAGGAGATAGTAGTGC 1044546 30 100.0 30 .............................. CGTTAAACTGACTAGGTTTTGCTTTTTCGA 1044606 30 96.7 30 .............................G ATACCATATCAATTCTCCAGGCAGTATTTG 1044666 30 93.3 30 ............................AC TCTTGAATCAGGTATCAAAATAGAAATTTC 1044726 30 93.3 30 ............................AA TGGGTCGCAACCAATACAAACGTTGTGAAT 1044786 30 96.7 30 ............................A. CGGCTTTTGAGTAGACTTTCATAAAAAAAC 1044846 30 93.3 30 ............................AG TGAGATAGAGATGTTATCCAGACTGATGTA 1044906 30 100.0 30 .............................. TAACTTTGCTAGTTCCGCTTGGGGTTATAA 1044966 30 93.3 30 ............................AA GAATAGCCATTCTTCCCGCAGTTTCGCTCT 1045026 30 96.7 30 .............................A AGCAGCAAAGGTTTGTCGAAGAATATCTGA 1045086 30 100.0 30 .............................. GTACAAGGCAAATGCTAAATTCATGCTATA 1045146 30 96.7 31 .............................A ACTGCCAGGATGAACCCCCTACTCACTGGAT 1045207 30 96.7 30 ............................A. TTTGAATTGATCATCGCTCAACCCAAACAG 1045267 30 96.7 30 ............................A. TGAAGTTATTCAGCCAAATAACAAGCTCTA 1045327 30 93.3 30 ............................GC CCAAAATACCTTTGAACGAAGTTTCTCTTG 1045387 30 93.3 30 ............................AA TTAAAGCAAGGTTAGAGCTTGAATTGATGT 1045447 30 93.3 30 ............................GC TCCTTGAAGAATCTATTTTTAGGATTGAAA 1045507 30 100.0 30 .............................. CAAATTGAGGGGCAACGTAAGAGTTGAATT 1045567 30 96.7 30 .............................G GGTAATTTCACCTGGTGTGATACCTGGGTA 1045627 30 93.3 30 ............................CA AGCAATATCATCATCATGGACTTCTTTTAA 1045687 30 93.3 30 ............................AA ATTGAACTTTGACGATATCGAGAGCTTTAT 1045747 30 100.0 30 .............................. CTGTAAAGCTTCATACTCAAGTGGACTTAA 1045807 30 96.7 30 .............................G AACCAGGTCTTCCACCGATCACGCAAAAAT 1045867 30 93.3 30 ............................AG CAAGCTACTCCAACTCAATCAACAAAAGAG 1045927 30 96.7 30 ............................A. AAGGATGATTCGGAGTTGCTGGAGTGGGCA 1045987 30 93.3 30 ............................AA CTTAACACACCATTGACCACGCTAGATATT 1046047 30 100.0 30 .............................. GTAACGCCTGCCTGTTAAAACGCTTTCTTC 1046107 30 93.3 30 ............................AC AGGGGAAATGACGAAATTGATAATCTTATG 1046167 30 100.0 30 .............................. TCAGTCCATAGTTAGGGTGGTTTTTACCAC 1046227 30 93.3 30 ............................AA TGGTGGTGCATGGCAGATGATTAAAGTAAG 1046287 30 93.3 30 ............................AA GGGGGTATCTGATTTAATTGTGATTGGAAA 1046347 30 100.0 30 .............................. TCCCGACAAAAGCCTGATCAATGTCAACTT 1046407 30 100.0 30 .............................. TCGCGTATCTAGCCTTAGCCTTATCAGATA 1046467 30 93.3 30 ............................GC CGTGAAAGGGCGACGCTCCAGAGTTCGATT 1046527 30 96.7 30 .............................A TCACGTCGCTAGCGTGCGAGGACGAGGAGC 1046587 30 100.0 30 .............................. ATTACTCTCACACAGCTAATGGCATGTGCT 1046647 30 93.3 30 ............................AA TTGCAGTTCCAGTTGATAAATCCATTGGGA 1046707 30 96.7 30 ............................A. CTGGGAGATCACGCCAATCGAAAGGCTTGT 1046767 30 96.7 30 .............................A AAATATGGTGTGCCAGTCGGTAGGCTTTCC 1046827 30 96.7 30 .............................C CCATTGTGATTGAGTGAGAGCATGGCTTTC 1046887 30 96.7 30 .............................A GTGTTACTGACGTAGACGATGCGAATGCCC 1046947 30 93.3 30 ............................AA CACCAATAGAATCATAAACGATTAGCGCGT 1047007 30 93.3 30 ............................AC TCAAAGAGAATTCTATTTATAGAGGCAAGT 1047067 30 96.7 30 .............................A CCCAGTATTCAAGTACTGGCATGGCAGCTG 1047127 30 96.7 30 .............................A GACAAAACCTGATATTTGATCCAAAGCAAA 1047187 30 93.3 30 ............................GC CACAAAGAGCGAAACGCCCATGCAAGGTGA 1047247 30 93.3 30 ............................AA TAAAAGAACGCGCTCCTGATGTTTTACCAT 1047307 30 96.7 30 .............................G AAAAGATTGAAGTTGAAATCATGGTTAAAG 1047367 30 100.0 30 .............................. TGGCTGTTGATACGGGGCAAGGGGGTAGTA 1047427 30 100.0 30 .............................. TGGGTGAAGTTGCAGAAAATGGTGTGCTCC 1047487 30 93.3 30 ............................AG TCGCATTAGCATTTGTGGCCAATAACATTC 1047547 30 93.3 30 ............................GA TCAAAAAGAAACAACCGCCTGTACGTCCAC 1047607 30 93.3 30 ............................AC ATTAAAGGCTATGGAAAGATCATCTGTCGA 1047667 30 96.7 30 ............................A. TTGTTACTATAGAGATATTGTGTTCAAAAA 1047727 30 96.7 30 ............................A. AATAACTACGGTTATGAAGATTATGAGTTT 1047787 30 96.7 30 .............................G AGTGCGAAGATGATTCAAAGCGATTCATGC 1047847 30 96.7 30 ............................A. TCGGTGCCAATACACCGCCAACCCATTTAC 1047907 30 93.3 30 ............................CA CCCAAAAACCAGTTGCATTACTTGAATACC 1047967 30 96.7 30 ............................A. AGGGCGACTGGATATAGTCATCCTGATGTT 1048027 30 96.7 30 ............................A. TAGCTTTTTAAGTCCATCAATTTTTTCTGG 1048087 30 96.7 30 .............................A AAGAAAAGCGCAGAACTCAATGAATACAGC 1048147 30 100.0 30 .............................. ACAGAACTGGTGAGGGCTGGATTGCTGAAA 1048207 30 96.7 30 ............................G. TGGCAAGTTTTCAAACATATCAATATCAAG 1048267 30 100.0 30 .............................. CGTTAAACAAATAGTACACACCGCTAAACA 1048327 30 100.0 30 .............................. GAGTACAAACATTCCCATCTTCAACGAATA 1048387 30 93.3 30 ............................AC TCGGAAATAAATTCTGAATGTTGTCCGTAT 1048447 30 96.7 30 .............................G TAGCGCCGTGTTTGATAAGAATTGGTTTTC 1048507 30 96.7 30 .............................A AAATATCGGGGTTGATGTTGAGGCCAGCTT 1048567 30 93.3 30 ............................AC GGCGCAAGCGAGAACGTTAAGCGACTTGTC 1048627 30 96.7 30 .............................G AGTACAAGGCGACGTACCCAACCGATGAGG 1048687 30 100.0 30 .............................. GAAAAGCAGCTAAACATGACTGCTTTCATC 1048747 30 93.3 30 ............................CG TGGAATGCGTGACATGCAGGAGGACATCAA 1048807 30 96.7 30 .............................G ATCGTGCGGATGAGGTTGTAACTGGTTCGA 1048867 30 100.0 30 .............................. CCACTGGAAATGATGATCAATGCCGTAACA 1048927 30 96.7 30 .............................G TATAGATAAGACACAACTAACCACATCACA 1048987 30 100.0 30 .............................. TTCGCTACTCACCTGTTGTCGATTCCTTTA 1049047 30 93.3 31 ............................AC GTACCTTCAAATACAGAATACCCGTTTGTCG 1049108 30 96.7 30 ............................A. TTCCAAATAGCACGTTGCCTGAGTTCATCT 1049168 30 96.7 30 .............................A ACACCGCAATCGTATGTTGCAGCAGGTAAA 1049228 30 96.7 30 .............................G AATACAGCACCCCAACAGGTGAAACTATTC 1049288 30 96.7 30 .............................A CATGCGCGACAACACTTCAATTCAGATGAT 1049348 30 96.7 30 ............................A. TAGGTGAGAAGTGGCATGCGGACCATTTGG 1049408 30 96.7 30 ............................A. TACGAGTGCAAATTCTTTCCAAGGGTTAAT 1049468 30 93.3 30 ............................GC AAAAGCTCGCATCAATCGTGATCAAGTAAA 1049528 30 93.3 30 ............................GA AAGGCGGTTTTTTATTGCGTGGAGAAAAGT 1049588 30 100.0 30 .............................. TCAATAATGCAATCGACTGATATGCAATAC 1049648 30 100.0 30 .............................. GTGAACGCGTTTAGAACGCGCCACAGGTTT 1049708 30 96.7 30 .............................C AAACAAGATAGATTCGGACTTGGCGCATTT 1049768 30 96.7 30 ............................A. ATTTGGAGCGAATCGAAGAAAGCGCACGAA 1049828 30 93.3 30 ............................GA ATTTGAATAAAACAGCGTGTCAAAAATGGC 1049888 30 93.3 30 ............................AC TGGGGTGGGCTGTTGCAACTTTTATTTTTC 1049948 30 100.0 30 .............................. CAAGAGCATCGCATCACTGTCGTCATTCTC 1050008 30 93.3 30 ............................AA CATGGGAATGTTGTGTACCACTTTATCAAT 1050068 30 96.7 30 .............................G GTGTTAGACCTGGAACCAGGGATAAAAGCC 1050128 30 96.7 30 .............................G ATTATTAGGAAAAGATATGAGCCATATCAT 1050188 30 93.3 30 ............................AA TAACTGTTACGGACTGGTGGAATCGCTCAA 1050248 30 96.7 30 .............................C ATTAGTTAAAGTAATTTCACCGCTTTAGCG 1050308 30 96.7 30 ............................A. GAGAATACGCATGGCGTTCTTAGGATTACT 1050368 30 96.7 30 ............................A. ACGGATAACACTGATCTACCAGTACAAGAA 1050428 30 93.3 30 ............................AC CTCTTAGAACTTTTGCTACTTGGCTGACGT 1050488 30 93.3 30 ............................CA ATCAACAGTGCCTAGCAATTGCTCTACTGC 1050548 30 96.7 30 ............................C. AGCAATTGCTCTACTGCAATAGATAAAGCA 1050608 30 100.0 30 .............................. GTAAGGGATTTGATAATAAAATTCATTGAT 1050668 30 93.3 30 ............................GA CGACATCACAGATACTTCTGTATCTTTCTC 1050728 30 93.3 30 ............................AG AGACTTCATTTGTGTATTCAATGACTTCTT 1050788 30 96.7 30 ............................G. CTACAAAAATATGTCAATCGTGGTGCTGTT 1050848 30 100.0 30 .............................. AAGGCTGCCCCAGTTGATGGCTCTCTATGT 1050908 30 96.7 30 .............................A CGGTTGGTGCTGTCTCGAAAGTTCTTGCGC 1050968 30 96.7 30 .............................G AGTATTGCGACAACGATGGAAAAATGTCAC 1051028 30 96.7 31 .............................G ACAGGGAATACAAGGGTGATGATTTTGAAAT 1051089 30 96.7 30 ............................A. AGACCAGACACAGACACATCACTATTTACA 1051149 30 96.7 30 .............................G CTAACAATCAAATTGTCTATAAAACATCAT 1051209 30 93.3 30 ............................AA TAGTTCTCTAATTTCTTGTTGTGAATAATA 1051269 30 96.7 30 ............................C. GTGTTGTACATCGTTGCGAGAAATATTAAA 1051329 30 96.7 30 .............................C ATTAACGGCCAAGCGTGGACACGAGAGCAG 1051389 30 96.7 30 .............................C CTCCGCCACTTGGATGCGCGACATTTTATT 1051449 30 93.3 30 ............................AG TGAGAGTTTCTTTTCTTGATCTTGTTCAGT 1051509 30 96.7 30 ............................A. AAAAGCCCCGATTAATTGGAAAGGGGGCGA 1051569 30 100.0 30 .............................. ATCAAGGACGCCTTAAGAAGTATTGCTCAT 1051629 30 100.0 30 .............................. TGCTAGCTACACCCTTATTGATTAGATCAA 1051689 30 96.7 30 ............................A. GATGTATACAATGTTACGCGCATCTGAGAT 1051749 30 100.0 30 .............................. AACGATGTACAATCGCCTGATTTTGAGAAA 1051809 30 96.7 30 ............................A. CGAGCAATTGAACCTAGCATTTCCTCTGTA 1051869 30 93.3 30 ............................AA TAGAAATTGGATTCACTGCATCAACATTGG 1051929 30 96.7 30 ............................A. GGTGTGGAAGCGTTCTGAATCCATGCGAAT 1051989 30 93.3 30 ............................CA ATCAGAGCGAGCAACAGTAATTACTAGTGA 1052049 30 100.0 30 .............................. TTAAGTATTCACGTTCAGCAATAGTTAAAT 1052109 30 96.7 30 ............................G. GACGGAGAAGGGTGATGAAGAAATTAAACG 1052169 30 93.3 30 ............................AA AATGCGAATTAACTACGGCAAGAAGTTCAT 1052229 30 93.3 30 ............................AC CCGATAATGGCCGACCATTGTCGTCAAAGA 1052289 30 93.3 30 ............................AA TTTGTCAGTGTCTGCGGCGACTCATCAATA 1052349 30 93.3 30 ............................AA AATACTCACTCACTACTGCTGACAACGTAT 1052409 30 96.7 30 .............................C GAAAGTCATGGGATCAGATTGGAAAGATGC 1052469 30 96.7 30 ............................A. CGTCATAAGCATTTAATCGAATACCCTCAA 1052529 30 96.7 30 ............................A. CTAGTGTTATTGGGTGGGTAAAACGATTTA 1052589 30 96.7 30 .............................G TTTGACCTGAATCCAAAACCAAATTAAAAG 1052649 30 96.7 30 ............................G. ACAGGCTAATGTTAAGCCATGTCGGGTGGG 1052709 30 96.7 30 ............................A. TCGGGGGTGATGTGAGTAAGCAAAACGATA 1052769 30 100.0 30 .............................. CACCCCGACTTTGTAATTTCCTCCGACATT 1052829 30 96.7 30 .............................G ATTCAACGGGTGGCAAAAATAAAGCTGAAT 1052889 30 100.0 30 .............................. ACAGCGCAGGGATGTGCTGCGGGTATAGTA 1052949 30 93.3 30 ............................AG CAATTCATGGTATGGGTTTTATTAGCGAAT 1053009 30 93.3 30 .............C..............A. AAAGCAATATTGACCAATAAAAGTAAGCGT 1053069 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== =============================== ================== 163 30 96.3 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGTAAATGGCTAGAACGATTCATTGATTATGTTCATATCATTCAACCGAGAGAAGTACCTCAAGCTAAAGTTACTGGTCATGCACACTATTATCGAGTCAATCCAAAGATGGGGATTGAGGAACGTATAGTTCATCAAGCGCAACGTCGAAAAATTTCTTTGGATGAAGCTAAGCAACATTTTAAACAATATATTGAACAACCTATCATTGAGCCTTATGTGAGTTTAAAAAGTCTGAGTGCTAAACGAGAACAAAATATAGATCGACCATATCGTTTATATATTGGTAAATCTCTTGTTGATGAGGCAAAAGATGGAGAGTTTGGAACGTATGGACTAAGTCGAATGGCAACAGTTCCAGAATTTTGACCCAATATTTTTTTACTCTTTAACAGCTCAATAAAATCAATAAGTTACACCAAGTCATTTTTTGGTTGGGTAAATTGCTAAAAACCATCATAAATACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : ACATGTGATTTATTCATATGAGCCATTTAGAAATGTAACGGTCTTGATTGGCATTTGTTCTGTGTGTTCATTACGGAATTTATTTTAAGAATTAATAAGTGACTTATAATTCTTGTTCCAAAATTATCGTGTTATATGTCATTTAAAATACATAACATCAAGAAATATGATTCTTACTACATTCTAGATCTTTAATTTTTAAATAAGAAAATATACCCTGAAACTAACGTTTTTTTAGTGAAATTTTCATGCGTGGTTTATACCTCATCACCAATGATGATCCCATTCAGCTTCTTTTAGAAAAGTTAGAGGCTGCACTAGCTACTGGTCATATAGCTATTTTGCAATATCGTCGAAAAAAAATAGAAAAAATAAATCAACCATCTGAAGTGGAGTTGATCAAAGTCCTGAGTGAAAAATATCAAGTCCCTTTTGTCATTAATGATGATTTGGCGTTAGCAGAACAATTTGGTTTAGGTGTGCATCTAGGGCAGTCCGAT # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.24, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //