Array 1 33326-38694 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTLC01000031.1 Pseudoalteromonas sp. Z9A5 Scaffold31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 33326 28 100.0 32 ............................ TCATCGAAACGAAACAGAGAGTAAGTATGAAA 33386 28 100.0 32 ............................ TTCAACGCCTGAAAAATCACCTTGACCTGTAG 33446 28 100.0 32 ............................ TGTTCAAGAAGCGCCGATTGACCCGAAACGTG 33506 28 100.0 32 ............................ ACTACCTGAGAAACCATTGGGGTTATTAGATA 33566 28 100.0 32 ............................ CATTCGGGGTTGCCACAGTGTGGGCAATTATC 33626 28 100.0 32 ............................ ATCAACATTGAATGAAACGTTCTCAGTCTGAT 33686 28 100.0 32 ............................ AAGATATTCAACACCTTGCGGGCGTGGAATTA 33746 28 100.0 32 ............................ GCTACCGATTTCAGTCGCACCTTTACGGTCAT 33806 28 100.0 32 ............................ GTTCAGCTTCGACACGGAATCGACCACCGATA 33866 28 100.0 32 ............................ TTGCTGTGAATACGTTTGTCCCACGGTAAGTT 33926 28 100.0 32 ............................ ACTGTCATTAAACAAGAATTGAATCTCAGCTA 33986 28 100.0 32 ............................ GCTTAATGGTATCGTTAAACTCATTAGAATAA 34046 28 100.0 32 ............................ TGATAACGTGCCAGCTTTACCGAGTATAGCTT 34106 28 100.0 32 ............................ GAAGAAGTCAAGAGTTTGACGCCCTCGCAGCT 34166 28 100.0 32 ............................ ACGTTTGAAAGCTGTGTTAGCTGTGTTGTTAC 34226 28 100.0 32 ............................ GTACAACCCACCCATGTAGCTGCACTTGACGC 34286 28 100.0 32 ............................ TGTCAACTTGCTCACTAGTCATTAGCAACACC 34346 28 100.0 32 ............................ CAGGGTGAGCGTTAGCCGCCCCACCGCTTAAT 34406 28 100.0 32 ............................ TTGAGCTACTGTGTCAGGTATATCCACGAAGT 34466 28 100.0 32 ............................ TTGCTTGCTAAGTCGATTACAAAGTAAAAGCT 34526 28 100.0 32 ............................ ACCAAGCAAGCAGCAAGAGGTTTCAGATGAGT 34586 28 100.0 32 ............................ TGACCACTCACCCTCGTCAACCTCTGCGGTAT 34646 28 100.0 32 ............................ GAAATAATCACACTTGGTACACCGCTCAAAAT 34706 28 100.0 32 ............................ GTCCCAGTACATGCATCCGTCAAGCGGTGGAT 34766 28 100.0 32 ............................ ATTCAACCTTAGCTGCATCAATCGCCTTTGCA 34826 28 100.0 32 ............................ TACTGAAAGTATGGGCGAGCAGTTGTTCTATA 34886 28 100.0 32 ............................ GTTAGCGTCTAATAATCTCACAGTCATAGTAA 34946 28 100.0 32 ............................ AAGGAACAAACGTAAACGCGTCTGAACGGTTT 35006 28 100.0 32 ............................ TCAAGCGCGTCGGTGCAATCTGTCATTGGTAT 35066 28 100.0 32 ............................ TGATAAACCAGCGTGAGTATAACCCACAACGT 35126 28 100.0 32 ............................ GTGACGCAGCACGAGGAACTTATAGTTTCAGA 35186 28 100.0 32 ............................ TATTCTATCAAATGTTAATTCACCCTTATCAG 35246 28 100.0 33 ............................ ATCAAGTAACGCCATTTGAATGTTAGACTTCAT 35307 28 100.0 32 ............................ TATTGAAGGTACGATAGAGGAGGAAGGGGAGT 35367 28 100.0 32 ............................ CGTTGTAGGTGAAGCTCCCGTAAATACGCAGC 35427 28 100.0 32 ............................ ACATATTGAAGAAGATTTATGTGTGGGTGCTG 35487 28 100.0 32 ............................ TTGAAAATGATGATATGATTAAAGTTAAAAGC 35547 28 100.0 32 ............................ ACCAGGACTGCGCTTTAAGGTTAGCGAACTTA 35607 28 100.0 32 ............................ TTATAGTTGGTTATCACGCCAATAGCGAAAGA 35667 28 100.0 32 ............................ TGCAACCTACCTTCGATGGTCGTTATTGTAGC 35727 28 100.0 32 ............................ CGCAAGCGCATCTATCAAAACTACCAGCATCA 35787 28 100.0 32 ............................ TACACGCTGCGCCCGCTGTTTTCGCCCTCCCA 35847 28 100.0 32 ............................ AAGACTTCCCCCCTACGCATCATTTAGACTTT 35907 28 100.0 32 ............................ GTTAGAGACTGAAAAGCCGCCAACTGTATTGC 35967 28 100.0 32 ............................ GAGTGCATCGCGTGACGCTGCGAAGTCTGACG 36027 28 100.0 32 ............................ GTATATTGCGTCTCAAGCGATTTAATCAGCGG 36087 28 100.0 32 ............................ ACGATATACTTTTACGTACGCTCACTTTCGCA 36147 28 100.0 32 ............................ TAACTGCCTTTGCTGTGAAGTCATCACAACGA 36207 28 100.0 32 ............................ GTACGGCAAGTTGTTCACGTTAACTGTTATCA 36267 28 100.0 32 ............................ TTGCAATGGCTAACCCTATCCCATGGCGTGCA 36327 28 100.0 32 ............................ GCTAACTGGTCCAGTCAAACGACAAGCCAAGA 36387 28 100.0 32 ............................ GTCGTAGAGTCTCGCTATATATCGTTATAGCT 36447 28 100.0 32 ............................ TTCAAAGGTATTTATAGGATCACCGTTAGAGA 36507 28 100.0 32 ............................ TGTATTCTCATGGTTATACCCCATATCATACT 36567 28 100.0 32 ............................ TGAATGTGGTGGGCGTGGTTGGGGCGCTTTCG 36627 28 100.0 32 ............................ ATCGACGATAATAACGACGGTGAGAAGTACGA 36687 28 100.0 32 ............................ GGTGACGTGTAAAAACCCGCTTGCGTCGTATG 36747 28 100.0 32 ............................ TACAATGGTCGGTTCGGCTTTACGATGTACAG 36807 28 100.0 32 ............................ CGATTCAACTTGTTCACGATATGTATCGTTAT 36867 28 100.0 32 ............................ ATTTGCGTAGGATGATTATTCGTAGCGTCTTT 36927 28 100.0 32 ............................ GAACATATCAGGGTAAACCATATCGAGGTCGA 36987 28 100.0 32 ............................ GCATTATTACGCTGTATGTTCGCTTTAATTTT 37047 28 100.0 32 ............................ TATTTGGTTTCTTTATCTTCAATCGGTTTATC 37107 28 100.0 32 ............................ TTATAGCTCGTATCATTGACTGTTGCTTGATT 37167 28 100.0 32 ............................ AGCGGGCAATACAAGCCCAAAGAGCGCCGGCT 37227 28 100.0 32 ............................ ACACGTCAACCATCAAGCTATTCATGTCCGCA 37287 28 100.0 32 ............................ AAGCGCAGACGAGAATGAAATCGCTGCGTTTG 37347 28 100.0 32 ............................ TTATTGTGTAGTTACGCCGCGTTAGCTTACGA 37407 28 100.0 32 ............................ TCCCACTTATTAGCGTGCTTACTTAACAGGCT 37467 28 100.0 32 ............................ TGCTGGTGGTGAGAGTAGAGCTACAATAAATA 37527 28 100.0 32 ............................ GTAACAACCCTGCGGTTGAAGTACCGACTGAA 37587 28 100.0 32 ............................ TTCAAGCAACCGTAAAGCTCTACCGAATTGTT 37647 28 100.0 32 ............................ TTTGTCGGCTGCACTTTAACTGTTCGCGGCTT 37707 28 100.0 32 ............................ ACTTTGGGCGCTTTGTATTGCTTCACTATATA 37767 28 100.0 32 ............................ TGCTTGTGCATTTAATAGAGCATAAATATCAT 37827 28 100.0 32 ............................ GTTAGTGGTCGGATGGGCGAATGAGCGTAACC 37887 28 100.0 33 ............................ AGATCACGACTACCAGCGTTAAACTTGCTGTAT 37948 28 100.0 32 ............................ ACGTTCCGATTTCACCAGTTGGTGGTGCTATC 38008 28 100.0 32 ............................ AGCAACCGAAAAGGAAATCGAAGAGTCTTTAA 38068 28 100.0 32 ............................ TCACCAACAAGTAACGGCGGGCGAATAATGCC 38128 28 100.0 32 ............................ TCTGATAACAGAGCCAGCGCCAACGCCAACGC 38188 28 100.0 32 ............................ CAAATCAGTTTGATATTATTGTTCTTGGTGTT 38248 28 100.0 32 ............................ ATAACAAGTACTGAACTTGATTTGGTTATGTG 38308 28 100.0 32 ............................ AAGAAAATAAAAGAGGCGGACGAGCTGCTTGC 38368 28 100.0 32 ............................ GTCACACGCTTCATATACTGCCGAGTAACCAG 38428 28 100.0 32 ............................ TCTAACGCGTTCTGTACAGTAGTAATACTACT 38488 28 100.0 32 ............................ GCACAAAGAAGCTTACAAGGCGCGTGACGAAG 38548 28 100.0 31 ............................ CTAAGTCGATAAAGTTATTATATAAAAATTA 38607 28 100.0 32 ............................ TCGTAGATGCCGTGGCATTTTATGCAAGTGCG 38667 28 92.9 0 ...........T.........C...... | ========== ====== ====== ====== ============================ ================================= ================== 90 28 99.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : ATCAAATCAATAAAGCCAGTGCCAGAAAACGTGACTTATGCAGCTTTTATTCGGATGCAAGTAAAAGGTGAGGCGCGAATAGAAAAAGATATGCTCAGTAAAGCACAGCGTTGGGCTGAAAAGTCAGGGCAACCGCTTAATGCTTGCCTAGCAGAGCTTGAAAAAAGCAAACCTAAAGCTAATAACAAATTACCTTTTATTTGGCTAGAAAGCCAAGAAACGAGACAGCGAGACTTGAATGCAAGTAGGAAATTCCCATTGTTCATTAAAAAAGTAGAAGTTACGGAACAACAAGTTGGTACATTTAATTGTTATGGTTTAAGCACAAACCATAACATGAAAGAAAAGCTGGTTAGTATTCCCCAGTTTTAACCTTTATTTTTGCTCTTTAAAAATTAGAAGCTAAAACAGCAAGTTACAGTAAGCTATAAAAACAAGGTAAAAGTTCATATTTTGCTTTAATCAATTGTTGTAACTTGTTTTTTGCGTGATATTCTATT # Right flank : AAGTAGGGGGTTTAATTTAGCCAATTGTAGAAGAGATAAACATTGATGTATTAAAGTAGGGCAACGGTTAATTATGCGCCTGTCTTAAACTATGGTAATACTATTAGTGACACTAAGTAGTACTCTAATTTTTTAACATTACCCAAAATTATAGCTCACACAATAATTCAGGTTAACTCTCACAAGAACATGGTATAAAGCAGCAATGTCATACGACACTGCCGCTCAGTAATAATGATCGTGATAGTATTAAACGAATATCTTTACTTCTTAATCTTGCCCTTAAGTACATAAATCTCGCCATCGAAACTGCCTTGAATTGTTAGCCCTTGGCTCGCCAACTCTTGCAAATATTCAATATGATCTGTAGTGATATGCTGACCCGGTACCAAAAGCGGAATGCCTGGTGGATATGGGGTGACTAAACCTGCGCAAATACGGTTGTTGCTTTTGCTGATTGGCACAGATTCGCGATCGCCATAAAAAGCGTCGCTTGGAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //